| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is paaK [H]
Identifier: 78222170
GI number: 78222170
Start: 1053762
End: 1055063
Strand: Direct
Name: paaK [H]
Synonym: Gmet_0950
Alternate gene names: 78222170
Gene position: 1053762-1055063 (Clockwise)
Preceding gene: 78222169
Following gene: 78222171
Centisome position: 26.36
GC content: 65.67
Gene sequence:
>1302_bases ATGCTCACACGTTTTCCCGCCCCCTTTTCTTCCCCTGCCGACCTTGAACGGCTGCAGCTTGCCGGCGTGCAATGGACCGT CGCCCACGCCTGGAACAACTCCCCCTTCTACCGGGAGCGGTTCCAGCAGGCCGGCGTCTCGCCGGAGGATATCCGCACCC TCGACGACCTGCGCAGACTTCCCTTTACCACAGCCGATGACCTGCGGGCCGGCTATCCCTTTCCGCTCCGGTCGGCATCC TTTGAGGAGATTGTCCGGATCCACTCATCATCCGGTACTACCGGCAAGAGGAAGATCCTCTGCTACACCCAGAAGGATCT GGACGACTGGGCCCGGATGTTCTGCCGCTGCTACGAGCTGGCGGGGGTGACGCGGGAGGACCGGGTCCAGATCTGCGTCG GCTACGGGCTCTGGACCGCTGGAATCGGCTTCCAGGCCGCCTGCGAGCGCTACGGCGCCCTGGCTGTGCCGGTGGGGCCG GGGAACCTGGAACTCCAGACCACCTTCCTCACGGACGTCCAGTCCACGGTGGTCTGCTGCACCGCCTCCATGGGGCTGCT CCTGGCGGAGGAAGTCCAGCGGCGGGGGCTCAGGGACCGGATAAAGGTCAGGAAGGTGATTCTCGGGGCCGAGCGCTCCA GCGAGGCGATGCTCGCCAAAATCCGGGAGGGGCTCGGGGCGGAATCGGTTCACGATATCACCGGCCTCACCGAGGTCTAC GGCCCCGGCACCGGCCTTTCCTGTGCCGCTCCGGGGGCAAACGGCGCCGTCCACTACTGGGCCGACTACTATCTCCTCGA AATCCTTGATCCCGAAACCCTTCAGCCGGTGGCACCCGGGGAGGTGGGTGAGATGGTCTTCACGACCCTCCGCAAGGAGG CGGCGCCCCTCATTCGCTACCGCTCCCGGGACCTCACCCGGCTGATCCCCGGTGACTGCCCTTGCGGCTGCACGTTCCCC CGTCACGACCGGATTCTCGGCCGTTCCGACGACGTGGTCATCTTCCGCGGCGTCAACATCTACCCGGGGCAGATCGATGA GATTCTCGATACCGTGGCGGGGGTCGGGAGCGAATTCCAGGTAGTTCTCGACCATGGCGCCGACGGCCGCGACTACATGA CCATCCGCGTGGAGCGGGGCGAGGACGGTGCTCCGGCCGACGACCCGGCCCTTGCCCGAAAGGTCGCCTCTGCCGTCAAG CACAGCCTCATGGTTTCCTGTGAGGTGGTTGTCCTCCCCTACGGCGAGCTCCCCCGCTCGGAGGGGAAGACCAGAAGGAT GTATGACAACCGGAAGTACTAA
Upstream 100 bases:
>100_bases CTGGTCGAGAAGGGGAAGCTGCGGGACGCTTCCCTGGCGGCCCTTCGTCTGGGGATGGAGAATGCAGCAGGCTGATTTTC GTCCGGAGGTTTCATAAACG
Downstream 100 bases:
>100_bases CGGTGCTCAACATGCAACGATTGCGTGACGACATACGTTGAACGCCAGACTCGACACGGATTCTGTTGAGCATTTCACCC CTTTGTGCTACCGTTCTCCG
Product: phenylacetate-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MLTRFPAPFSSPADLERLQLAGVQWTVAHAWNNSPFYRERFQQAGVSPEDIRTLDDLRRLPFTTADDLRAGYPFPLRSAS FEEIVRIHSSSGTTGKRKILCYTQKDLDDWARMFCRCYELAGVTREDRVQICVGYGLWTAGIGFQAACERYGALAVPVGP GNLELQTTFLTDVQSTVVCCTASMGLLLAEEVQRRGLRDRIKVRKVILGAERSSEAMLAKIREGLGAESVHDITGLTEVY GPGTGLSCAAPGANGAVHYWADYYLLEILDPETLQPVAPGEVGEMVFTTLRKEAAPLIRYRSRDLTRLIPGDCPCGCTFP RHDRILGRSDDVVIFRGVNIYPGQIDEILDTVAGVGSEFQVVLDHGADGRDYMTIRVERGEDGAPADDPALARKVASAVK HSLMVSCEVVVLPYGELPRSEGKTRRMYDNRKY
Sequences:
>Translated_433_residues MLTRFPAPFSSPADLERLQLAGVQWTVAHAWNNSPFYRERFQQAGVSPEDIRTLDDLRRLPFTTADDLRAGYPFPLRSAS FEEIVRIHSSSGTTGKRKILCYTQKDLDDWARMFCRCYELAGVTREDRVQICVGYGLWTAGIGFQAACERYGALAVPVGP GNLELQTTFLTDVQSTVVCCTASMGLLLAEEVQRRGLRDRIKVRKVILGAERSSEAMLAKIREGLGAESVHDITGLTEVY GPGTGLSCAAPGANGAVHYWADYYLLEILDPETLQPVAPGEVGEMVFTTLRKEAAPLIRYRSRDLTRLIPGDCPCGCTFP RHDRILGRSDDVVIFRGVNIYPGQIDEILDTVAGVGSEFQVVLDHGADGRDYMTIRVERGEDGAPADDPALARKVASAVK HSLMVSCEVVVLPYGELPRSEGKTRRMYDNRKY >Mature_433_residues MLTRFPAPFSSPADLERLQLAGVQWTVAHAWNNSPFYRERFQQAGVSPEDIRTLDDLRRLPFTTADDLRAGYPFPLRSAS FEEIVRIHSSSGTTGKRKILCYTQKDLDDWARMFCRCYELAGVTREDRVQICVGYGLWTAGIGFQAACERYGALAVPVGP GNLELQTTFLTDVQSTVVCCTASMGLLLAEEVQRRGLRDRIKVRKVILGAERSSEAMLAKIREGLGAESVHDITGLTEVY GPGTGLSCAAPGANGAVHYWADYYLLEILDPETLQPVAPGEVGEMVFTTLRKEAAPLIRYRSRDLTRLIPGDCPCGCTFP RHDRILGRSDDVVIFRGVNIYPGQIDEILDTVAGVGSEFQVVLDHGADGRDYMTIRVERGEDGAPADDPALARKVASAVK HSLMVSCEVVVLPYGELPRSEGKTRRMYDNRKY
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=432, Percent_Identity=38.6574074074074, Blast_Score=306, Evalue=2e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 47889; Mature: 47889
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRFPAPFSSPADLERLQLAGVQWTVAHAWNNSPFYRERFQQAGVSPEDIRTLDDLRRL CCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHC PFTTADDLRAGYPFPLRSASFEEIVRIHSSSGTTGKRKILCYTQKDLDDWARMFCRCYEL CCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH AGVTREDRVQICVGYGLWTAGIGFQAACERYGALAVPVGPGNLELQTTFLTDVQSTVVCC HCCCCCCCEEEEEECCHHHHCCCHHHHHHHCCCEEEEECCCCEEEEEEEHHHHHHHHHHH TASMGLLLAEEVQRRGLRDRIKVRKVILGAERSSEAMLAKIREGLGAESVHDITGLTEVY HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHC GPGTGLSCAAPGANGAVHYWADYYLLEILDPETLQPVAPGEVGEMVFTTLRKEAAPLIRY CCCCCCEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RSRDLTRLIPGDCPCGCTFPRHDRILGRSDDVVIFRGVNIYPGQIDEILDTVAGVGSEFQ CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEE VVLDHGADGRDYMTIRVERGEDGAPADDPALARKVASAVKHSLMVSCEVVVLPYGELPRS EEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCC EGKTRRMYDNRKY CCCHHHCCCCCCC >Mature Secondary Structure MLTRFPAPFSSPADLERLQLAGVQWTVAHAWNNSPFYRERFQQAGVSPEDIRTLDDLRRL CCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHC PFTTADDLRAGYPFPLRSASFEEIVRIHSSSGTTGKRKILCYTQKDLDDWARMFCRCYEL CCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH AGVTREDRVQICVGYGLWTAGIGFQAACERYGALAVPVGPGNLELQTTFLTDVQSTVVCC HCCCCCCCEEEEEECCHHHHCCCHHHHHHHCCCEEEEECCCCEEEEEEEHHHHHHHHHHH TASMGLLLAEEVQRRGLRDRIKVRKVILGAERSSEAMLAKIREGLGAESVHDITGLTEVY HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHC GPGTGLSCAAPGANGAVHYWADYYLLEILDPETLQPVAPGEVGEMVFTTLRKEAAPLIRY CCCCCCEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RSRDLTRLIPGDCPCGCTFPRHDRILGRSDDVVIFRGVNIYPGQIDEILDTVAGVGSEFQ CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEE VVLDHGADGRDYMTIRVERGEDGAPADDPALARKVASAVKHSLMVSCEVVVLPYGELPRS EEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCC EGKTRRMYDNRKY CCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]