| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222127
Identifier: 78222127
GI number: 78222127
Start: 999939
End: 1000391
Strand: Direct
Name: 78222127
Synonym: Gmet_0907
Alternate gene names: NA
Gene position: 999939-1000391 (Clockwise)
Preceding gene: 78222126
Following gene: 78222128
Centisome position: 25.01
GC content: 59.6
Gene sequence:
>453_bases ATGAAAAGATCATGGGGAATATGGGCGCTGACGGCAGCACTGACCATCATGGCCCCATCGGCGGTTCCGGTTTCTCCGGC ATATGCCGCCGACGACCAGTGGGTGCTCCTCGACGAGGATCCCTCCACCTCCCGCTACTATTATGACACGACCTCCATCG TCCAGGATGATGAAGATAGTGTCACCGTCCGGACCAAGGCGGTCTACACCGCAGAGGGGAAGGCCGACGCCCTTGACACC ATCGGTCATCCCAAGGGGTTCGAGGACCTGGCCGACACGAATTTTTACTACACCATCAACTGCTCCGACGACATGAGCCG GCTGGAAAAGGTTGTCCACCGGGACAGCACGGGGAGGACCATCAAGGAGTACCTCCTCGCCGGCAAGACTCCCTGGGAGC AGATCGAAGCGGATACGCGGATGAGCCTTCTACGGGATGCCGTCTGCGACTGA
Upstream 100 bases:
>100_bases GGGAATGAATAAGGGGGTGGCTTGACAACGCAAAGCTTGCCTTTATCATTCTTCATGACGTTTGCTTCAGGTAAGTTCAG GGAAACGGAAGGGATTTTCA
Downstream 100 bases:
>100_bases GGTTTACGGTTGCTATTCCATGCTCGCGTCGTTTGAAGCGACGGATATGTGTGGGAGACAGGTTAGGTATTCAATTGCTG TTTCTATGACGTATTCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKRSWGIWALTAALTIMAPSAVPVSPAYAADDQWVLLDEDPSTSRYYYDTTSIVQDDEDSVTVRTKAVYTAEGKADALDT IGHPKGFEDLADTNFYYTINCSDDMSRLEKVVHRDSTGRTIKEYLLAGKTPWEQIEADTRMSLLRDAVCD
Sequences:
>Translated_150_residues MKRSWGIWALTAALTIMAPSAVPVSPAYAADDQWVLLDEDPSTSRYYYDTTSIVQDDEDSVTVRTKAVYTAEGKADALDT IGHPKGFEDLADTNFYYTINCSDDMSRLEKVVHRDSTGRTIKEYLLAGKTPWEQIEADTRMSLLRDAVCD >Mature_150_residues MKRSWGIWALTAALTIMAPSAVPVSPAYAADDQWVLLDEDPSTSRYYYDTTSIVQDDEDSVTVRTKAVYTAEGKADALDT IGHPKGFEDLADTNFYYTINCSDDMSRLEKVVHRDSTGRTIKEYLLAGKTPWEQIEADTRMSLLRDAVCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16797; Mature: 16797
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSWGIWALTAALTIMAPSAVPVSPAYAADDQWVLLDEDPSTSRYYYDTTSIVQDDEDS CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEECCCCC VTVRTKAVYTAEGKADALDTIGHPKGFEDLADTNFYYTINCSDDMSRLEKVVHRDSTGRT EEEEEEEEEEECCCCCHHHHCCCCCCCCHHHCCCEEEEEECCHHHHHHHHHHHCCCCCHH IKEYLLAGKTPWEQIEADTRMSLLRDAVCD HHHHHHCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRSWGIWALTAALTIMAPSAVPVSPAYAADDQWVLLDEDPSTSRYYYDTTSIVQDDEDS CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEECCCCC VTVRTKAVYTAEGKADALDTIGHPKGFEDLADTNFYYTINCSDDMSRLEKVVHRDSTGRT EEEEEEEEEEECCCCCHHHHCCCCCCCCHHHCCCEEEEEECCHHHHHHHHHHHCCCCCHH IKEYLLAGKTPWEQIEADTRMSLLRDAVCD HHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA