| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is iorA [H]
Identifier: 78222168
GI number: 78222168
Start: 1051389
End: 1053194
Strand: Direct
Name: iorA [H]
Synonym: Gmet_0948
Alternate gene names: 78222168
Gene position: 1051389-1053194 (Clockwise)
Preceding gene: 78222167
Following gene: 78222169
Centisome position: 26.3
GC content: 67.11
Gene sequence:
>1806_bases ATGCTGTTGCTCGGCAATGAAGCCATGGCCCACGGCCTTGTGGAGGCAGGATGCAACGTGGTGGCCTCCTATCCCGGTAC CCCCGCCTCGGAGATCCTTTCGTCCGTGGCCCAGTGGCGGGCCCGTTATGATCTCCCCATGCACGTGGAGTGGGCGGTGA ACGAGAAGGTGGCCCTGGAGATCGCCTATGCGGCGTCCCAGGCGGGACTGCGGGCCGCAACCGCCATGAAGCAGGTGGGG CTCAACGTGGCCTCCGACCCGTTCATGAGCGCCGCCTACCTGGGGGTAAAGGGGGGCTTTCTGGTCATCAGCGCCGACGA CCCCGGTCCCCACTCCTCCCAGACCGAGCAGGACAGCCGCCTCATGGCCATGGGCGCCAAGGTGCCGGTGCTGGACCCCG ACTCGCCGGAACAGGCCCGGGAGTTGGTGAAAGTCGGTTTCGAGCTCTCCGAGGCCTTCGAGATTCCGGTCATGCTCCGC CCCACCACCCGGGTCTGCCACGCCAACCAGGACATCCTCCCCGGTCCCGTGGCCCCATCGGACCGCAAAGCCCTTTTCGA GAAAAACCCGGCCCGCTGGGCCGCCACCCCCAAGTTTCGCCACCGTCTCCACCTGGAACTGGAGGAGAAGCTTGCAAAGA TCGCCGCCTGGGAGCCCACCGCTCCCCGGCTCCTTAATCCTGCTGCCCCGGCCCGTCGGGCCATCGTCGCCTCCGGCGTC GCCGCGGCCCATGCCCGCGAAGTGCTGAATGACCTGGGGCTCCGGGAGACGCTCCCCCTCTGGCAGGTGGTACAGCCCTA TCCGCTCCATGGGGACTTCGTGACCACTGTCCTCGAACAATACGACGAGATCCTCGTTCTCGAAGAGACCACCGGCGTCA TGGAACTGCAGTTAGCCGACCGCTACCGAGTCAAGGGGAAACGCTCGGGCTTCGTCCCCGAAGTGGGAGAGCTGTCGCCG GAGCTGATCGAGGGGCTCATTGCCTCCTTTGCCGGGATCGAAACCCCGGAAGCTCCCGCTCCCGCCGCCGAAGGGGGCCG CCGTCCGACCCTCTGCCCCGGCTGCCCCCACCGGGCCAGCTTCTATGCCATCAAGCGTGCCGCCCCCAAGGGAATCTTTC CGTCGGATATCGGCTGCTACACCCTCGGCATCAACCTGGGAGGCGTTGACACCGTCCTCTGCATGGGGGCAGCGGTCTCC CAGGCCTGCGGCTTCTACCACGCCCACAAGATCGGCGGCGAGGTTCCCGACATCGTCGCCACCATCGGCGATTCCACCTT CTTCCACGCCGGCATTCCCCCCCTCATCGACGCGGTAGTCCAGGATGCCCGGTTCGTCCTCGTGATCCTCGACAACGCCA CCACCGCCATGACCGGCAACCAGCCGACCCCGGCCTTGGGGTGGGGGGCTGGCGGGGTCCCCACGGCCACGGTCAACATG GAGGGGCTCGTGAGGGCCTGCGGGGTGAAGTTCTGCAAGGTGGGGCGCCCCGGCAACCTTCCGGCGTTCACCGACCTCAT GAAGGAAGCGGTCGCCTTTGCCCGGACCGACGGGCTTGCCGTGGTCATCGCCCGCCAGCCCTGCGTGGTGGACCGCACCT TCAAGGGGGACCGCCCGCCGCGGCGAAAGGTTGCCATCAGCGACGCCTGCAACGGCTGCCGTTACTGCACCACCCAGTTC GAATGCCCGGCCCTGGTCTATGACGAGGAGGAGAAGCGGGTCGCCATCGACACCCTCATCTGCACCGACTGCGGTGTCTG CATCGACGTCTGCCCGCGGCTGGCAATCGAGGAGGTGGGACAATGA
Upstream 100 bases:
>100_bases ATACCGGGTGGCGGTTTCGTGATTTCAGGTTGACAAACACCGGGCGAGTGCGGAGAATTCTCTGATTTTGCGTTGGGAGG AAAAGCAGGTGAGTGAACGA
Downstream 100 bases:
>100_bases CCGGTCAGCAGCTCATCATCAGTGGCGTCGGCGGCCAGGGAATCCTCTTCCTGACCCGCATCCTCGCCGAAACCGCTATC AGCCTGGGGATGCCGGTCAT
Product: indolepyruvate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALEIAYAASQAGLRAATAMKQVG LNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSRLMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLR PTTRVCHANQDILPGPVAPSDRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLADRYRVKGKRSGFVPEVGELSP ELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRASFYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVS QACGFYHAHKIGGEVPDIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPPRRKVAISDACNGCRYCTTQF ECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVGQ
Sequences:
>Translated_601_residues MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALEIAYAASQAGLRAATAMKQVG LNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSRLMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLR PTTRVCHANQDILPGPVAPSDRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLADRYRVKGKRSGFVPEVGELSP ELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRASFYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVS QACGFYHAHKIGGEVPDIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPPRRKVAISDACNGCRYCTTQF ECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVGQ >Mature_601_residues MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALEIAYAASQAGLRAATAMKQVG LNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSRLMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLR PTTRVCHANQDILPGPVAPSDRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLADRYRVKGKRSGFVPEVGELSP ELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRASFYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVS QACGFYHAHKIGGEVPDIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPPRRKVAISDACNGCRYCTTQF ECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVGQ
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 64259; Mature: 64259
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALE CEEECCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEE IAYAASQAGLRAATAMKQVGLNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSR EEEHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHEEECCCEEEEECCCCCCCCCCCCHHHH LMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLRPTTRVCHANQDILPGPVAPS HHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCEEECCCHHHHCCCCCCCCCCCCCC DRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV CHHHHHHCCCCCCCCCHHHHHEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLAD HHHHHHHHHHHCCCHHCCCHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEECH RYRVKGKRSGFVPEVGELSPELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRAS HHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH FYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVSQACGFYHAHKIGGEVPDIVA HHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM HHCCCCEEECCCHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEECH EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPP HHHHHHHCHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC RRKVAISDACNGCRYCTTQFECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVG CCEEEHHHHCCCCEEECCCCCCCEEEECCCCCEEEEHEEHHHCCCHHHHHHHHHHHHHHC Q C >Mature Secondary Structure MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALE CEEECCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEE IAYAASQAGLRAATAMKQVGLNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSR EEEHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHEEECCCEEEEECCCCCCCCCCCCHHHH LMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLRPTTRVCHANQDILPGPVAPS HHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCEEECCCHHHHCCCCCCCCCCCCCC DRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV CHHHHHHCCCCCCCCCHHHHHEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLAD HHHHHHHHHHHCCCHHCCCHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEECH RYRVKGKRSGFVPEVGELSPELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRAS HHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH FYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVSQACGFYHAHKIGGEVPDIVA HHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM HHCCCCEEECCCHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEECH EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPP HHHHHHHCHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC RRKVAISDACNGCRYCTTQFECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVG CCEEEHHHHCCCCEEECCCCCCCEEEECCCCCEEEEHEEHHHCCCHHHHHHHHHHHHHHC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]