Click here to switch to the map view.

The map label for this gene is 78222047

Identifier: 78222047

GI number: 78222047

Start: 912372

End: 912842

Strand: Direct

Name: 78222047

Synonym: Gmet_0827

Alternate gene names: NA

Gene position: 912372-912842 (Clockwise)

Preceding gene: 78222046

Following gene: 78222048

Centisome position: 22.82

GC content: 61.78

Gene sequence:

>471_bases
ATGAAAAAAGGAATGATTCTAACCCTCTTGGCGACAGGGCTGATACTCGCGCTCCTGGCGGCGTGCGCCTCGACCCCGGC
CTATCGGCTGCCGGCCAAACACCCCAACATCTATGAGCTGGGCGACCGCCGCGAGTTCTGCACCAAGTGCCACGGCTACA
AGAAGACCCCGGTGGATTTCGAACGGTACAACCATACCCCGCTTTTCACCGAGTCCCATCGCCTTGTGGCCTACCAGGAC
CAGCGAATCTGCGCCCTCTGCCACGAGCAGAGCTTCTGCAACGACTGTCACGTGACCCACACGGAACTGAAACCGTCGGT
CAAGAACCAGACGGAGAACTACCGGCGGATGCAGCACCGGGGCGAGTACCTCTCCCGCCACCGGATCGACGGTCGTCTCG
ACCCCACCTCGTGCTACCGTTGCCACGGCAATCCCCAGTCGTCCCAGACGTGTCGGCCATGCCACGGTTAG

Upstream 100 bases:

>100_bases
CGACTACAGTCAGGACCCCTACTTCGACAAGGATTACCGTGGCACGCTGGCCGCCTCCTATGCCTTTGGCAAGTGACGGC
CATAGATGGAGCACCTACCC

Downstream 100 bases:

>100_bases
AGGGTATGAGTATGCAAGCCAAGCTGAAGCTAACGGCCGGGATTTTCCTCTGTGCCATGGTACTGGCGGGATGTGGCGGC
GGGCTCAATGCGTCGAACCC

Product: cytochrome c family protein

Products: NA

Alternate protein names: Lipoprotein Cytochrome C

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKKGMILTLLATGLILALLAACASTPAYRLPAKHPNIYELGDRREFCTKCHGYKKTPVDFERYNHTPLFTESHRLVAYQD
QRICALCHEQSFCNDCHVTHTELKPSVKNQTENYRRMQHRGEYLSRHRIDGRLDPTSCYRCHGNPQSSQTCRPCHG

Sequences:

>Translated_156_residues
MKKGMILTLLATGLILALLAACASTPAYRLPAKHPNIYELGDRREFCTKCHGYKKTPVDFERYNHTPLFTESHRLVAYQD
QRICALCHEQSFCNDCHVTHTELKPSVKNQTENYRRMQHRGEYLSRHRIDGRLDPTSCYRCHGNPQSSQTCRPCHG
>Mature_156_residues
MKKGMILTLLATGLILALLAACASTPAYRLPAKHPNIYELGDRREFCTKCHGYKKTPVDFERYNHTPLFTESHRLVAYQD
QRICALCHEQSFCNDCHVTHTELKPSVKNQTENYRRMQHRGEYLSRHRIDGRLDPTSCYRCHGNPQSSQTCRPCHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18006; Mature: 18006

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGMILTLLATGLILALLAACASTPAYRLPAKHPNIYELGDRREFCTKCHGYKKTPVDF
CCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEECCCHHHHHHHHCCCCCCCCCH
ERYNHTPLFTESHRLVAYQDQRICALCHEQSFCNDCHVTHTELKPSVKNQTENYRRMQHR
HHCCCCCCEECCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHH
GEYLSRHRIDGRLDPTSCYRCHGNPQSSQTCRPCHG
HHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKGMILTLLATGLILALLAACASTPAYRLPAKHPNIYELGDRREFCTKCHGYKKTPVDF
CCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEECCCHHHHHHHHCCCCCCCCCH
ERYNHTPLFTESHRLVAYQDQRICALCHEQSFCNDCHVTHTELKPSVKNQTENYRRMQHR
HHCCCCCCEECCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHH
GEYLSRHRIDGRLDPTSCYRCHGNPQSSQTCRPCHG
HHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA