| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ppnK
Identifier: 78222161
GI number: 78222161
Start: 1044743
End: 1045594
Strand: Direct
Name: ppnK
Synonym: Gmet_0941
Alternate gene names: 78222161
Gene position: 1044743-1045594 (Clockwise)
Preceding gene: 78222157
Following gene: 78222162
Centisome position: 26.14
GC content: 63.38
Gene sequence:
>852_bases ATGAAAAAAATCGCCATCTTCGCCAAGGTTCACGACCCCCGTTGCCAGGGAGTGGCAGGGGAACTGATCACCTGGCTCGA GCAGCGGAGGATCGTTCCGCTCGTTGAAGCCCATTTTGCCCGCCATCTGGGGCGATCGGGCGTTACCTCCGAAGAGATTC CCGACCTCGCTGACATGGCGGTGGTCCTGGGGGGGGACGGCACCCTCATCTCGGCCGCCCGGCTCCTGGGGGGGCGGGAA ATCCCCATTCTCGGCGTGAACCTGGGGAGCCTCGGCTTTCTGACCGAGGTCACCCTGGACGAGCTCTATCCAGCCCTTGA AGCATGCCTCGGCGGCGACTACCGGGTTTCGGAGCGGATGATGCTTGCCGCCACCGTGGAGCGGGGCGACGACATCGTCT TCTCCCACCGGGTTCTGAACGACGCGGTGATCAACAAGGGAGCCCTTGCGCGGATCGTCGACATGGAAAGTCTGGTCAAC GGCCACTACCTCACCACCTACAAGGCCGACGGCCTCATCATTTCGACCCCCACCGGCTCCACCGGCTACTGCCTCTCGGC CAATGGCCCCATCGTCCACCCGGACCTGGAATGCCTCACCATCACCCCCATCTGCCCCCATACCCTCACCAACCGTCCCA TCGTCCTGGAGGCCAGCGCTGAGGTAACCATCAGGCTCATCTCCAAGAATGAGGATGTCTACCTCACCCTCGACGGCCAG GTGGGGATGGAGCTCAAGTGCGGCGACATCATCCGGGTGCGCCGGGCCGAGCACCGCACGCGCCTCGTTATGTCGCGGAG CAAGGACTATTTCGAGGTTCTCAGGACCAAGCTCAAGTGGGGTGAGCGGTAG
Upstream 100 bases:
>100_bases GGAGAAGGCAGTACCCCCAAATGGCGGAATTCCATTGGACATGCCCCCTGATCTATGCTAGTAAATTCCATACTTATACC ACAATAACAGGGTCGGCACG
Downstream 100 bases:
>100_bases TGCTCATCGACCTCTCCATCAGAAACTTCGCCATCATCGATACTCTCCATGTTCCGTTCCAGCCGGGGCTTACGGTCTTT ACCGGCGAGACCGGCGCGGG
Product: ATP-NAD/AcoX kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKKIAIFAKVHDPRCQGVAGELITWLEQRRIVPLVEAHFARHLGRSGVTSEEIPDLADMAVVLGGDGTLISAARLLGGRE IPILGVNLGSLGFLTEVTLDELYPALEACLGGDYRVSERMMLAATVERGDDIVFSHRVLNDAVINKGALARIVDMESLVN GHYLTTYKADGLIISTPTGSTGYCLSANGPIVHPDLECLTITPICPHTLTNRPIVLEASAEVTIRLISKNEDVYLTLDGQ VGMELKCGDIIRVRRAEHRTRLVMSRSKDYFEVLRTKLKWGER
Sequences:
>Translated_283_residues MKKIAIFAKVHDPRCQGVAGELITWLEQRRIVPLVEAHFARHLGRSGVTSEEIPDLADMAVVLGGDGTLISAARLLGGRE IPILGVNLGSLGFLTEVTLDELYPALEACLGGDYRVSERMMLAATVERGDDIVFSHRVLNDAVINKGALARIVDMESLVN GHYLTTYKADGLIISTPTGSTGYCLSANGPIVHPDLECLTITPICPHTLTNRPIVLEASAEVTIRLISKNEDVYLTLDGQ VGMELKCGDIIRVRRAEHRTRLVMSRSKDYFEVLRTKLKWGER >Mature_283_residues MKKIAIFAKVHDPRCQGVAGELITWLEQRRIVPLVEAHFARHLGRSGVTSEEIPDLADMAVVLGGDGTLISAARLLGGRE IPILGVNLGSLGFLTEVTLDELYPALEACLGGDYRVSERMMLAATVERGDDIVFSHRVLNDAVINKGALARIVDMESLVN GHYLTTYKADGLIISTPTGSTGYCLSANGPIVHPDLECLTITPICPHTLTNRPIVLEASAEVTIRLISKNEDVYLTLDGQ VGMELKCGDIIRVRRAEHRTRLVMSRSKDYFEVLRTKLKWGER
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=262, Percent_Identity=31.2977099236641, Blast_Score=124, Evalue=8e-29, Organism=Escherichia coli, GI1788968, Length=286, Percent_Identity=34.6153846153846, Blast_Score=182, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6320794, Length=242, Percent_Identity=32.6446280991736, Blast_Score=147, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322509, Length=242, Percent_Identity=30.5785123966942, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6325068, Length=212, Percent_Identity=32.5471698113208, Blast_Score=123, Evalue=3e-29, Organism=Drosophila melanogaster, GI28573828, Length=254, Percent_Identity=33.4645669291339, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI28573832, Length=254, Percent_Identity=33.4645669291339, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI28573826, Length=254, Percent_Identity=33.4645669291339, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI28573830, Length=254, Percent_Identity=33.4645669291339, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI161077047, Length=254, Percent_Identity=33.4645669291339, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI20129957, Length=279, Percent_Identity=29.7491039426523, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI281363323, Length=279, Percent_Identity=29.7491039426523, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI281363321, Length=279, Percent_Identity=29.7491039426523, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24653422, Length=279, Percent_Identity=29.7491039426523, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24653424, Length=279, Percent_Identity=29.7491039426523, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_GEOMG (Q39X41)
Other databases:
- EMBL: CP000148 - RefSeq: YP_383908.1 - ProteinModelPortal: Q39X41 - SMR: Q39X41 - STRING: Q39X41 - GeneID: 3738511 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_0941 - NMPDR: fig|269799.3.peg.1016 - eggNOG: COG0061 - HOGENOM: HBG713904 - OMA: FESFMID - PhylomeDB: Q39X41 - ProtClustDB: CLSK828714 - BioCyc: GMET269799:GMET_0941-MONOMER - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 31072; Mature: 31072
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAIFAKVHDPRCQGVAGELITWLEQRRIVPLVEAHFARHLGRSGVTSEEIPDLADMA CCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCHHHEE VVLGGDGTLISAARLLGGREIPILGVNLGSLGFLTEVTLDELYPALEACLGGDYRVSERM EEECCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCEE MLAATVERGDDIVFSHRVLNDAVINKGALARIVDMESLVNGHYLTTYKADGLIISTPTGS EEEEEECCCCCEEEEHHHHHHHHHCCCHHHHHEEHHHHHCCCEEEEEECCCEEEECCCCC TGYCLSANGPIVHPDLECLTITPICPHTLTNRPIVLEASAEVTIRLISKNEDVYLTLDGQ CCEEEECCCCEECCCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEECCCCEEEEECCC VGMELKCGDIIRVRRAEHRTRLVMSRSKDYFEVLRTKLKWGER CCCEEECCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKIAIFAKVHDPRCQGVAGELITWLEQRRIVPLVEAHFARHLGRSGVTSEEIPDLADMA CCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCHHHEE VVLGGDGTLISAARLLGGREIPILGVNLGSLGFLTEVTLDELYPALEACLGGDYRVSERM EEECCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCEE MLAATVERGDDIVFSHRVLNDAVINKGALARIVDMESLVNGHYLTTYKADGLIISTPTGS EEEEEECCCCCEEEEHHHHHHHHHCCCHHHHHEEHHHHHCCCEEEEEECCCEEEECCCCC TGYCLSANGPIVHPDLECLTITPICPHTLTNRPIVLEASAEVTIRLISKNEDVYLTLDGQ CCEEEECCCCEECCCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEECCCCEEEEECCC VGMELKCGDIIRVRRAEHRTRLVMSRSKDYFEVLRTKLKWGER CCCEEECCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA