| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222017
Identifier: 78222017
GI number: 78222017
Start: 877148
End: 878092
Strand: Reverse
Name: 78222017
Synonym: Gmet_0797
Alternate gene names: NA
Gene position: 878092-877148 (Counterclockwise)
Preceding gene: 78222018
Following gene: 78222016
Centisome position: 21.97
GC content: 58.2
Gene sequence:
>945_bases TTGAAAAAAGGGATTTTTTCATTTTTGGTCACGACTTGGCTGTTGACCGGCACGACCGTGCCGGCATCGGCGACAACCTT CCAGTCCCATACGCTGAACACGCTCAGCTTCAGTTATGTGGAGAACCTTTTCGATTCGAACGGAACCATGAAGAATGGAC TGGAACTGGCGCCGGGAGATCACTTGGTGGGAATCATATCCGTCAACCGGATCGTAGCGGGAGGGGAAACGATTTTCACG GCAGGCCCAACGTCGCAACTGACCGGGATTTACGCCCATAAGGTGCTGAGCATCCCACCGTATCTGGTGAACGGGCAGTA TGCATACGATCCCCTCAACCCTTCGTCATTCCAAGTGCACACGGAATACGGCAACCCTGACCTGGGGGCATTTACTGTCG GTTCAAGCACTGTCAACCTTGCCAGCATCCTGGACCCGGGTGCGGTTCTGGCCCTCTGGCTCGACCAGGGGAACAGCGCC ACCAGCTTCACGACGGAGGGAACCCTTGCCGACAGCGTGGCCCGGGCAACCGACGGACTCCCCTTTCTCTCCGCGGGGAT TGGGAATTCGGGATATTTTTACAGTCATACCAACCAGTCCGTCACCATGGCCGAGTTGCTGAACGGAGCCTTCATAGGCC AGGCCTTCGCCGGCCTGGAAGTATTGACCAATGCCACGGGGCACGGACTCTCCCCCATCTTCAACCCCGGCGACCTGGAA AAAGGTACTGCAACGCCGTTGGTCCTTTCCTGCGACCTCGGGATCAATCCGGCCTTTTTTTCACCGGAGCCGGCCTCGCC CTGGGTTCTCGCCGGCACAGGCTCGGTGCAAGTCTATCCGGCTCCAGAGCCATCCACCCTGGCCCTCTTTGGCGTTGCCG GGAGCGTAATGGCCCTGTGCAGACTGAGGAAACGCACCCTCAATGACCGGGAAGATACTCCATGA
Upstream 100 bases:
>100_bases AATATTTTCATAAAAAATGGTTTCATGATACAGAAAGACGCCTTGCGATTTACCATCAAGGACACATAACGTGGCATACC ATGCAGAGGAGGGCATACTG
Downstream 100 bases:
>100_bases TTTTCACCACACTGCGCGCAACCCTGGCAATGCTCGCCGCCATGGCCATCGCCTGCGCCCTGCCGGTGCGGGCCTCGGCC GGGGACAATCTGGCGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKKGIFSFLVTTWLLTGTTVPASATTFQSHTLNTLSFSYVENLFDSNGTMKNGLELAPGDHLVGIISVNRIVAGGETIFT AGPTSQLTGIYAHKVLSIPPYLVNGQYAYDPLNPSSFQVHTEYGNPDLGAFTVGSSTVNLASILDPGAVLALWLDQGNSA TSFTTEGTLADSVARATDGLPFLSAGIGNSGYFYSHTNQSVTMAELLNGAFIGQAFAGLEVLTNATGHGLSPIFNPGDLE KGTATPLVLSCDLGINPAFFSPEPASPWVLAGTGSVQVYPAPEPSTLALFGVAGSVMALCRLRKRTLNDREDTP
Sequences:
>Translated_314_residues MKKGIFSFLVTTWLLTGTTVPASATTFQSHTLNTLSFSYVENLFDSNGTMKNGLELAPGDHLVGIISVNRIVAGGETIFT AGPTSQLTGIYAHKVLSIPPYLVNGQYAYDPLNPSSFQVHTEYGNPDLGAFTVGSSTVNLASILDPGAVLALWLDQGNSA TSFTTEGTLADSVARATDGLPFLSAGIGNSGYFYSHTNQSVTMAELLNGAFIGQAFAGLEVLTNATGHGLSPIFNPGDLE KGTATPLVLSCDLGINPAFFSPEPASPWVLAGTGSVQVYPAPEPSTLALFGVAGSVMALCRLRKRTLNDREDTP >Mature_314_residues MKKGIFSFLVTTWLLTGTTVPASATTFQSHTLNTLSFSYVENLFDSNGTMKNGLELAPGDHLVGIISVNRIVAGGETIFT AGPTSQLTGIYAHKVLSIPPYLVNGQYAYDPLNPSSFQVHTEYGNPDLGAFTVGSSTVNLASILDPGAVLALWLDQGNSA TSFTTEGTLADSVARATDGLPFLSAGIGNSGYFYSHTNQSVTMAELLNGAFIGQAFAGLEVLTNATGHGLSPIFNPGDLE KGTATPLVLSCDLGINPAFFSPEPASPWVLAGTGSVQVYPAPEPSTLALFGVAGSVMALCRLRKRTLNDREDTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32857; Mature: 32857
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGIFSFLVTTWLLTGTTVPASATTFQSHTLNTLSFSYVENLFDSNGTMKNGLELAPGD CCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCC HLVGIISVNRIVAGGETIFTAGPTSQLTGIYAHKVLSIPPYLVNGQYAYDPLNPSSFQVH CEEEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCEEEE TEYGNPDLGAFTVGSSTVNLASILDPGAVLALWLDQGNSATSFTTEGTLADSVARATDGL EECCCCCCCEEEECCCCEEHHHHCCCCEEEEEEEECCCCCCEEEECCCHHHHHHHHHCCC PFLSAGIGNSGYFYSHTNQSVTMAELLNGAFIGQAFAGLEVLTNATGHGLSPIFNPGDLE CEEECCCCCCCEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KGTATPLVLSCDLGINPAFFSPEPASPWVLAGTGSVQVYPAPEPSTLALFGVAGSVMALC CCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEHHHHHHHHHH RLRKRTLNDREDTP HHHHHHCCCCCCCC >Mature Secondary Structure MKKGIFSFLVTTWLLTGTTVPASATTFQSHTLNTLSFSYVENLFDSNGTMKNGLELAPGD CCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCC HLVGIISVNRIVAGGETIFTAGPTSQLTGIYAHKVLSIPPYLVNGQYAYDPLNPSSFQVH CEEEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCEEEE TEYGNPDLGAFTVGSSTVNLASILDPGAVLALWLDQGNSATSFTTEGTLADSVARATDGL EECCCCCCCEEEECCCCEEHHHHCCCCEEEEEEEECCCCCCEEEECCCHHHHHHHHHCCC PFLSAGIGNSGYFYSHTNQSVTMAELLNGAFIGQAFAGLEVLTNATGHGLSPIFNPGDLE CEEECCCCCCCEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KGTATPLVLSCDLGINPAFFSPEPASPWVLAGTGSVQVYPAPEPSTLALFGVAGSVMALC CCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEHHHHHHHHHH RLRKRTLNDREDTP HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA