| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221906
Identifier: 78221906
GI number: 78221906
Start: 754085
End: 754717
Strand: Direct
Name: 78221906
Synonym: Gmet_0686
Alternate gene names: NA
Gene position: 754085-754717 (Clockwise)
Preceding gene: 78221905
Following gene: 78221911
Centisome position: 18.86
GC content: 63.67
Gene sequence:
>633_bases ATGACGCAGGACAAGGACGACCGGAAACGGCCCCAACTCCGGCTGGTGGTGAACAACCCCGAGTTGCGGGGGAGCCGTCC CGCCACCGGTGAGGATGCCAGCATCCCTTTCGAGGTGTTGATCGCGAAGCGCCATGAACTTCGGGCGGATTTTTTCAAGG GTATCGCCCCGCAGCACGTGAAGGCCTACGAGCGGATCGAGCGTCATCTGGAGCGCAGGGGGTGGCTCTACGGCCTCGAC CCCCAGCACGGGCGGCTCATGGTGATCCCTGCCGCGACGGCCTGCCCCGAGGTGCTGGAGCATGGGGGCTCTCCCCAGGA CGAGTTGCTCCTCTTCGTGGCTGACGATCCCACGGGGCTCGGACTCTGTCTCTGCCTGGAGATAATCCTTCCCTTCTGGA GCGATGACGACGCCGTCATGGAGGAGGCGCTCATCTATGCGCCCATCTACCCGTACGGCTCCCTTTTCCTTGAGGAGAAC AGGAACGACGGCTACCTGGACCTCATCTACCGGCTCTCGTTTCCCCTCTATCCCCCGGCCCCCACGGAGCGGCTCCTGGA GAAGCTCTTCGCCGTTGCGCGGTACGAATTGCGGGAGACTCTCATTGGGTTGGACGAGTTTCCCGAGGCGTGA
Upstream 100 bases:
>100_bases AAAGGTTTGACAGGGATAGGCATCGGCGGCGTTTCGGGGTATAATCCCCCGGAAACAAGCTGGGATTTGCAACGCGACAC AGGAAAGGGAGCATAACGTC
Downstream 100 bases:
>100_bases GTTCTGATGTGTCGATGATGTTGTCACCGGTTGCTTGCGGGTAGCGGTTGTCGGTAGCGGAAGCGCGCACCTGTCCCGCC TTCCCTGTTGCAAAGCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTQDKDDRKRPQLRLVVNNPELRGSRPATGEDASIPFEVLIAKRHELRADFFKGIAPQHVKAYERIERHLERRGWLYGLD PQHGRLMVIPAATACPEVLEHGGSPQDELLLFVADDPTGLGLCLCLEIILPFWSDDDAVMEEALIYAPIYPYGSLFLEEN RNDGYLDLIYRLSFPLYPPAPTERLLEKLFAVARYELRETLIGLDEFPEA
Sequences:
>Translated_210_residues MTQDKDDRKRPQLRLVVNNPELRGSRPATGEDASIPFEVLIAKRHELRADFFKGIAPQHVKAYERIERHLERRGWLYGLD PQHGRLMVIPAATACPEVLEHGGSPQDELLLFVADDPTGLGLCLCLEIILPFWSDDDAVMEEALIYAPIYPYGSLFLEEN RNDGYLDLIYRLSFPLYPPAPTERLLEKLFAVARYELRETLIGLDEFPEA >Mature_209_residues TQDKDDRKRPQLRLVVNNPELRGSRPATGEDASIPFEVLIAKRHELRADFFKGIAPQHVKAYERIERHLERRGWLYGLDP QHGRLMVIPAATACPEVLEHGGSPQDELLLFVADDPTGLGLCLCLEIILPFWSDDDAVMEEALIYAPIYPYGSLFLEENR NDGYLDLIYRLSFPLYPPAPTERLLEKLFAVARYELRETLIGLDEFPEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24004; Mature: 23873
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDKDDRKRPQLRLVVNNPELRGSRPATGEDASIPFEVLIAKRHELRADFFKGIAPQHV CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH KAYERIERHLERRGWLYGLDPQHGRLMVIPAATACPEVLEHGGSPQDELLLFVADDPTGL HHHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCCHHHHHCCCCCHHHEEEEEECCCCCH GLCLCLEIILPFWSDDDAVMEEALIYAPIYPYGSLFLEENRNDGYLDLIYRLSFPLYPPA HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEHEECCCCCCCCC PTERLLEKLFAVARYELRETLIGLDEFPEA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TQDKDDRKRPQLRLVVNNPELRGSRPATGEDASIPFEVLIAKRHELRADFFKGIAPQHV CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH KAYERIERHLERRGWLYGLDPQHGRLMVIPAATACPEVLEHGGSPQDELLLFVADDPTGL HHHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCCHHHHHCCCCCHHHEEEEEECCCCCH GLCLCLEIILPFWSDDDAVMEEALIYAPIYPYGSLFLEENRNDGYLDLIYRLSFPLYPPA HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEHEECCCCCCCCC PTERLLEKLFAVARYELRETLIGLDEFPEA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA