| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222046
Identifier: 78222046
GI number: 78222046
Start: 911064
End: 912347
Strand: Direct
Name: 78222046
Synonym: Gmet_0826
Alternate gene names: NA
Gene position: 911064-912347 (Clockwise)
Preceding gene: 78222045
Following gene: 78222047
Centisome position: 22.79
GC content: 62.31
Gene sequence:
>1284_bases GTGAAGCTTCACCAAGGCTTTACCCTGGGGGTGACGATCCTGGCGGCGCTGCTTGCGGCGTCGGCGCCGGGTTCGGCCGC CGATCTCGGCATCACCTCCGACACCATCGTCCGCCTCTACGAACGGAACGAGAGCGGGGGGCGGCAACGGTCCCTCCTGC CGGTCTACGAGTTCCTCCGCTTCGACTATACCGTTCCCAAAACGCCGGGGCTCTCGCTCCACGCCTACGGGTGGGGGCGG GCGAACCTCCGGGACGACTTTGGCAATGCCGACGGCACTACCGACGGTGAACTCCTCTATGCCTATCTGGATTATCTGGA TCCGAAGAACCGTGATTACCAGGTTCGCCTCGGGCGCCAGTACATCTTCGAGGGGGTGATGAGGGAGAGCATCGACGGCG TCTACGTCAAGACCGACCTGGTGCCGACCGTGACCGCCTCGGCCTACGCCGGCTTCCCCGTAAATCTGCAGGATGTCAAG GGGATGGGGGGCGACTGGATCTACGGCGCCCGGGTCGCCCAGGGGATTCCCGGCCGCTACGACGTTGCCTTGGCCTACAA GCACACGGGAAATGACGGCTCTACCGATGAGCAACTCCTAGGGGCCGACGCCACCCTCCTCCTTCCCGCTAACATTACCC TGCTCGGCCATACCACCTGGAATCTCGTCACCGGCGGCCTGGGAGAGCAGTCCTACGAGCTGAGGCTTCCCTTCAAGGCC TTCGAGCTTCGCCCCTTCTACCAGCACTACCGGTACGAGGATTTCCTCAACAGGAAATCGGGTGGTGCCACTCCCTTCCT GTACACATCCCAGTTCGGGGAGCAGGTGGACATCGCGGGGACCGAGGCCTTCTGGTACCCGGCGGAAAATATCGAGTTCG GCGCCCGCTACAAGCATTACGAGTATGGCAAGCGTTATGGTTCCGCCGACATGTACACGGTTCTGGCCGCTGTCCGGCGC AAGATCTTTTCCGAGGCGGGGGTGGAATTCGGCCGGGTGGAGGGTGATATCGCCCAGAACCGGTACTATCTCGGGCGGGC CTATGTTTACTGGGATGTGGCGCCGGCCTTTGTCACGGCTGACGTGGTCTATGTGAACTACGACGACGGCAATGTCTGGA GCATGTACCGCAAGGACAGCGCCTTCTTCGCCTCGGTCGGCGGGGGAAGCAAGTTCCTCGGCAAGGCCCTTACCGTGAAG CTCTCCCTCGACTACAGTCAGGACCCCTACTTCGACAAGGATTACCGTGGCACGCTGGCCGCCTCCTATGCCTTTGGCAA GTGA
Upstream 100 bases:
>100_bases GCGCCAGCGCTGACAGCAGATGCCGAGATCTCCTCTCCCTTGGGGGAGGAGATCTCGAACGATTTGCCTTTAATGTCGTG ATCTTATTAAGGAGGGATGC
Downstream 100 bases:
>100_bases CGGCCATAGATGGAGCACCTACCCATGAAAAAAGGAATGATTCTAACCCTCTTGGCGACAGGGCTGATACTCGCGCTCCT GGCGGCGTGCGCCTCGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MKLHQGFTLGVTILAALLAASAPGSAADLGITSDTIVRLYERNESGGRQRSLLPVYEFLRFDYTVPKTPGLSLHAYGWGR ANLRDDFGNADGTTDGELLYAYLDYLDPKNRDYQVRLGRQYIFEGVMRESIDGVYVKTDLVPTVTASAYAGFPVNLQDVK GMGGDWIYGARVAQGIPGRYDVALAYKHTGNDGSTDEQLLGADATLLLPANITLLGHTTWNLVTGGLGEQSYELRLPFKA FELRPFYQHYRYEDFLNRKSGGATPFLYTSQFGEQVDIAGTEAFWYPAENIEFGARYKHYEYGKRYGSADMYTVLAAVRR KIFSEAGVEFGRVEGDIAQNRYYLGRAYVYWDVAPAFVTADVVYVNYDDGNVWSMYRKDSAFFASVGGGSKFLGKALTVK LSLDYSQDPYFDKDYRGTLAASYAFGK
Sequences:
>Translated_427_residues MKLHQGFTLGVTILAALLAASAPGSAADLGITSDTIVRLYERNESGGRQRSLLPVYEFLRFDYTVPKTPGLSLHAYGWGR ANLRDDFGNADGTTDGELLYAYLDYLDPKNRDYQVRLGRQYIFEGVMRESIDGVYVKTDLVPTVTASAYAGFPVNLQDVK GMGGDWIYGARVAQGIPGRYDVALAYKHTGNDGSTDEQLLGADATLLLPANITLLGHTTWNLVTGGLGEQSYELRLPFKA FELRPFYQHYRYEDFLNRKSGGATPFLYTSQFGEQVDIAGTEAFWYPAENIEFGARYKHYEYGKRYGSADMYTVLAAVRR KIFSEAGVEFGRVEGDIAQNRYYLGRAYVYWDVAPAFVTADVVYVNYDDGNVWSMYRKDSAFFASVGGGSKFLGKALTVK LSLDYSQDPYFDKDYRGTLAASYAFGK >Mature_427_residues MKLHQGFTLGVTILAALLAASAPGSAADLGITSDTIVRLYERNESGGRQRSLLPVYEFLRFDYTVPKTPGLSLHAYGWGR ANLRDDFGNADGTTDGELLYAYLDYLDPKNRDYQVRLGRQYIFEGVMRESIDGVYVKTDLVPTVTASAYAGFPVNLQDVK GMGGDWIYGARVAQGIPGRYDVALAYKHTGNDGSTDEQLLGADATLLLPANITLLGHTTWNLVTGGLGEQSYELRLPFKA FELRPFYQHYRYEDFLNRKSGGATPFLYTSQFGEQVDIAGTEAFWYPAENIEFGARYKHYEYGKRYGSADMYTVLAAVRR KIFSEAGVEFGRVEGDIAQNRYYLGRAYVYWDVAPAFVTADVVYVNYDDGNVWSMYRKDSAFFASVGGGSKFLGKALTVK LSLDYSQDPYFDKDYRGTLAASYAFGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47602; Mature: 47602
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHQGFTLGVTILAALLAASAPGSAADLGITSDTIVRLYERNESGGRQRSLLPVYEFLR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHH FDYTVPKTPGLSLHAYGWGRANLRDDFGNADGTTDGELLYAYLDYLDPKNRDYQVRLGRQ CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHEEEHHHCCCCCCCEEEEECHH YIFEGVMRESIDGVYVKTDLVPTVTASAYAGFPVNLQDVKGMGGDWIYGARVAQGIPGRY HHHHHHHHHCCCCEEEEECCCCEEEHHHCCCCCCCHHHHCCCCCCEEEHHHHHCCCCCCE DVALAYKHTGNDGSTDEQLLGADATLLLPANITLLGHTTWNLVTGGLGEQSYELRLPFKA EEEEEEEECCCCCCCCHHHHCCCEEEEEECEEEEEECCCEEEEECCCCCCCEEEECCHHH FELRPFYQHYRYEDFLNRKSGGATPFLYTSQFGEQVDIAGTEAFWYPAENIEFGARYKHY EECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCEEEEECCCCCCCCCCCCHH EYGKRYGSADMYTVLAAVRRKIFSEAGVEFGRVEGDIAQNRYYLGRAYVYWDVAPAFVTA HHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHCCEEEEEEEEEEEECCCCEEEE DVVYVNYDDGNVWSMYRKDSAFFASVGGGSKFLGKALTVKLSLDYSQDPYFDKDYRGTLA EEEEEECCCCCEEEEEECCCEEEEECCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCEE ASYAFGK EEECCCC >Mature Secondary Structure MKLHQGFTLGVTILAALLAASAPGSAADLGITSDTIVRLYERNESGGRQRSLLPVYEFLR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHH FDYTVPKTPGLSLHAYGWGRANLRDDFGNADGTTDGELLYAYLDYLDPKNRDYQVRLGRQ CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHEEEHHHCCCCCCCEEEEECHH YIFEGVMRESIDGVYVKTDLVPTVTASAYAGFPVNLQDVKGMGGDWIYGARVAQGIPGRY HHHHHHHHHCCCCEEEEECCCCEEEHHHCCCCCCCHHHHCCCCCCEEEHHHHHCCCCCCE DVALAYKHTGNDGSTDEQLLGADATLLLPANITLLGHTTWNLVTGGLGEQSYELRLPFKA EEEEEEEECCCCCCCCHHHHCCCEEEEEECEEEEEECCCEEEEECCCCCCCEEEECCHHH FELRPFYQHYRYEDFLNRKSGGATPFLYTSQFGEQVDIAGTEAFWYPAENIEFGARYKHY EECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCEEEEECCCCCCCCCCCCHH EYGKRYGSADMYTVLAAVRRKIFSEAGVEFGRVEGDIAQNRYYLGRAYVYWDVAPAFVTA HHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHCCEEEEEEEEEEEECCCCEEEE DVVYVNYDDGNVWSMYRKDSAFFASVGGGSKFLGKALTVKLSLDYSQDPYFDKDYRGTLA EEEEEECCCCCEEEEEECCCEEEEECCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCEE ASYAFGK EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA