| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222054
Identifier: 78222054
GI number: 78222054
Start: 920404
End: 920871
Strand: Direct
Name: 78222054
Synonym: Gmet_0834
Alternate gene names: NA
Gene position: 920404-920871 (Clockwise)
Preceding gene: 78222053
Following gene: 78222055
Centisome position: 23.02
GC content: 54.91
Gene sequence:
>468_bases ATGGCCCATACTTTGCTGTGTGAACCAAGTTCTACATTTCAATTCAGGGAGAGCTGCATGTGGACCGATGATCTGGCAGT GGGGATCGATGAAATTGACAGCCAGCACAAGGCGCTGTTCGAGCAACTGGATAAGCTTCTGGACGCATGCGTGGCCGGGG GGGAGCGGGAAGAGGTGGTGACCATGCTCTGCTTCCTCGATCAGTACGTGGTGGCCCATTTTTCCGCCGAGGAGAAGCTG CAGCAAGAGTACGGCTATCCCGGCTACGAGAAACACCGGGCCGAGCACGAAGAATTCATGCGGCGAATCAACCGTTTTGT GGAAGAGGTGGCCGCCGCGGCCCCGACTCGGGACCTCGTTCTCAGGGTGAACCAGACGCTCATTGACTGGCTCAAGTTCC ATATTCTCGCCGTGGACAAGGAAATGAGCGAATTTCTTCTCAAGAAAATGCGTTGCAATCCGATATAG
Upstream 100 bases:
>100_bases GCCGTTCAGGCGATACAGGTGACGGTTCCCGCAGCCGGTTTCGTGATGCTTGAACAGCGATGACATCTGCTGATGTCGTG GCGGCGAAGGAGGTGTCGTC
Downstream 100 bases:
>100_bases TTAACCGGGGGAAGCATCAGCTTTCCAGTCAATCAACCGGAACGGTGGGGGAAGGTATGCCAGAATTTTCAGATGTACCG CGGGATATGGACGTGTTGGA
Product: hemerythrin-like, metal-binding protein
Products: NA
Alternate protein names: Hemerythrin; Methyl-Accepting Chemotaxis Sensory Transducer; Methyl-Accepting Chemotaxis Protein; Hemerythrin-Like Protein; Metal Dependent Phosphohydrolase; Adenylate/Guanylate Cyclase; Methyl-Accepting Chemotaxis Protein DcrH; Hemerythrin-Related Protein; Hemerythrin-Like Domain-Containing Protein DcrH
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MAHTLLCEPSSTFQFRESCMWTDDLAVGIDEIDSQHKALFEQLDKLLDACVAGGEREEVVTMLCFLDQYVVAHFSAEEKL QQEYGYPGYEKHRAEHEEFMRRINRFVEEVAAAAPTRDLVLRVNQTLIDWLKFHILAVDKEMSEFLLKKMRCNPI
Sequences:
>Translated_155_residues MAHTLLCEPSSTFQFRESCMWTDDLAVGIDEIDSQHKALFEQLDKLLDACVAGGEREEVVTMLCFLDQYVVAHFSAEEKL QQEYGYPGYEKHRAEHEEFMRRINRFVEEVAAAAPTRDLVLRVNQTLIDWLKFHILAVDKEMSEFLLKKMRCNPI >Mature_154_residues AHTLLCEPSSTFQFRESCMWTDDLAVGIDEIDSQHKALFEQLDKLLDACVAGGEREEVVTMLCFLDQYVVAHFSAEEKLQ QEYGYPGYEKHRAEHEEFMRRINRFVEEVAAAAPTRDLVLRVNQTLIDWLKFHILAVDKEMSEFLLKKMRCNPI
Specific function: Unknown
COG id: COG2703
COG function: function code P; Hemerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18059; Mature: 17928
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTLLCEPSSTFQFRESCMWTDDLAVGIDEIDSQHKALFEQLDKLLDACVAGGEREEVV CCCCEECCCCCHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHH TMLCFLDQYVVAHFSAEEKLQQEYGYPGYEKHRAEHEEFMRRINRFVEEVAAAAPTRDLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRVNQTLIDWLKFHILAVDKEMSEFLLKKMRCNPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AHTLLCEPSSTFQFRESCMWTDDLAVGIDEIDSQHKALFEQLDKLLDACVAGGEREEVV CCCEECCCCCHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHH TMLCFLDQYVVAHFSAEEKLQQEYGYPGYEKHRAEHEEFMRRINRFVEEVAAAAPTRDLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRVNQTLIDWLKFHILAVDKEMSEFLLKKMRCNPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA