Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78222128

Identifier: 78222128

GI number: 78222128

Start: 1000738

End: 1001955

Strand: Direct

Name: 78222128

Synonym: Gmet_0908

Alternate gene names: NA

Gene position: 1000738-1001955 (Clockwise)

Preceding gene: 78222127

Following gene: 78222129

Centisome position: 25.03

GC content: 59.36

Gene sequence:

>1218_bases
ATGGGAATCAAATGGTTTACCCACATTCTCCTGCTTGCGGGTGTCGTCAGTGCTTCAACCGGTTTTGCGGCCCAGATCAA
CGGCAGGAGCTCAACGCAACTGATCTGGTTCAATGATTACTACTCCGGGCGCCAGGTGGAGCTGGTGGAGTATCTGCGGC
TTTCCGTGACGAAGATCGACGAGGCCGGCAAGTTCTCCCTCTACGGTTACGGCCGCGGTTCGCAGGATCTGAACAACGGC
GACGGACTGAACGGCAGACTCTACTATCTCTATGCCGACTACCGGGGGCTGTTCGACAAGGTCGACTTCAGGCTCGGCCG
GCAGTTTGTGAACAATTCCGCCGGGACCGCCCTTGTCGACGGCGGTCAGATCGACCTGAGAAACATCGGCCCCATCGGGT
TCAACGTCTTCGGCGGCCGCGACGTCGTTTTCGGGATCAACGGCGAGGCGGGGCACAGCGGAAACTACGCCATGGGGCTG
TCGGCGTACCTTTCCGGATTCAGGAATACCGACCTGGACGTGAGCTGGTTCCGCAAGTGGGATGACGGTGACGTCTCCCG
CGATATCCTCGGCGCCTCGTTCAAGCAATACCTTTTCAACCGCCTGAAGCTCTATGGCAACGCCCGGTACGACGTGACGG
CAGAGGTCTTCAACGAAGTGCTGGGAGGGGTCAAGTATTTCCCGATGGCCAACCTCATCTTTACCGGCGAGTGGTATCAG
AGCTACCCCACCTTCGACACCACCTCGATTTACTCGGTCTTCGCCGTTAACCGCTACCAGGAGGGGGTCTTCCGGGTCGA
CTACACGATCAACGACATGATCGCCGTCAACGCCGGGTACAGCCGTCAGGACTATGGCGATGACGGCATTGCCAACGTGT
ACGAACTGGGGTGCAGGCTCCATCCGATCAGCTCCGTGGAGATCGGGCTCGCCTACGATAAGCGCAATGGCTACGGCGGC
AAGCTCGATGGCGGCCAGCTCGATGTGGCCTGGGACGTCACGAAGGGGCTCCAGCTCAGCGGCGGACTCACCTACGACGT
CTACCAACGCGACTTCTATCTTGACGGGAGCAGTCGCGAAACGGCCCAGAAATACTGGCTGGGGGGCAAGTACAAGCTTG
CCAGGAATCTGCAGGCGTCTCTGCGTGTGGAAGACGCCATCACCGCGCGGGACGAAAGCGATATCAACGGCCGCTTCGTT
CTGGACTACGATTTCTAG

Upstream 100 bases:

>100_bases
ACAATCGGAGAGCGGACCCCGGAACAGAGGAGGTGAGAGAGATGACCCGGGGGGCGCACAAGGTGATGTTGCTGATTTTG
TGAGAAAGGAGGTCCACTGA

Downstream 100 bases:

>100_bases
AAAGGGGGGATACCTGTGAGAAAATGGCTGATGTTCACTATGCTGCTGGCCATGGCGGCACTTTACTCACGGCAGGCGAC
AGCCGAACGCAAGGAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MGIKWFTHILLLAGVVSASTGFAAQINGRSSTQLIWFNDYYSGRQVELVEYLRLSVTKIDEAGKFSLYGYGRGSQDLNNG
DGLNGRLYYLYADYRGLFDKVDFRLGRQFVNNSAGTALVDGGQIDLRNIGPIGFNVFGGRDVVFGINGEAGHSGNYAMGL
SAYLSGFRNTDLDVSWFRKWDDGDVSRDILGASFKQYLFNRLKLYGNARYDVTAEVFNEVLGGVKYFPMANLIFTGEWYQ
SYPTFDTTSIYSVFAVNRYQEGVFRVDYTINDMIAVNAGYSRQDYGDDGIANVYELGCRLHPISSVEIGLAYDKRNGYGG
KLDGGQLDVAWDVTKGLQLSGGLTYDVYQRDFYLDGSSRETAQKYWLGGKYKLARNLQASLRVEDAITARDESDINGRFV
LDYDF

Sequences:

>Translated_405_residues
MGIKWFTHILLLAGVVSASTGFAAQINGRSSTQLIWFNDYYSGRQVELVEYLRLSVTKIDEAGKFSLYGYGRGSQDLNNG
DGLNGRLYYLYADYRGLFDKVDFRLGRQFVNNSAGTALVDGGQIDLRNIGPIGFNVFGGRDVVFGINGEAGHSGNYAMGL
SAYLSGFRNTDLDVSWFRKWDDGDVSRDILGASFKQYLFNRLKLYGNARYDVTAEVFNEVLGGVKYFPMANLIFTGEWYQ
SYPTFDTTSIYSVFAVNRYQEGVFRVDYTINDMIAVNAGYSRQDYGDDGIANVYELGCRLHPISSVEIGLAYDKRNGYGG
KLDGGQLDVAWDVTKGLQLSGGLTYDVYQRDFYLDGSSRETAQKYWLGGKYKLARNLQASLRVEDAITARDESDINGRFV
LDYDF
>Mature_404_residues
GIKWFTHILLLAGVVSASTGFAAQINGRSSTQLIWFNDYYSGRQVELVEYLRLSVTKIDEAGKFSLYGYGRGSQDLNNGD
GLNGRLYYLYADYRGLFDKVDFRLGRQFVNNSAGTALVDGGQIDLRNIGPIGFNVFGGRDVVFGINGEAGHSGNYAMGLS
AYLSGFRNTDLDVSWFRKWDDGDVSRDILGASFKQYLFNRLKLYGNARYDVTAEVFNEVLGGVKYFPMANLIFTGEWYQS
YPTFDTTSIYSVFAVNRYQEGVFRVDYTINDMIAVNAGYSRQDYGDDGIANVYELGCRLHPISSVEIGLAYDKRNGYGGK
LDGGQLDVAWDVTKGLQLSGGLTYDVYQRDFYLDGSSRETAQKYWLGGKYKLARNLQASLRVEDAITARDESDINGRFVL
DYDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45379; Mature: 45248

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKWFTHILLLAGVVSASTGFAAQINGRSSTQLIWFNDYYSGRQVELVEYLRLSVTKID
CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCEEHHHHHHHHHHEEEC
EAGKFSLYGYGRGSQDLNNGDGLNGRLYYLYADYRGLFDKVDFRLGRQFVNNSAGTALVD
CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEE
GGQIDLRNIGPIGFNVFGGRDVVFGINGEAGHSGNYAMGLSAYLSGFRNTDLDVSWFRKW
CCEEEEEECCCCCEEEECCCEEEEEECCCCCCCCCEEEEHHHHHCCCCCCCCCHHHEEEC
DDGDVSRDILGASFKQYLFNRLKLYGNARYDVTAEVFNEVLGGVKYFPMANLIFTGEWYQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCEEECCCEEEEEECCHHH
SYPTFDTTSIYSVFAVNRYQEGVFRVDYTINDMIAVNAGYSRQDYGDDGIANVYELGCRL
CCCCCCCCHHEEEEEEHHHCCCEEEEEEEECCEEEEECCCCCCCCCCCCHHHHHHCCCEE
HPISSVEIGLAYDKRNGYGGKLDGGQLDVAWDVTKGLQLSGGLTYDVYQRDFYLDGSSRE
CCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEEEEEEEECCCCCH
TAQKYWLGGKYKLARNLQASLRVEDAITARDESDINGRFVLDYDF
HHHHHHCCCEEEEECCCHHEEEEEHHEECCCCCCCCCEEEEEECC
>Mature Secondary Structure 
GIKWFTHILLLAGVVSASTGFAAQINGRSSTQLIWFNDYYSGRQVELVEYLRLSVTKID
CHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCEEHHHHHHHHHHEEEC
EAGKFSLYGYGRGSQDLNNGDGLNGRLYYLYADYRGLFDKVDFRLGRQFVNNSAGTALVD
CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEE
GGQIDLRNIGPIGFNVFGGRDVVFGINGEAGHSGNYAMGLSAYLSGFRNTDLDVSWFRKW
CCEEEEEECCCCCEEEECCCEEEEEECCCCCCCCCEEEEHHHHHCCCCCCCCCHHHEEEC
DDGDVSRDILGASFKQYLFNRLKLYGNARYDVTAEVFNEVLGGVKYFPMANLIFTGEWYQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCEEECCCEEEEEECCHHH
SYPTFDTTSIYSVFAVNRYQEGVFRVDYTINDMIAVNAGYSRQDYGDDGIANVYELGCRL
CCCCCCCCHHEEEEEEHHHCCCEEEEEEEECCEEEEECCCCCCCCCCCCHHHHHHCCCEE
HPISSVEIGLAYDKRNGYGGKLDGGQLDVAWDVTKGLQLSGGLTYDVYQRDFYLDGSSRE
CCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEEEEEEEECCCCCH
TAQKYWLGGKYKLARNLQASLRVEDAITARDESDINGRFVLDYDF
HHHHHHCCCEEEEECCCHHEEEEEHHEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA