Click here to switch to the map view.

The map label for this gene is rbr [H]

Identifier: 78221887

GI number: 78221887

Start: 732347

End: 732922

Strand: Reverse

Name: rbr [H]

Synonym: Gmet_0667

Alternate gene names: 78221887

Gene position: 732922-732347 (Counterclockwise)

Preceding gene: 78221888

Following gene: 78221886

Centisome position: 18.33

GC content: 65.1

Gene sequence:

>576_bases
ATGAGCAGCGTCAAGGGAACCAAAACCGAGCAGAACCTCCTGAAATCCTTTGCCGGCGAGAGCCAGGCCCGCAACCGCTA
CACCTACTTTGCCGCCGCGGCAAAAAAAGAAGGGTATGTGCAGATCGCCGACATCTTCGAGGAGACCGCCAACCAGGAGA
AGGAGCACGCCAAGCGCTTCTTCAAGTTCCTGGAAGGGGGCGACCTGGAGATAACCGCCTGCTTCCCGGCCGGCAGAATC
GGCACCACGGCCGAGAACCTCCTGGCCGCAGCCACGGGTGAGCACGAGGAGCACACCGTTCTCTATCCGGGCTTCGCCCA
GGTGGCCCAGGAGGAAGGGTTCCCCGCCATCGCGGCGGCCTGGCGGGCCATCTCCGTGGCGGAAAAGCAGCACGAGAAGC
GCTACCGGGACCTCCTGGCCAACGTCGAGGCCAAGCGGGTCTTCACCCGTGAGGCCGAAGTTGTCTGGCGCTGCCGCAAC
TGCGGCTACCTCCACACCGCCACCGGCGCCCCGGAGCAGTGCCCTGCCTGCGTCCACCCCAAGGACCACTTCGAGCTCCT
GGGGGAGAACTGGTAG

Upstream 100 bases:

>100_bases
CCGGTCTGCCAGGTGCCGAAGGACCGCTTCACCCTGATTGACTGATGGAGCATCCGGCCACAGTGCCCGCTCAACAAAAC
ACCATGAAGGAGATCACCAG

Downstream 100 bases:

>100_bases
CGTGATGAACGTTTCCGTGTAACACGGCAAAAGAGGACATTTCCCCGCAAGGGAGATGTCCTCTTTTGTTGTGACAAACA
CGACCTTTCCGGCACAGCCG

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSSVKGTKTEQNLLKSFAGESQARNRYTYFAAAAKKEGYVQIADIFEETANQEKEHAKRFFKFLEGGDLEITACFPAGRI
GTTAENLLAAATGEHEEHTVLYPGFAQVAQEEGFPAIAAAWRAISVAEKQHEKRYRDLLANVEAKRVFTREAEVVWRCRN
CGYLHTATGAPEQCPACVHPKDHFELLGENW

Sequences:

>Translated_191_residues
MSSVKGTKTEQNLLKSFAGESQARNRYTYFAAAAKKEGYVQIADIFEETANQEKEHAKRFFKFLEGGDLEITACFPAGRI
GTTAENLLAAATGEHEEHTVLYPGFAQVAQEEGFPAIAAAWRAISVAEKQHEKRYRDLLANVEAKRVFTREAEVVWRCRN
CGYLHTATGAPEQCPACVHPKDHFELLGENW
>Mature_190_residues
SSVKGTKTEQNLLKSFAGESQARNRYTYFAAAAKKEGYVQIADIFEETANQEKEHAKRFFKFLEGGDLEITACFPAGRIG
TTAENLLAAATGEHEEHTVLYPGFAQVAQEEGFPAIAAAWRAISVAEKQHEKRYRDLLANVEAKRVFTREAEVVWRCRNC
GYLHTATGAPEQCPACVHPKDHFELLGENW

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 21354; Mature: 21223

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVKGTKTEQNLLKSFAGESQARNRYTYFAAAAKKEGYVQIADIFEETANQEKEHAKRF
CCCCCCCCHHHHHHHHHCCCHHHCCCEEEEEEHHCCCCCCHHHHHHHHHHCHHHHHHHHH
FKFLEGGDLEITACFPAGRIGTTAENLLAAATGEHEEHTVLYPGFAQVAQEEGFPAIAAA
HHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCHHHHHH
WRAISVAEKQHEKRYRDLLANVEAKRVFTREAEVVWRCRNCGYLHTATGAPEQCPACVHP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC
KDHFELLGENW
HHHHHHCCCCC
>Mature Secondary Structure 
SSVKGTKTEQNLLKSFAGESQARNRYTYFAAAAKKEGYVQIADIFEETANQEKEHAKRF
CCCCCCCHHHHHHHHHCCCHHHCCCEEEEEEHHCCCCCCHHHHHHHHHHCHHHHHHHHH
FKFLEGGDLEITACFPAGRIGTTAENLLAAATGEHEEHTVLYPGFAQVAQEEGFPAIAAA
HHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCHHHHHH
WRAISVAEKQHEKRYRDLLANVEAKRVFTREAEVVWRCRNCGYLHTATGAPEQCPACVHP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC
KDHFELLGENW
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1932032; 1657933; 8383040; 1958203; 2835096; 8646540; 10201393; 10968622; 12175244; 12459910 [H]