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The map label for this gene is 78222022

Identifier: 78222022

GI number: 78222022

Start: 882241

End: 882900

Strand: Direct

Name: 78222022

Synonym: Gmet_0802

Alternate gene names: NA

Gene position: 882241-882900 (Clockwise)

Preceding gene: 78222021

Following gene: 78222023

Centisome position: 22.07

GC content: 60.0

Gene sequence:

>660_bases
ATGAAAAGAATTCTCATTGCCGCTGCAGCCATCGCCATCTGGGGGATGCCCGCCATGAGCCAGGCAACGCCTGCCCGGCC
CGGGGGGTATTTTTCCGGTTTCCTCGGGGTGAGCATCCCCCGGGACGCCGACGTTGCCGGCACCGATTCCGGTACATCCT
TCAACGACCGGGTGGAGTTCGATCCCGGTATTGTCGTGGGTGGCACCGCTGGGTATGATTACGGCTTTCTCCGCCTGGAG
GGGGAGCTTTCCTACCGGCATTCTGAGATCAAGTCCGTCACTGCTTCGGACGGGTACCGCTTCCACGGCGTGGATGGTGA
TCTCGGTGCCCTGGCGGTCATGGCCAACGCCTTTGTCGATATGCACAACCAGAGCCCCATTACCCCCTACGTGGGAGGAG
GCGTCGGCTTCGCCGTGCTCAATCTGGGTAATACCACCAGTACTGAATTGGACCCCCTCTATGAGAAGGGGGATGACACC
GTTTTCGCCTACCAGGCGGGAGCCGGGGTGGAGATAGCCCTCAACCCGATCATGTCCCTTGACCTGGGATATCGCTATTT
CGGCACTTCAAAGGCCACCTTCGACGAAGGTGTGGTGACGGCGACCAAGTTCAGGTTCGAGAGCCACAATGCGCTGATGG
GGCTCAGGGTCAAGTTCTAG

Upstream 100 bases:

>100_bases
AAATGACTGGTTCGCCTCCATTCAGGCCCGGGATGTAAACTGCACCCCTCCTTTTGCGTTATACTGATTACATTTGGCAT
ACCATTCAAGGAGGATAACC

Downstream 100 bases:

>100_bases
ATTTATTCGGTAGCGCCCGGAAAAGCCCGCCATGTGCGGGCTTTTCCGTTTGTGATAGGAACAACCATTCACTCTAAATT
CCCTCCTTGACTTTGTAGAC

Product: tia invasion determinant-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKRILIAAAAIAIWGMPAMSQATPARPGGYFSGFLGVSIPRDADVAGTDSGTSFNDRVEFDPGIVVGGTAGYDYGFLRLE
GELSYRHSEIKSVTASDGYRFHGVDGDLGALAVMANAFVDMHNQSPITPYVGGGVGFAVLNLGNTTSTELDPLYEKGDDT
VFAYQAGAGVEIALNPIMSLDLGYRYFGTSKATFDEGVVTATKFRFESHNALMGLRVKF

Sequences:

>Translated_219_residues
MKRILIAAAAIAIWGMPAMSQATPARPGGYFSGFLGVSIPRDADVAGTDSGTSFNDRVEFDPGIVVGGTAGYDYGFLRLE
GELSYRHSEIKSVTASDGYRFHGVDGDLGALAVMANAFVDMHNQSPITPYVGGGVGFAVLNLGNTTSTELDPLYEKGDDT
VFAYQAGAGVEIALNPIMSLDLGYRYFGTSKATFDEGVVTATKFRFESHNALMGLRVKF
>Mature_219_residues
MKRILIAAAAIAIWGMPAMSQATPARPGGYFSGFLGVSIPRDADVAGTDSGTSFNDRVEFDPGIVVGGTAGYDYGFLRLE
GELSYRHSEIKSVTASDGYRFHGVDGDLGALAVMANAFVDMHNQSPITPYVGGGVGFAVLNLGNTTSTELDPLYEKGDDT
VFAYQAGAGVEIALNPIMSLDLGYRYFGTSKATFDEGVVTATKFRFESHNALMGLRVKF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opacity porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR003394 [H]

Pfam domain/function: PF02462 Opacity [H]

EC number: NA

Molecular weight: Translated: 23262; Mature: 23262

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILIAAAAIAIWGMPAMSQATPARPGGYFSGFLGVSIPRDADVAGTDSGTSFNDRVEF
CCEEEEEHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEE
DPGIVVGGTAGYDYGFLRLEGELSYRHSEIKSVTASDGYRFHGVDGDLGALAVMANAFVD
CCCEEEECCCCCCEEEEEEECCCCCCHHHHHEEECCCCEEEECCCCCHHHHHHHHHHHHC
MHNQSPITPYVGGGVGFAVLNLGNTTSTELDPLYEKGDDTVFAYQAGAGVEIALNPIMSL
CCCCCCCCCEECCCEEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEEEECCEEEE
DLGYRYFGTSKATFDEGVVTATKFRFESHNALMGLRVKF
CCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MKRILIAAAAIAIWGMPAMSQATPARPGGYFSGFLGVSIPRDADVAGTDSGTSFNDRVEF
CCEEEEEHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEE
DPGIVVGGTAGYDYGFLRLEGELSYRHSEIKSVTASDGYRFHGVDGDLGALAVMANAFVD
CCCEEEECCCCCCEEEEEEECCCCCCHHHHHEEECCCCEEEECCCCCHHHHHHHHHHHHC
MHNQSPITPYVGGGVGFAVLNLGNTTSTELDPLYEKGDDTVFAYQAGAGVEIALNPIMSL
CCCCCCCCCEECCCEEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEEEECCEEEE
DLGYRYFGTSKATFDEGVVTATKFRFESHNALMGLRVKF
CCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]