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The map label for this gene is fdhE [H]

Identifier: 78222224

GI number: 78222224

Start: 1118547

End: 1119389

Strand: Direct

Name: fdhE [H]

Synonym: Gmet_1004

Alternate gene names: 78222224

Gene position: 1118547-1119389 (Clockwise)

Preceding gene: 78222222

Following gene: 78222225

Centisome position: 27.98

GC content: 65.72

Gene sequence:

>843_bases
ATGCCACGAGCCGCCGAAAAGAAGGCCTTTGTCGATACGCTGTGCCGCGAGAATCCCGAGTACACCGAGGTGCTCGCCAT
CTTCAGCGAGTTGTATGCCGCCATCGAGGGGAAGGAGGGGGAGACCGGCCTGACGGTCACTCTGCCGGAGAGCCCTGCGG
CCGACCGCTTGCGTGACGGGGTCCCTCTCATCTCCTTCGATGCCATTGCCGTTGACCGCGAGAAGGCGCTGGCGTTCATC
GGCACGGTGATTGACGTGATGCAGCGGATGGGGAATGACGGCGGCGAGAGCCTGGAGCGTCTCCGGGCCGCACTTGCGGA
AGGAGAGGCCGACCTGCTGGCGCTTCTGCGGGGTGTCTTGGCCCACGAGCGGAGGGTGATTCTCGAAACGGCCCTGGCGG
TCCGCATCGACCCGGGGCTCGTGGAATTTGCCTTCCACACTCCCCTGAGGGTTGCCCTTGAGCAGGTGGCCGAAGGGGTC
GACCCTGGGCTCTATGCCGGCTGGAACAAGCACTTCTGCCCGGTCTGCGGTTCCCCCGCCGCCATGGCCGAACTGGTGGG
GGATGAGGGGGAGCGCCACCTTTCCTGCTCCACCTGTTTCAGCCGCTGGACCTACAACCAGCCAAACTGCCCCTTCTGCG
GCAACGACGACCCGGAACAACTCACTCATTTCACCACGGGCGAAGGCCCTCACCGGGTTGATATCTGCCTTGCCTGCTCC
CAGTACCTGAAGACCCGCCTTTCCCCCACGGGGAGCGCCGGCGTGCCGCCGGAACAGGATGACCTCGCCACCGTGCTCCT
GGATCTGCTGGCGGCCCAGGAAGGGTACCGGCGGGGGAGGTGA

Upstream 100 bases:

>100_bases
AGTGACGGTTTTGTCCTCCGGAAGGTTGCGGTAAACGGCAAAGAAAGGTAATAGTGGAGGGCAACGCTGTGATTCTCTCC
TGAAAGGAAAACCATCCGCC

Downstream 100 bases:

>100_bases
TCCGGTTGCCGACCCCTCGGTGTTACCATTCTATATTTTGCCCTTTTTCAACAGGCTTCCTTCTGTTTTAATACTTCAAC
ATTGCCCGGCCCTGGGGCGA

Product: formate dehydrogenase formation protein FdhE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MPRAAEKKAFVDTLCRENPEYTEVLAIFSELYAAIEGKEGETGLTVTLPESPAADRLRDGVPLISFDAIAVDREKALAFI
GTVIDVMQRMGNDGGESLERLRAALAEGEADLLALLRGVLAHERRVILETALAVRIDPGLVEFAFHTPLRVALEQVAEGV
DPGLYAGWNKHFCPVCGSPAAMAELVGDEGERHLSCSTCFSRWTYNQPNCPFCGNDDPEQLTHFTTGEGPHRVDICLACS
QYLKTRLSPTGSAGVPPEQDDLATVLLDLLAAQEGYRRGR

Sequences:

>Translated_280_residues
MPRAAEKKAFVDTLCRENPEYTEVLAIFSELYAAIEGKEGETGLTVTLPESPAADRLRDGVPLISFDAIAVDREKALAFI
GTVIDVMQRMGNDGGESLERLRAALAEGEADLLALLRGVLAHERRVILETALAVRIDPGLVEFAFHTPLRVALEQVAEGV
DPGLYAGWNKHFCPVCGSPAAMAELVGDEGERHLSCSTCFSRWTYNQPNCPFCGNDDPEQLTHFTTGEGPHRVDICLACS
QYLKTRLSPTGSAGVPPEQDDLATVLLDLLAAQEGYRRGR
>Mature_279_residues
PRAAEKKAFVDTLCRENPEYTEVLAIFSELYAAIEGKEGETGLTVTLPESPAADRLRDGVPLISFDAIAVDREKALAFIG
TVIDVMQRMGNDGGESLERLRAALAEGEADLLALLRGVLAHERRVILETALAVRIDPGLVEFAFHTPLRVALEQVAEGVD
PGLYAGWNKHFCPVCGSPAAMAELVGDEGERHLSCSTCFSRWTYNQPNCPFCGNDDPEQLTHFTTGEGPHRVDICLACSQ
YLKTRLSPTGSAGVPPEQDDLATVLLDLLAAQEGYRRGR

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006452 [H]

Pfam domain/function: PF04216 FdhE [H]

EC number: NA

Molecular weight: Translated: 30412; Mature: 30281

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAAEKKAFVDTLCRENPEYTEVLAIFSELYAAIEGKEGETGLTVTLPESPAADRLRDG
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCC
VPLISFDAIAVDREKALAFIGTVIDVMQRMGNDGGESLERLRAALAEGEADLLALLRGVL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
AHERRVILETALAVRIDPGLVEFAFHTPLRVALEQVAEGVDPGLYAGWNKHFCPVCGSPA
HHHHHHHHHHHHHHEECCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
AMAELVGDEGERHLSCSTCFSRWTYNQPNCPFCGNDDPEQLTHFTTGEGPHRVDICLACS
HHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHH
QYLKTRLSPTGSAGVPPEQDDLATVLLDLLAAQEGYRRGR
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRAAEKKAFVDTLCRENPEYTEVLAIFSELYAAIEGKEGETGLTVTLPESPAADRLRDG
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCC
VPLISFDAIAVDREKALAFIGTVIDVMQRMGNDGGESLERLRAALAEGEADLLALLRGVL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
AHERRVILETALAVRIDPGLVEFAFHTPLRVALEQVAEGVDPGLYAGWNKHFCPVCGSPA
HHHHHHHHHHHHHHEECCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
AMAELVGDEGERHLSCSTCFSRWTYNQPNCPFCGNDDPEQLTHFTTGEGPHRVDICLACS
HHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHH
QYLKTRLSPTGSAGVPPEQDDLATVLLDLLAAQEGYRRGR
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]