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The map label for this gene is fadF [H]

Identifier: 78221905

GI number: 78221905

Start: 751933

End: 753912

Strand: Direct

Name: fadF [H]

Synonym: Gmet_0685

Alternate gene names: 78221905

Gene position: 751933-753912 (Clockwise)

Preceding gene: 78221904

Following gene: 78221906

Centisome position: 18.81

GC content: 62.78

Gene sequence:

>1980_bases
ATGACCATTTTCACTCCACTGTTCCTCATTGCCATCGGCGTCTTCATCTGGCAGTGCGGCAAGAAACTGAGCCTCATTCG
TCTCGGCCGGCCCGAGAACCGCTTTGACAATCCGTCGTTGCGGCTCTGGGACATGCTGCTCTACGCCTTCGGCCAGAAGC
GGGTGGTGGCCCGCCCCTTCGGGCTCAACCACTTCGTCATCTTCTGGGCTTTCGTCGTGCTCCTCATGGCCAACGGCGCC
TTCATCCTGGAAGGACTCATCCCCGGCTTCCGCCTGGCGAACGTCTTGCCGACAGCCCTCTACCACCCGCTGGTCTTCGC
CTTTGACATCGTCTCCCTGTTTGCCCTGGCGGCCATCGTCCTCTCCTTTGCCCGGCGGCTCATCTTCAAGCCGGCCTACC
TGGACAGCGCCTACGTAAGCGCCAGAAGTTTCGAGGCGTTCCTCATCCTCTCGTTCATCGCCCTGCTGATGATCGCCTCC
TTCGGCCTGAACGGCGTCAAGATTGTGGGGGGACTGGAGCCGGCCTCCTTCATGCCGGTTTCCGCCGTTGCCGCCAACAT
GCTCGCGGGGAGCGGCGCCAGCCTGCCGGCACTGGGGAGCTTCTTCTGGTGGCTGCACGCCACGGTGCTCCTGGCTTTCA
TCTGTTTCCTCCCCATGAGCAAGCACATGCACATCCTCACCGCCATACCCAACTGCTTCTTCCAGAACCTGGGGAGCACC
AGCACCCAGCCCCGCGAGGAATTCGCTGTCGGCAACCGCTATGGGGTGGAGAAAGTCACCGACTTCACCTGGAAGGACCT
GTTTGATTCCTTCTCCTGTACCGAGTGCGGCCGGTGTCAGGATGCCTGTCCGGCCAACGCCACCGGCAAGTCCCTCAACC
CCCGGCAGGTGGTGCACAGTCTGAAGGCAAACCTGCTGGCCAACGAGCAGGCCCTGAAGGCGGGTGAGCCGCCGCGGGTC
CCCCTAATCGGAGCGGAAGGGGAGGGGACCAACACCGAGGAGACCATCTGGGCCTGTACTACCTGCGGCGCCTGCCTTCA
GGCCTGTCCCGTCATGATCGAGCACCCCTCGAAGCTGGTCAGCATGCGTCGGCATCTGGTGGAGATGAAGACAACATTCC
CCGAAGAGCTCCTGAACCTCTTCGAGAACATGGAGCAGCGCTCAAACCCGTGGGGGATCGCCCCCAGCGAGCGGGCCAAG
TGGGCCGCACAGATGGATGTAAAACCCTTCGAGGCAGGGAAGACCGAGTACCTCTTCTATGTGGGGTGCGCCGGCTCCTT
CGACTCCCGGAGCAAGCAGGTGACGGTGAACGTGGCAACGATCCTTGACGCGGCAGGCATCTCCTGGGGGATTCTCGGCA
AGGACGAGAAGTGCTGCGGCGACAGCCTCCGGCGCCTGGGGAACGAATACGTCTTTGACCGGATGGCCCGGGAGAACGTG
GAGATCTTCCGGGAGCGGGGGGTGACCAAGGTCATCGTCCAGTGCCCCCACTGTTTCACCACCCTCAAGAACGACTACCG
CCAGTACGGTATCGAGCTGGAAGTGATCCACCATTCCGAGCTGATCCAGCAGCTTCTGGACGCCGGGCGGCTGAAGCTGA
ACCGCCAGGTGAGCGAGCTGGGGAAGATCATCCTCCACGACTCCTGCTATCTGGGGCGTCACAACGACGTGTACAAGGCA
CCGCGGCAGGTGGTGGCGAAGGTAACCGGCGCGGTACCGACCGAGTTCGACCGGGCGCGGGAAGAGTCATTCTGCTGCGG
CGCCGGCGGCGGCCGGATGTGGATGGAAGAGCAGACCGGCACCCGGATCAACCTGAACCGGGTCACCGAGGCACTTTCGA
AGAGTCCCGATACCATCTGCGTTGCCTGCCCCTACTGTATGACCATGTTCGAGGACGGTCTCAAGGATAAGCAGGCCGGC
CAGACCAAGGTTCGGGACATAGCCGAGGTGGTTGCCGAGGCGCTGCGTCCGGCGCAGTAG

Upstream 100 bases:

>100_bases
AAAAGAAAGGGCTGATGGATAAAGGTCAAGGGAGTTCGCTCCATTCTCTTTAACCCCAGGCCCAAAAACTAGCCCTTAGA
TTGGCACCGAAAGGTTCGCT

Downstream 100 bases:

>100_bases
GTCATCTCTGGGTAGATATGAAAAAAGGGAGCTTCCTTCGGGGGGCTCCCTTTTTTGTGTTCGCAAGAGCCGAAAGGTTT
GACAGGGATAGGCATCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 658

Protein sequence:

>659_residues
MTIFTPLFLIAIGVFIWQCGKKLSLIRLGRPENRFDNPSLRLWDMLLYAFGQKRVVARPFGLNHFVIFWAFVVLLMANGA
FILEGLIPGFRLANVLPTALYHPLVFAFDIVSLFALAAIVLSFARRLIFKPAYLDSAYVSARSFEAFLILSFIALLMIAS
FGLNGVKIVGGLEPASFMPVSAVAANMLAGSGASLPALGSFFWWLHATVLLAFICFLPMSKHMHILTAIPNCFFQNLGST
STQPREEFAVGNRYGVEKVTDFTWKDLFDSFSCTECGRCQDACPANATGKSLNPRQVVHSLKANLLANEQALKAGEPPRV
PLIGAEGEGTNTEETIWACTTCGACLQACPVMIEHPSKLVSMRRHLVEMKTTFPEELLNLFENMEQRSNPWGIAPSERAK
WAAQMDVKPFEAGKTEYLFYVGCAGSFDSRSKQVTVNVATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARENV
EIFRERGVTKVIVQCPHCFTTLKNDYRQYGIELEVIHHSELIQQLLDAGRLKLNRQVSELGKIILHDSCYLGRHNDVYKA
PRQVVAKVTGAVPTEFDRAREESFCCGAGGGRMWMEEQTGTRINLNRVTEALSKSPDTICVACPYCMTMFEDGLKDKQAG
QTKVRDIAEVVAEALRPAQ

Sequences:

>Translated_659_residues
MTIFTPLFLIAIGVFIWQCGKKLSLIRLGRPENRFDNPSLRLWDMLLYAFGQKRVVARPFGLNHFVIFWAFVVLLMANGA
FILEGLIPGFRLANVLPTALYHPLVFAFDIVSLFALAAIVLSFARRLIFKPAYLDSAYVSARSFEAFLILSFIALLMIAS
FGLNGVKIVGGLEPASFMPVSAVAANMLAGSGASLPALGSFFWWLHATVLLAFICFLPMSKHMHILTAIPNCFFQNLGST
STQPREEFAVGNRYGVEKVTDFTWKDLFDSFSCTECGRCQDACPANATGKSLNPRQVVHSLKANLLANEQALKAGEPPRV
PLIGAEGEGTNTEETIWACTTCGACLQACPVMIEHPSKLVSMRRHLVEMKTTFPEELLNLFENMEQRSNPWGIAPSERAK
WAAQMDVKPFEAGKTEYLFYVGCAGSFDSRSKQVTVNVATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARENV
EIFRERGVTKVIVQCPHCFTTLKNDYRQYGIELEVIHHSELIQQLLDAGRLKLNRQVSELGKIILHDSCYLGRHNDVYKA
PRQVVAKVTGAVPTEFDRAREESFCCGAGGGRMWMEEQTGTRINLNRVTEALSKSPDTICVACPYCMTMFEDGLKDKQAG
QTKVRDIAEVVAEALRPAQ
>Mature_658_residues
TIFTPLFLIAIGVFIWQCGKKLSLIRLGRPENRFDNPSLRLWDMLLYAFGQKRVVARPFGLNHFVIFWAFVVLLMANGAF
ILEGLIPGFRLANVLPTALYHPLVFAFDIVSLFALAAIVLSFARRLIFKPAYLDSAYVSARSFEAFLILSFIALLMIASF
GLNGVKIVGGLEPASFMPVSAVAANMLAGSGASLPALGSFFWWLHATVLLAFICFLPMSKHMHILTAIPNCFFQNLGSTS
TQPREEFAVGNRYGVEKVTDFTWKDLFDSFSCTECGRCQDACPANATGKSLNPRQVVHSLKANLLANEQALKAGEPPRVP
LIGAEGEGTNTEETIWACTTCGACLQACPVMIEHPSKLVSMRRHLVEMKTTFPEELLNLFENMEQRSNPWGIAPSERAKW
AAQMDVKPFEAGKTEYLFYVGCAGSFDSRSKQVTVNVATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARENVE
IFRERGVTKVIVQCPHCFTTLKNDYRQYGIELEVIHHSELIQQLLDAGRLKLNRQVSELGKIILHDSCYLGRHNDVYKAP
RQVVAKVTGAVPTEFDRAREESFCCGAGGGRMWMEEQTGTRINLNRVTEALSKSPDTICVACPYCMTMFEDGLKDKQAGQ
TKVRDIAEVVAEALRPAQ

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 73186; Mature: 73055

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFTPLFLIAIGVFIWQCGKKLSLIRLGRPENRFDNPSLRLWDMLLYAFGQKRVVARPF
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCC
GLNHFVIFWAFVVLLMANGAFILEGLIPGFRLANVLPTALYHPLVFAFDIVSLFALAAIV
CCCHHHHHHHHHHHHHHCCHHEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFARRLIFKPAYLDSAYVSARSFEAFLILSFIALLMIASFGLNGVKIVGGLEPASFMPV
HHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCH
SAVAANMLAGSGASLPALGSFFWWLHATVLLAFICFLPMSKHMHILTAIPNCFFQNLGST
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
STQPREEFAVGNRYGVEKVTDFTWKDLFDSFSCTECGRCQDACPANATGKSLNPRQVVHS
CCCCHHHHHCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LKANLLANEQALKAGEPPRVPLIGAEGEGTNTEETIWACTTCGACLQACPVMIEHPSKLV
HHHHHHCCHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCHHHHH
SMRRHLVEMKTTFPEELLNLFENMEQRSNPWGIAPSERAKWAAQMDVKPFEAGKTEYLFY
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
VGCAGSFDSRSKQVTVNVATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARENV
EECCCCCCCCCCEEEEEHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EIFRERGVTKVIVQCPHCFTTLKNDYRQYGIELEVIHHSELIQQLLDAGRLKLNRQVSEL
HHHHHCCCCEEEHHCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
GKIILHDSCYLGRHNDVYKAPRQVVAKVTGAVPTEFDRAREESFCCGAGGGRMWMEEQTG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCCCEEECCCC
TRINLNRVTEALSKSPDTICVACPYCMTMFEDGLKDKQAGQTKVRDIAEVVAEALRPAQ
CEEEHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIFTPLFLIAIGVFIWQCGKKLSLIRLGRPENRFDNPSLRLWDMLLYAFGQKRVVARPF
CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCC
GLNHFVIFWAFVVLLMANGAFILEGLIPGFRLANVLPTALYHPLVFAFDIVSLFALAAIV
CCCHHHHHHHHHHHHHHCCHHEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFARRLIFKPAYLDSAYVSARSFEAFLILSFIALLMIASFGLNGVKIVGGLEPASFMPV
HHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCH
SAVAANMLAGSGASLPALGSFFWWLHATVLLAFICFLPMSKHMHILTAIPNCFFQNLGST
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
STQPREEFAVGNRYGVEKVTDFTWKDLFDSFSCTECGRCQDACPANATGKSLNPRQVVHS
CCCCHHHHHCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LKANLLANEQALKAGEPPRVPLIGAEGEGTNTEETIWACTTCGACLQACPVMIEHPSKLV
HHHHHHCCHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCHHHHH
SMRRHLVEMKTTFPEELLNLFENMEQRSNPWGIAPSERAKWAAQMDVKPFEAGKTEYLFY
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
VGCAGSFDSRSKQVTVNVATILDAAGISWGILGKDEKCCGDSLRRLGNEYVFDRMARENV
EECCCCCCCCCCEEEEEHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EIFRERGVTKVIVQCPHCFTTLKNDYRQYGIELEVIHHSELIQQLLDAGRLKLNRQVSEL
HHHHHCCCCEEEHHCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
GKIILHDSCYLGRHNDVYKAPRQVVAKVTGAVPTEFDRAREESFCCGAGGGRMWMEEQTG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCCCEEECCCC
TRINLNRVTEALSKSPDTICVACPYCMTMFEDGLKDKQAGQTKVRDIAEVVAEALRPAQ
CEEEHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]