Click here to switch to the map view.

The map label for this gene is ngr [H]

Identifier: 78221888

GI number: 78221888

Start: 732978

End: 733478

Strand: Reverse

Name: ngr [H]

Synonym: Gmet_0668

Alternate gene names: 78221888

Gene position: 733478-732978 (Counterclockwise)

Preceding gene: 78221895

Following gene: 78221887

Centisome position: 18.35

GC content: 59.48

Gene sequence:

>501_bases
ATGTCCACAAAGGAAAACCTCGCAAATGCCTTTGCCGGCGAAAGCCAGGCCAACCGCAAGTATCTGGCGTTCGCCAAACA
GGCCGAGGTGGACGGCTTCCCCCAGGTGGCGAAACTGTTCCGGGCCGCCGCCCATGCCGAAACCGTCCATGCCCATGCCC
ACCTGCGCGCCATGGGAGGGATAAGGGAAACCGTGGAAAATCTGAAGGAAGCCATAGAGGGAGAAGGGTTCGAGTTCCAG
ACCATGTATCCCCCCTACCTGGAAGAGGCCAAGACAGAAGGGAACCGTGTGGCGGAAATCTCCTTCCGCAACGCCCTGGC
GGTCGAGGAGGTTCACCACGATCTGTACCAGAAGGCTTTAGCAGCAGTCATGAACGACGGCGACCTGCCGGCCCGCAAGG
TTTACGTCTGTGAGATCTGCGGCAACACCGTCTATGACTTTGCACCGGACAAGTGCCCGGTCTGCCAGGTGCCGAAGGAC
CGCTTCACCCTGATTGACTGA

Upstream 100 bases:

>100_bases
GCGCAGAGGGGGTCCACTCTATGCTTTTGACACGGAAAGGAAATGCTGATATTAAAATGTTTCACAGAACGCTACATTAT
TGCAGACAGGGAGGTATTAC

Downstream 100 bases:

>100_bases
TGGAGCATCCGGCCACAGTGCCCGCTCAACAAAACACCATGAAGGAGATCACCAGATGAGCAGCGTCAAGGGAACCAAAA
CCGAGCAGAACCTCCTGAAA

Product: rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSTKENLANAFAGESQANRKYLAFAKQAEVDGFPQVAKLFRAAAHAETVHAHAHLRAMGGIRETVENLKEAIEGEGFEFQ
TMYPPYLEEAKTEGNRVAEISFRNALAVEEVHHDLYQKALAAVMNDGDLPARKVYVCEICGNTVYDFAPDKCPVCQVPKD
RFTLID

Sequences:

>Translated_166_residues
MSTKENLANAFAGESQANRKYLAFAKQAEVDGFPQVAKLFRAAAHAETVHAHAHLRAMGGIRETVENLKEAIEGEGFEFQ
TMYPPYLEEAKTEGNRVAEISFRNALAVEEVHHDLYQKALAAVMNDGDLPARKVYVCEICGNTVYDFAPDKCPVCQVPKD
RFTLID
>Mature_165_residues
STKENLANAFAGESQANRKYLAFAKQAEVDGFPQVAKLFRAAAHAETVHAHAHLRAMGGIRETVENLKEAIEGEGFEFQT
MYPPYLEEAKTEGNRVAEISFRNALAVEEVHHDLYQKALAAVMNDGDLPARKVYVCEICGNTVYDFAPDKCPVCQVPKDR
FTLID

Specific function: Exhibits NADH peroxidase activity (in vitro) [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 18449; Mature: 18318

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKENLANAFAGESQANRKYLAFAKQAEVDGFPQVAKLFRAAAHAETVHAHAHLRAMGG
CCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRETVENLKEAIEGEGFEFQTMYPPYLEEAKTEGNRVAEISFRNALAVEEVHHDLYQKAL
HHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
AAVMNDGDLPARKVYVCEICGNTVYDFAPDKCPVCQVPKDRFTLID
HHHHCCCCCCHHHEEEEEECCCCEECCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
STKENLANAFAGESQANRKYLAFAKQAEVDGFPQVAKLFRAAAHAETVHAHAHLRAMGG
CCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRETVENLKEAIEGEGFEFQTMYPPYLEEAKTEGNRVAEISFRNALAVEEVHHDLYQKAL
HHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
AAVMNDGDLPARKVYVCEICGNTVYDFAPDKCPVCQVPKDRFTLID
HHHHCCCCCCHHHEEEEEECCCCEECCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9226272; 8383040 [H]