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The map label for this gene is yigC [C]

Identifier: 78222213

GI number: 78222213

Start: 1101979

End: 1103817

Strand: Direct

Name: yigC [C]

Synonym: Gmet_0993

Alternate gene names: 78222213

Gene position: 1101979-1103817 (Clockwise)

Preceding gene: 78222212

Following gene: 78222214

Centisome position: 27.57

GC content: 66.94

Gene sequence:

>1839_bases
ATGGGCTATCGTAACCTGCAGGATTGCGTCTTTGACCTGGAAGCACGCGGCGATCTCGTCCGTATTGATGTGGAGACCGA
CCCGAACATCGAGATCGGTGCCATCCAGCGCCGGGTCTACCAGGCAGGGGGGCCGGCGCTCCTCTTCACCCGGGTCAAGG
GGTGCCGTTTTCCCATGCTTGGCAACCTCTTCGGCACCATGGCCCGGACCAAGTTCATCTTCCGGGACACCCTGGACGAC
ATCCGCCGTCTCGTGGAGCTGAAGATCAACCCGACCGCCGTGCTGAAAAATCCCAAGGAATACGCGGGGGCCCCCCTGGC
GGCGCTCCGGCTCCTTCCGCGCCAGGTCTCCCGGGGGCCGATTCTCGGCCACCGCACCACCATCGCCGAACTCCCCCAGC
TTAAATCGTGGCCCATGGACGGCGGCCCCTTCGTGACCCTCCCCCAGGTCTACTCCGAGAGCCCCAAGCGCCCCGGCTTC
CGTTTCTCGAACCTGGGGATGTACCGGGTGCAGTTGGCCGGCAACGATTACCGCCTGAACGAAGAAGTGGGGGTCCACTA
CCAGATCCACCGGGGTATCGGCGTCCACCACGCCGAGGCCATCGAACGGGGCGAGCCCCTGCGCGTCAATATCTTCGTGG
GAGGAGCGCCATCCATGACCGTGGCCGCGGTCATGCCCCTTCCTGAGGGACTTCCCGAGCTTTCCTTTGCCGGCCTCCTT
GCCGGGCACCGGCTGGCCATGGTCTGCCGACGGGGGGAACTCCCCATGCCTGCCGAGGCCGACTTCGTCATCACCGGCAC
CATCGACCCGAACAAGACCCTCCCCGAAGGTCCCTTCGGCGATCACCTGGGGTACTACAGCCTGGCCCATCCCTTCCCGG
TTCTGCGGGTGGAGAACGTCTGGCACCGGGACGACGCCATCTGGCCCTTCACCTCCGTCGGCCGCCCCCCCCAGGAGGAC
ACCACCTTCGGTGCCTTCATCCACGAGCTGACCGGCGCCCTCATTCCCGAGGTCCTTCCCGGGGTGAAGGGGGTCCATGC
CGTGGACGCCGCCGGCGTCCACCCCCTGCTCCTGGCCGTGGGGAGCGAGCGCTACGTCCCCTACGAGGCCGAGCGGGTGC
CGCGGGAACTCCTCACCATCGCCAGCGCCATCCTGGGGAACGGTCAGCTCTCCCTGGCCAAGTACCTCTTCATCACCCCC
AATGAGGACAACCCGCCGGACATCCACCACATCGACGAGTTCCTCACCTTCATCCTGGAGCGGGCCGACTGGCGGCGCGA
CCTCCACTTCCACACCCGCACCACCATCGACACCCTCGACTACTCGGGGAGCGGCCTCAACGAAGGGTCCAAAGTCATCG
TGGCCGCGGCAGGCCCGAAGCGGCGCGACCTTCCCACGGAGGTGCCAGGAGGGCTCCGGCTTCCGGACGGTTTCACCACC
CCCCATGTCTGTCTTCCCGGCATCCTGGCCGTCACCGGTCCGGCCTTCCCCGGCTACGGGGACAACGGCGCACCGGACAT
GGAGCGCTTCTGCGCCTCCTTCGCCCCCGATGACCCGATCAACCGCTTCCCCCTGGTGGTGATCGTTGACGACAGCGCCT
TTACTTCCCGTACCCTCAACAATTTCCTCTGGGTCACCTTCACCCGCTCCAACCCTGCCGCCGACATCCACGGCATCGGC
TCGTCGGTCCGGTGCAAGCACTGGGGATGCGGGGGGGCGCTCGTCATCGACGCCCGGGTGAAGCCCCATCACGCGCCGCC
GCTTCTGGATGTGCCGGAGATCGAGCGGCGAGTCGATGCCCTCGGCGCGCCCGGCGGGCCGCTGCGCGGAATTATTTGA

Upstream 100 bases:

>100_bases
GCGCATTTCCTTTCGCAAGTCCCCGGTTGACTTGAAGGCGGTGTGGCTTTAAAGTCGTACGATTGCTCTGACGAGTTGAA
CAAAGGAGGCCCCCGGAACC

Downstream 100 bases:

>100_bases
GCGAGATGGCGAGGGACTGAGGAGTGAGGGGAAGAAAAAAACGGATGCCGGCACGACCCGGCGCCGCCAGGGAGCGGATA
CGTTCGACCGCGGCACCTGC

Product: carboxylyase-like protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MGYRNLQDCVFDLEARGDLVRIDVETDPNIEIGAIQRRVYQAGGPALLFTRVKGCRFPMLGNLFGTMARTKFIFRDTLDD
IRRLVELKINPTAVLKNPKEYAGAPLAALRLLPRQVSRGPILGHRTTIAELPQLKSWPMDGGPFVTLPQVYSESPKRPGF
RFSNLGMYRVQLAGNDYRLNEEVGVHYQIHRGIGVHHAEAIERGEPLRVNIFVGGAPSMTVAAVMPLPEGLPELSFAGLL
AGHRLAMVCRRGELPMPAEADFVITGTIDPNKTLPEGPFGDHLGYYSLAHPFPVLRVENVWHRDDAIWPFTSVGRPPQED
TTFGAFIHELTGALIPEVLPGVKGVHAVDAAGVHPLLLAVGSERYVPYEAERVPRELLTIASAILGNGQLSLAKYLFITP
NEDNPPDIHHIDEFLTFILERADWRRDLHFHTRTTIDTLDYSGSGLNEGSKVIVAAAGPKRRDLPTEVPGGLRLPDGFTT
PHVCLPGILAVTGPAFPGYGDNGAPDMERFCASFAPDDPINRFPLVVIVDDSAFTSRTLNNFLWVTFTRSNPAADIHGIG
SSVRCKHWGCGGALVIDARVKPHHAPPLLDVPEIERRVDALGAPGGPLRGII

Sequences:

>Translated_612_residues
MGYRNLQDCVFDLEARGDLVRIDVETDPNIEIGAIQRRVYQAGGPALLFTRVKGCRFPMLGNLFGTMARTKFIFRDTLDD
IRRLVELKINPTAVLKNPKEYAGAPLAALRLLPRQVSRGPILGHRTTIAELPQLKSWPMDGGPFVTLPQVYSESPKRPGF
RFSNLGMYRVQLAGNDYRLNEEVGVHYQIHRGIGVHHAEAIERGEPLRVNIFVGGAPSMTVAAVMPLPEGLPELSFAGLL
AGHRLAMVCRRGELPMPAEADFVITGTIDPNKTLPEGPFGDHLGYYSLAHPFPVLRVENVWHRDDAIWPFTSVGRPPQED
TTFGAFIHELTGALIPEVLPGVKGVHAVDAAGVHPLLLAVGSERYVPYEAERVPRELLTIASAILGNGQLSLAKYLFITP
NEDNPPDIHHIDEFLTFILERADWRRDLHFHTRTTIDTLDYSGSGLNEGSKVIVAAAGPKRRDLPTEVPGGLRLPDGFTT
PHVCLPGILAVTGPAFPGYGDNGAPDMERFCASFAPDDPINRFPLVVIVDDSAFTSRTLNNFLWVTFTRSNPAADIHGIG
SSVRCKHWGCGGALVIDARVKPHHAPPLLDVPEIERRVDALGAPGGPLRGII
>Mature_611_residues
GYRNLQDCVFDLEARGDLVRIDVETDPNIEIGAIQRRVYQAGGPALLFTRVKGCRFPMLGNLFGTMARTKFIFRDTLDDI
RRLVELKINPTAVLKNPKEYAGAPLAALRLLPRQVSRGPILGHRTTIAELPQLKSWPMDGGPFVTLPQVYSESPKRPGFR
FSNLGMYRVQLAGNDYRLNEEVGVHYQIHRGIGVHHAEAIERGEPLRVNIFVGGAPSMTVAAVMPLPEGLPELSFAGLLA
GHRLAMVCRRGELPMPAEADFVITGTIDPNKTLPEGPFGDHLGYYSLAHPFPVLRVENVWHRDDAIWPFTSVGRPPQEDT
TFGAFIHELTGALIPEVLPGVKGVHAVDAAGVHPLLLAVGSERYVPYEAERVPRELLTIASAILGNGQLSLAKYLFITPN
EDNPPDIHHIDEFLTFILERADWRRDLHFHTRTTIDTLDYSGSGLNEGSKVIVAAAGPKRRDLPTEVPGGLRLPDGFTTP
HVCLPGILAVTGPAFPGYGDNGAPDMERFCASFAPDDPINRFPLVVIVDDSAFTSRTLNNFLWVTFTRSNPAADIHGIGS
SVRCKHWGCGGALVIDARVKPHHAPPLLDVPEIERRVDALGAPGGPLRGII

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=472, Percent_Identity=30.2966101694915, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320748, Length=346, Percent_Identity=28.3236994219653, Blast_Score=100, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 67019; Mature: 66888

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRNLQDCVFDLEARGDLVRIDVETDPNIEIGAIQRRVYQAGGPALLFTRVKGCRFPML
CCCCCHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCHH
GNLFGTMARTKFIFRDTLDDIRRLVELKINPTAVLKNPKEYAGAPLAALRLLPRQVSRGP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCHHHHCCCHHHHHHHHHHHCCCC
ILGHRTTIAELPQLKSWPMDGGPFVTLPQVYSESPKRPGFRFSNLGMYRVQLAGNDYRLN
CCCCCCHHHHCCCCCCCCCCCCCEEEECHHHCCCCCCCCCEECCCCEEEEEECCCCEEEC
EEVGVHYQIHRGIGVHHAEAIERGEPLRVNIFVGGAPSMTVAAVMPLPEGLPELSFAGLL
CCCCEEEEEECCCCCHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHH
AGHRLAMVCRRGELPMPAEADFVITGTIDPNKTLPEGPFGDHLGYYSLAHPFPVLRVENV
HCCHHEEHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCC
WHRDDAIWPFTSVGRPPQEDTTFGAFIHELTGALIPEVLPGVKGVHAVDAAGVHPLLLAV
CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEE
GSERYVPYEAERVPRELLTIASAILGNGQLSLAKYLFITPNEDNPPDIHHIDEFLTFILE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH
RADWRRDLHFHTRTTIDTLDYSGSGLNEGSKVIVAAAGPKRRDLPTEVPGGLRLPDGFTT
HHHHHHCCEEEECCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PHVCLPGILAVTGPAFPGYGDNGAPDMERFCASFAPDDPINRFPLVVIVDDSAFTSRTLN
CHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHC
NFLWVTFTRSNPAADIHGIGSSVRCKHWGCGGALVIDARVKPHHAPPLLDVPEIERRVDA
CEEEEEEECCCCCCCEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH
LGAPGGPLRGII
CCCCCCCCCCCC
>Mature Secondary Structure 
GYRNLQDCVFDLEARGDLVRIDVETDPNIEIGAIQRRVYQAGGPALLFTRVKGCRFPML
CCCCHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCHH
GNLFGTMARTKFIFRDTLDDIRRLVELKINPTAVLKNPKEYAGAPLAALRLLPRQVSRGP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCHHHHCCCHHHHHHHHHHHCCCC
ILGHRTTIAELPQLKSWPMDGGPFVTLPQVYSESPKRPGFRFSNLGMYRVQLAGNDYRLN
CCCCCCHHHHCCCCCCCCCCCCCEEEECHHHCCCCCCCCCEECCCCEEEEEECCCCEEEC
EEVGVHYQIHRGIGVHHAEAIERGEPLRVNIFVGGAPSMTVAAVMPLPEGLPELSFAGLL
CCCCEEEEEECCCCCHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHH
AGHRLAMVCRRGELPMPAEADFVITGTIDPNKTLPEGPFGDHLGYYSLAHPFPVLRVENV
HCCHHEEHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCC
WHRDDAIWPFTSVGRPPQEDTTFGAFIHELTGALIPEVLPGVKGVHAVDAAGVHPLLLAV
CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEE
GSERYVPYEAERVPRELLTIASAILGNGQLSLAKYLFITPNEDNPPDIHHIDEFLTFILE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH
RADWRRDLHFHTRTTIDTLDYSGSGLNEGSKVIVAAAGPKRRDLPTEVPGGLRLPDGFTT
HHHHHHCCEEEECCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PHVCLPGILAVTGPAFPGYGDNGAPDMERFCASFAPDDPINRFPLVVIVDDSAFTSRTLN
CHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHC
NFLWVTFTRSNPAADIHGIGSSVRCKHWGCGGALVIDARVKPHHAPPLLDVPEIERRVDA
CEEEEEEECCCCCCCEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH
LGAPGGPLRGII
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]