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The map label for this gene is dctR [H]

Identifier: 78221998

GI number: 78221998

Start: 856284

End: 856712

Strand: Reverse

Name: dctR [H]

Synonym: Gmet_0778

Alternate gene names: 78221998

Gene position: 856712-856284 (Counterclockwise)

Preceding gene: 78221999

Following gene: 78221997

Centisome position: 21.43

GC content: 51.05

Gene sequence:

>429_bases
ATGGAACCAGCCCGCAATCCAGCCAAATCCATCAACATTCTCTTTGTGGAAGACGACCGGTATGCGAGAGAATTGATTCC
GCTCATGATCTCCAACAAATTCCCGGGGGTTGCCATCATCCTTGCCGATAATGGCGAATCAGGGTTGGAACTCTGCCGGG
CCAATGAATTCGACATCGTCATAACCGATATCAACATGCCCGACATGGACGGCATCCGGATGGCCGGGGAGATCAGAGGC
CTGAAACCGGACGCCAAAATCATCGTCATGTCCGGTTATAGCGAAAAGTGCTACTTCGACCAGTTGCAGGATATCGGCAT
CACGGACTATATCCTGAAACCGGTAGACACCAAGCTTTTGTTCCTGGCTATCGGCAAATTCATTGACCAGGTCATGCTGA
AACGTCACAGGCCTGCGGTGATCAACTAA

Upstream 100 bases:

>100_bases
GGACTTTTCATGTCAAAAAACATCATTGAACGAAACATGGGAGGCCACTTGACCGTTCGCAACATCAAAGAATGCGCCGA
ATTCAGGATCGAGGTCTGAC

Downstream 100 bases:

>100_bases
CCGGCACCATGCAGAAACCGGAGTTACCAAGCCCCCCTAGAGAAAAGAGGCACCGCAGATAACCACCGGTGCCTCTTTTC
TCATTTTCGAGACCGCCCTT

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MEPARNPAKSINILFVEDDRYARELIPLMISNKFPGVAIILADNGESGLELCRANEFDIVITDINMPDMDGIRMAGEIRG
LKPDAKIIVMSGYSEKCYFDQLQDIGITDYILKPVDTKLLFLAIGKFIDQVMLKRHRPAVIN

Sequences:

>Translated_142_residues
MEPARNPAKSINILFVEDDRYARELIPLMISNKFPGVAIILADNGESGLELCRANEFDIVITDINMPDMDGIRMAGEIRG
LKPDAKIIVMSGYSEKCYFDQLQDIGITDYILKPVDTKLLFLAIGKFIDQVMLKRHRPAVIN
>Mature_142_residues
MEPARNPAKSINILFVEDDRYARELIPLMISNKFPGVAIILADNGESGLELCRANEFDIVITDINMPDMDGIRMAGEIRG
LKPDAKIIVMSGYSEKCYFDQLQDIGITDYILKPVDTKLLFLAIGKFIDQVMLKRHRPAVIN

Specific function: Member of the two-component regulatory system dctS/dctR. Essential for expression of dctP [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790437, Length=107, Percent_Identity=32.7102803738318, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001034
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08220 HTH_DeoR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 15986; Mature: 15986

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPARNPAKSINILFVEDDRYARELIPLMISNKFPGVAIILADNGESGLELCRANEFDIV
CCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCEEE
ITDINMPDMDGIRMAGEIRGLKPDAKIIVMSGYSEKCYFDQLQDIGITDYILKPVDTKLL
EEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHCCCCCHHHH
FLAIGKFIDQVMLKRHRPAVIN
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEPARNPAKSINILFVEDDRYARELIPLMISNKFPGVAIILADNGESGLELCRANEFDIV
CCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCEEE
ITDINMPDMDGIRMAGEIRGLKPDAKIIVMSGYSEKCYFDQLQDIGITDYILKPVDTKLL
EEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHCCCCCHHHH
FLAIGKFIDQVMLKRHRPAVIN
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9168601; 10708364 [H]