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The map label for this gene is atoS [C]

Identifier: 78221999

GI number: 78221999

Start: 856714

End: 858018

Strand: Reverse

Name: atoS [C]

Synonym: Gmet_0779

Alternate gene names: 78221999

Gene position: 858018-856714 (Counterclockwise)

Preceding gene: 78222000

Following gene: 78221998

Centisome position: 21.46

GC content: 54.87

Gene sequence:

>1305_bases
ATGGAGCTTCCCCTTCAAAGCGTTGTCCCCAGGACGGAGGGGGACGCTTTAACACTCCTCCATGAGTTGCAGGTCCACCA
GATCGAACTGGAAATGCAGAATGAGGAGCTGCACCGGTCACAGGATGAGTTGCGAAGTTCCCGGGACCGTTATTCGCTCC
TCTATGATTTTGCCCCGGTGGGCTATTTCACCCTCTCCCGCAACGGAACGATCCTCTCCGCCAACCTGGCCGGGGCGACC
CTGCTGAATACGGAACGCTCCCGGCTTATCAGGCAGAATTTTGGCCGTTTTCTCGACAAAATCAATTCCGCGCGCTTCAA
GGAATTGCTGGACAAGGTGTTTTCCGGCAATAACACGCACACGTTCGAGCTGCTCATGTCGAAGGGGCTGCAACAGCCGC
TCTTCGTGCAGATAGAGGGGACCACTGTCGTCCCTGGTGACGAGTGCCTTATGGCGGTGATCGATATCACCCCCAGGAAA
CAGGCGGAGGATAACCTCCTCCGGGCCAGGGAGGAGTTGGAGCAGCGCGTTTTGGAACGGACCGTGGAACTGGCCCGATC
CATTGACCGGGAAAAGGAGGAAATGACCGGGCGGCTGCAGGCGGTGGAAGAGCTCCGGAACAAGGAACTGCTGCTGGTTC
ACCAGGGGAGGATGGCCGCCATGGGGGAGATGCTCGCCAATATCGCCCACCAATGGCGGCAATCGTTGAATGTCATGGGG
CTATTGATTCAGCAACTAGGGTTGTTCAGCGAATCCGACTGCCTTGACAAGCAGTTGGTCAGCGTTAACGTTGCGAAGGC
GATGGAAATCCTCAAACACCTGTCCCAAACCATCGATGATTTCCGGGCCTTTTCCGAACCGGACCGGGAAAAGATCCCGT
TCAGGATAAACCAGGTCATCAAAAAAACACTGGAACTCGTTGGCGAACTCTTCACGCAGCAAGGCATTTCAATCCAGTCC
GATTTTGTCCAGGATTCGCAGGTGGCGGGATTCCCCAATGAATTCAGCCAGGCGCTGCTCAATCTCCTGTTAAACGCACG
GGATGCGCTCGTTGCCGATAAATGGATAAAAGTGAGTTCCCGGCCGGAGAACGGCAGGGCTGTTGTCACGATCACCGACA
ACGGCGGCGGGATCGATGAGAACATTATCGACAAGGTTTTCGATCCCTATTTCACCACCAAGAAACTCGGCAAGGGAAGC
GGCATCGGACTTTTCATGTCAAAAAACATCATTGAACGAAACATGGGAGGCCACTTGACCGTTCGCAACATCAAAGAATG
CGCCGAATTCAGGATCGAGGTCTGA

Upstream 100 bases:

>100_bases
GATGAGGTCAAAAAACTGCTGCAGGGGCGGAAAGAAGAATGATGCCCCACCTGGCGCGCCGCAGGACGTAACGCTCCGCC
GCGGCGCGGAGAGACGCCTC

Downstream 100 bases:

>100_bases
CATGGAACCAGCCCGCAATCCAGCCAAATCCATCAACATTCTCTTTGTGGAAGACGACCGGTATGCGAGAGAATTGATTC
CGCTCATGATCTCCAACAAA

Product: PAS/PAC sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MELPLQSVVPRTEGDALTLLHELQVHQIELEMQNEELHRSQDELRSSRDRYSLLYDFAPVGYFTLSRNGTILSANLAGAT
LLNTERSRLIRQNFGRFLDKINSARFKELLDKVFSGNNTHTFELLMSKGLQQPLFVQIEGTTVVPGDECLMAVIDITPRK
QAEDNLLRAREELEQRVLERTVELARSIDREKEEMTGRLQAVEELRNKELLLVHQGRMAAMGEMLANIAHQWRQSLNVMG
LLIQQLGLFSESDCLDKQLVSVNVAKAMEILKHLSQTIDDFRAFSEPDREKIPFRINQVIKKTLELVGELFTQQGISIQS
DFVQDSQVAGFPNEFSQALLNLLLNARDALVADKWIKVSSRPENGRAVVTITDNGGGIDENIIDKVFDPYFTTKKLGKGS
GIGLFMSKNIIERNMGGHLTVRNIKECAEFRIEV

Sequences:

>Translated_434_residues
MELPLQSVVPRTEGDALTLLHELQVHQIELEMQNEELHRSQDELRSSRDRYSLLYDFAPVGYFTLSRNGTILSANLAGAT
LLNTERSRLIRQNFGRFLDKINSARFKELLDKVFSGNNTHTFELLMSKGLQQPLFVQIEGTTVVPGDECLMAVIDITPRK
QAEDNLLRAREELEQRVLERTVELARSIDREKEEMTGRLQAVEELRNKELLLVHQGRMAAMGEMLANIAHQWRQSLNVMG
LLIQQLGLFSESDCLDKQLVSVNVAKAMEILKHLSQTIDDFRAFSEPDREKIPFRINQVIKKTLELVGELFTQQGISIQS
DFVQDSQVAGFPNEFSQALLNLLLNARDALVADKWIKVSSRPENGRAVVTITDNGGGIDENIIDKVFDPYFTTKKLGKGS
GIGLFMSKNIIERNMGGHLTVRNIKECAEFRIEV
>Mature_434_residues
MELPLQSVVPRTEGDALTLLHELQVHQIELEMQNEELHRSQDELRSSRDRYSLLYDFAPVGYFTLSRNGTILSANLAGAT
LLNTERSRLIRQNFGRFLDKINSARFKELLDKVFSGNNTHTFELLMSKGLQQPLFVQIEGTTVVPGDECLMAVIDITPRK
QAEDNLLRAREELEQRVLERTVELARSIDREKEEMTGRLQAVEELRNKELLLVHQGRMAAMGEMLANIAHQWRQSLNVMG
LLIQQLGLFSESDCLDKQLVSVNVAKAMEILKHLSQTIDDFRAFSEPDREKIPFRINQVIKKTLELVGELFTQQGISIQS
DFVQDSQVAGFPNEFSQALLNLLLNARDALVADKWIKVSSRPENGRAVVTITDNGGGIDENIIDKVFDPYFTTKKLGKGS
GIGLFMSKNIIERNMGGHLTVRNIKECAEFRIEV

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=383, Percent_Identity=24.0208877284595, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1790436, Length=219, Percent_Identity=26.9406392694064, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49194; Mature: 49194

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50109 HIS_KIN ; PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPLQSVVPRTEGDALTLLHELQVHQIELEMQNEELHRSQDELRSSRDRYSLLYDFAPV
CCCCHHHHCCCCCCCHHHHHHHHHHHHHEEEECHHHHHCCHHHHHHHHHHHHHHHHCCCC
GYFTLSRNGTILSANLAGATLLNTERSRLIRQNFGRFLDKINSARFKELLDKVFSGNNTH
CEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TFELLMSKGLQQPLFVQIEGTTVVPGDECLMAVIDITPRKQAEDNLLRAREELEQRVLER
HHHHHHHCCCCCCEEEEECCCEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TVELARSIDREKEEMTGRLQAVEELRNKELLLVHQGRMAAMGEMLANIAHQWRQSLNVMG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LLIQQLGLFSESDCLDKQLVSVNVAKAMEILKHLSQTIDDFRAFSEPDREKIPFRINQVI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
KKTLELVGELFTQQGISIQSDFVQDSQVAGFPNEFSQALLNLLLNARDALVADKWIKVSS
HHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC
RPENGRAVVTITDNGGGIDENIIDKVFDPYFTTKKLGKGSGIGLFMSKNIIERNMGGHLT
CCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHCCCCCCEEEEHHHHHHHHCCCCCEE
VRNIKECAEFRIEV
HHHHHHHHHHCCCC
>Mature Secondary Structure
MELPLQSVVPRTEGDALTLLHELQVHQIELEMQNEELHRSQDELRSSRDRYSLLYDFAPV
CCCCHHHHCCCCCCCHHHHHHHHHHHHHEEEECHHHHHCCHHHHHHHHHHHHHHHHCCCC
GYFTLSRNGTILSANLAGATLLNTERSRLIRQNFGRFLDKINSARFKELLDKVFSGNNTH
CEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TFELLMSKGLQQPLFVQIEGTTVVPGDECLMAVIDITPRKQAEDNLLRAREELEQRVLER
HHHHHHHCCCCCCEEEEECCCEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TVELARSIDREKEEMTGRLQAVEELRNKELLLVHQGRMAAMGEMLANIAHQWRQSLNVMG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LLIQQLGLFSESDCLDKQLVSVNVAKAMEILKHLSQTIDDFRAFSEPDREKIPFRINQVI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
KKTLELVGELFTQQGISIQSDFVQDSQVAGFPNEFSQALLNLLLNARDALVADKWIKVSS
HHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC
RPENGRAVVTITDNGGGIDENIIDKVFDPYFTTKKLGKGSGIGLFMSKNIIERNMGGHLT
CCCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHCCCCCCEEEEHHHHHHHHCCCCCEE
VRNIKECAEFRIEV
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA