Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is iorA [H]

Identifier: 78222168

GI number: 78222168

Start: 1051389

End: 1053194

Strand: Direct

Name: iorA [H]

Synonym: Gmet_0948

Alternate gene names: 78222168

Gene position: 1051389-1053194 (Clockwise)

Preceding gene: 78222167

Following gene: 78222169

Centisome position: 26.3

GC content: 67.11

Gene sequence:

>1806_bases
ATGCTGTTGCTCGGCAATGAAGCCATGGCCCACGGCCTTGTGGAGGCAGGATGCAACGTGGTGGCCTCCTATCCCGGTAC
CCCCGCCTCGGAGATCCTTTCGTCCGTGGCCCAGTGGCGGGCCCGTTATGATCTCCCCATGCACGTGGAGTGGGCGGTGA
ACGAGAAGGTGGCCCTGGAGATCGCCTATGCGGCGTCCCAGGCGGGACTGCGGGCCGCAACCGCCATGAAGCAGGTGGGG
CTCAACGTGGCCTCCGACCCGTTCATGAGCGCCGCCTACCTGGGGGTAAAGGGGGGCTTTCTGGTCATCAGCGCCGACGA
CCCCGGTCCCCACTCCTCCCAGACCGAGCAGGACAGCCGCCTCATGGCCATGGGCGCCAAGGTGCCGGTGCTGGACCCCG
ACTCGCCGGAACAGGCCCGGGAGTTGGTGAAAGTCGGTTTCGAGCTCTCCGAGGCCTTCGAGATTCCGGTCATGCTCCGC
CCCACCACCCGGGTCTGCCACGCCAACCAGGACATCCTCCCCGGTCCCGTGGCCCCATCGGACCGCAAAGCCCTTTTCGA
GAAAAACCCGGCCCGCTGGGCCGCCACCCCCAAGTTTCGCCACCGTCTCCACCTGGAACTGGAGGAGAAGCTTGCAAAGA
TCGCCGCCTGGGAGCCCACCGCTCCCCGGCTCCTTAATCCTGCTGCCCCGGCCCGTCGGGCCATCGTCGCCTCCGGCGTC
GCCGCGGCCCATGCCCGCGAAGTGCTGAATGACCTGGGGCTCCGGGAGACGCTCCCCCTCTGGCAGGTGGTACAGCCCTA
TCCGCTCCATGGGGACTTCGTGACCACTGTCCTCGAACAATACGACGAGATCCTCGTTCTCGAAGAGACCACCGGCGTCA
TGGAACTGCAGTTAGCCGACCGCTACCGAGTCAAGGGGAAACGCTCGGGCTTCGTCCCCGAAGTGGGAGAGCTGTCGCCG
GAGCTGATCGAGGGGCTCATTGCCTCCTTTGCCGGGATCGAAACCCCGGAAGCTCCCGCTCCCGCCGCCGAAGGGGGCCG
CCGTCCGACCCTCTGCCCCGGCTGCCCCCACCGGGCCAGCTTCTATGCCATCAAGCGTGCCGCCCCCAAGGGAATCTTTC
CGTCGGATATCGGCTGCTACACCCTCGGCATCAACCTGGGAGGCGTTGACACCGTCCTCTGCATGGGGGCAGCGGTCTCC
CAGGCCTGCGGCTTCTACCACGCCCACAAGATCGGCGGCGAGGTTCCCGACATCGTCGCCACCATCGGCGATTCCACCTT
CTTCCACGCCGGCATTCCCCCCCTCATCGACGCGGTAGTCCAGGATGCCCGGTTCGTCCTCGTGATCCTCGACAACGCCA
CCACCGCCATGACCGGCAACCAGCCGACCCCGGCCTTGGGGTGGGGGGCTGGCGGGGTCCCCACGGCCACGGTCAACATG
GAGGGGCTCGTGAGGGCCTGCGGGGTGAAGTTCTGCAAGGTGGGGCGCCCCGGCAACCTTCCGGCGTTCACCGACCTCAT
GAAGGAAGCGGTCGCCTTTGCCCGGACCGACGGGCTTGCCGTGGTCATCGCCCGCCAGCCCTGCGTGGTGGACCGCACCT
TCAAGGGGGACCGCCCGCCGCGGCGAAAGGTTGCCATCAGCGACGCCTGCAACGGCTGCCGTTACTGCACCACCCAGTTC
GAATGCCCGGCCCTGGTCTATGACGAGGAGGAGAAGCGGGTCGCCATCGACACCCTCATCTGCACCGACTGCGGTGTCTG
CATCGACGTCTGCCCGCGGCTGGCAATCGAGGAGGTGGGACAATGA

Upstream 100 bases:

>100_bases
ATACCGGGTGGCGGTTTCGTGATTTCAGGTTGACAAACACCGGGCGAGTGCGGAGAATTCTCTGATTTTGCGTTGGGAGG
AAAAGCAGGTGAGTGAACGA

Downstream 100 bases:

>100_bases
CCGGTCAGCAGCTCATCATCAGTGGCGTCGGCGGCCAGGGAATCCTCTTCCTGACCCGCATCCTCGCCGAAACCGCTATC
AGCCTGGGGATGCCGGTCAT

Product: indolepyruvate ferredoxin oxidoreductase subunit alpha

Products: NA

Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALEIAYAASQAGLRAATAMKQVG
LNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSRLMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLR
PTTRVCHANQDILPGPVAPSDRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV
AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLADRYRVKGKRSGFVPEVGELSP
ELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRASFYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVS
QACGFYHAHKIGGEVPDIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM
EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPPRRKVAISDACNGCRYCTTQF
ECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVGQ

Sequences:

>Translated_601_residues
MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALEIAYAASQAGLRAATAMKQVG
LNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSRLMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLR
PTTRVCHANQDILPGPVAPSDRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV
AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLADRYRVKGKRSGFVPEVGELSP
ELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRASFYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVS
QACGFYHAHKIGGEVPDIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM
EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPPRRKVAISDACNGCRYCTTQF
ECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVGQ
>Mature_601_residues
MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALEIAYAASQAGLRAATAMKQVG
LNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSRLMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLR
PTTRVCHANQDILPGPVAPSDRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV
AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLADRYRVKGKRSGFVPEVGELSP
ELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRASFYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVS
QACGFYHAHKIGGEVPDIVATIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM
EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPPRRKVAISDACNGCRYCTTQF
ECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVGQ

Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]

COG id: COG4231

COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017721
- InterPro:   IPR002880
- InterPro:   IPR011766
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.8 [H]

Molecular weight: Translated: 64259; Mature: 64259

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALE
CEEECCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEE
IAYAASQAGLRAATAMKQVGLNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSR
EEEHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHEEECCCEEEEECCCCCCCCCCCCHHHH
LMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLRPTTRVCHANQDILPGPVAPS
HHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCEEECCCHHHHCCCCCCCCCCCCCC
DRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV
CHHHHHHCCCCCCCCCHHHHHEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLAD
HHHHHHHHHHHCCCHHCCCHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEECH
RYRVKGKRSGFVPEVGELSPELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRAS
HHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
FYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVSQACGFYHAHKIGGEVPDIVA
HHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM
HHCCCCEEECCCHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEECH
EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPP
HHHHHHHCHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC
RRKVAISDACNGCRYCTTQFECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVG
CCEEEHHHHCCCCEEECCCCCCCEEEECCCCCEEEEHEEHHHCCCHHHHHHHHHHHHHHC
Q
C
>Mature Secondary Structure
MLLLGNEAMAHGLVEAGCNVVASYPGTPASEILSSVAQWRARYDLPMHVEWAVNEKVALE
CEEECCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEE
IAYAASQAGLRAATAMKQVGLNVASDPFMSAAYLGVKGGFLVISADDPGPHSSQTEQDSR
EEEHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHEEECCCEEEEECCCCCCCCCCCCHHHH
LMAMGAKVPVLDPDSPEQARELVKVGFELSEAFEIPVMLRPTTRVCHANQDILPGPVAPS
HHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCEEECCCHHHHCCCCCCCCCCCCCC
DRKALFEKNPARWAATPKFRHRLHLELEEKLAKIAAWEPTAPRLLNPAAPARRAIVASGV
CHHHHHHCCCCCCCCCHHHHHEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
AAAHAREVLNDLGLRETLPLWQVVQPYPLHGDFVTTVLEQYDEILVLEETTGVMELQLAD
HHHHHHHHHHHCCCHHCCCHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEECH
RYRVKGKRSGFVPEVGELSPELIEGLIASFAGIETPEAPAPAAEGGRRPTLCPGCPHRAS
HHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
FYAIKRAAPKGIFPSDIGCYTLGINLGGVDTVLCMGAAVSQACGFYHAHKIGGEVPDIVA
HHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TIGDSTFFHAGIPPLIDAVVQDARFVLVILDNATTAMTGNQPTPALGWGAGGVPTATVNM
HHCCCCEEECCCHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEECH
EGLVRACGVKFCKVGRPGNLPAFTDLMKEAVAFARTDGLAVVIARQPCVVDRTFKGDRPP
HHHHHHHCHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC
RRKVAISDACNGCRYCTTQFECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEEVG
CCEEEHHHHCCCCEEECCCCCCCEEEECCCCCEEEEHEEHHHCCCHHHHHHHHHHHHHHC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]