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The map label for this gene is secY

Identifier: 78221866

GI number: 78221866

Start: 708986

End: 710293

Strand: Direct

Name: secY

Synonym: Gmet_0646

Alternate gene names: 78221866

Gene position: 708986-710293 (Clockwise)

Preceding gene: 78221865

Following gene: 78221867

Centisome position: 17.74

GC content: 48.09

Gene sequence:

>1308_bases
TTGATAGAGGCGTTTCAAAACATCTTCAGAATACCGGAACTTAAAAAGCGAGTTCTTTTTTCATTAGGGATGCTCGCCGT
TTACCGGGTAGGGTGCCATATTCCGACTCCAGGGATCGACAGCACCGCACTTGCACACTTCTTTGCACAAGCCCGTGGTA
CACTCCTCGGGCTTTTCGACATGTTTTCGGGGGGTGCTCTGGAGAAGCTTACGGTATTTGCTCTGGGCATCATGCCGTAC
ATTTCGTCCTCTATTATCTTTCAGTTGTTGACGGTAGTTGTCCCTGCCATCGAAAAACTTTCAAAAGAAGGCGAATCTGG
CCGCAAGAAGATTATTCAGTACACGCGGTATGGAACTATCGTTTTGAGCGTTGTTCAGGCTCTGGGCATTAGTATCGGAC
TCGAAAGCATGCGTGGACCAGCCGGTGAGCTTGTGGTGCCGAGTCCTGGCTGGGGATTTAGATTTATGACCGTTATTACT
CTGACCGCTGGCACAGCCTTCATTATGTGGCTTGGCGAGCAGATGTCGGAGAAGGGCATTGGTAACGGTATCTCCTTGAT
CATTTTTGCCGGTATTGTTGCAAGGATTCCGGTGGCGCTGGGCAACTCGGTGCGGCTGCTCAAGACAGGTCAAATTTCTC
TCTTTGTAATCTTGTTTATACTTGTTCTCATGTTCTTGGTTATCGCTGCGATCGTTTTTGTTGAGCGCGGCCAGCGCCGA
TTGCCAATACACTATGCTAAACGTGTCGTAGGGCTGAAGACGTACGGTGGTCAGACGTCCCACCTTCCTCTCAAGGTAAA
TATGGCGGGGGTAATACCGCCGATCTTTGCTTCTTCGATAATTATGTTTCCTGCAACAGTGGCAAACTTCATTAATATTC
CCTGGGTCCAATCCGCAGCAAAGAGCCTGACGCCCGGCAACTGGGTATATGACATATTTTATGTTGCTTTTATCGTATTC
TTCTGTTATTTCTACACGGCTGTTTCTTTTAACCCCGTCGATGTGGCAGATAACGTTAAAAAGCACGGCGGTTATATACC
AGGCATTCGCCCCGGTAAGGAAACCTCCGAGTATTTGGATCGAGTGCTCACGAAGTTGACGTTTGCAGGTGCGATTTATA
TTTCAGCTGTTTGCGTTCTTCCTTCTATTCTTATAGGTAAATTCAATTTGCCGTTTTACTTTGGAGGAACGGCGCTCCTT
ATTGCGGTGGGTGTGGGGATGGATACCGCTGCTCAGATTGAGTCCCATTTGATAACCCGGAGTTATGAAGGGTTTATGAA
GGGGGTAAGGGTTAGGGGGAGGAAGTAG

Upstream 100 bases:

>100_bases
GTGATGTGACCAAGTCTCTCGTTGTCAAGGTTCACAAATACAGTGCAAAGGCAAAAGAGAAGATTGAAGCAGTTGGCGGT
AAAATTGAGGAGATCACGCT

Downstream 100 bases:

>100_bases
TGTCTGGAAATGAAAATGCGATGAATTTGATTTTCCTTGGTCCTCCTGGCGCAGGCAAGGGGACGCAAGCTAACCTTCTT
GTCGGTACGTATGGCATTCC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MIEAFQNIFRIPELKKRVLFSLGMLAVYRVGCHIPTPGIDSTALAHFFAQARGTLLGLFDMFSGGALEKLTVFALGIMPY
ISSSIIFQLLTVVVPAIEKLSKEGESGRKKIIQYTRYGTIVLSVVQALGISIGLESMRGPAGELVVPSPGWGFRFMTVIT
LTAGTAFIMWLGEQMSEKGIGNGISLIIFAGIVARIPVALGNSVRLLKTGQISLFVILFILVLMFLVIAAIVFVERGQRR
LPIHYAKRVVGLKTYGGQTSHLPLKVNMAGVIPPIFASSIIMFPATVANFINIPWVQSAAKSLTPGNWVYDIFYVAFIVF
FCYFYTAVSFNPVDVADNVKKHGGYIPGIRPGKETSEYLDRVLTKLTFAGAIYISAVCVLPSILIGKFNLPFYFGGTALL
IAVGVGMDTAAQIESHLITRSYEGFMKGVRVRGRK

Sequences:

>Translated_435_residues
MIEAFQNIFRIPELKKRVLFSLGMLAVYRVGCHIPTPGIDSTALAHFFAQARGTLLGLFDMFSGGALEKLTVFALGIMPY
ISSSIIFQLLTVVVPAIEKLSKEGESGRKKIIQYTRYGTIVLSVVQALGISIGLESMRGPAGELVVPSPGWGFRFMTVIT
LTAGTAFIMWLGEQMSEKGIGNGISLIIFAGIVARIPVALGNSVRLLKTGQISLFVILFILVLMFLVIAAIVFVERGQRR
LPIHYAKRVVGLKTYGGQTSHLPLKVNMAGVIPPIFASSIIMFPATVANFINIPWVQSAAKSLTPGNWVYDIFYVAFIVF
FCYFYTAVSFNPVDVADNVKKHGGYIPGIRPGKETSEYLDRVLTKLTFAGAIYISAVCVLPSILIGKFNLPFYFGGTALL
IAVGVGMDTAAQIESHLITRSYEGFMKGVRVRGRK
>Mature_435_residues
MIEAFQNIFRIPELKKRVLFSLGMLAVYRVGCHIPTPGIDSTALAHFFAQARGTLLGLFDMFSGGALEKLTVFALGIMPY
ISSSIIFQLLTVVVPAIEKLSKEGESGRKKIIQYTRYGTIVLSVVQALGISIGLESMRGPAGELVVPSPGWGFRFMTVIT
LTAGTAFIMWLGEQMSEKGIGNGISLIIFAGIVARIPVALGNSVRLLKTGQISLFVILFILVLMFLVIAAIVFVERGQRR
LPIHYAKRVVGLKTYGGQTSHLPLKVNMAGVIPPIFASSIIMFPATVANFINIPWVQSAAKSLTPGNWVYDIFYVAFIVF
FCYFYTAVSFNPVDVADNVKKHGGYIPGIRPGKETSEYLDRVLTKLTFAGAIYISAVCVLPSILIGKFNLPFYFGGTALL
IAVGVGMDTAAQIESHLITRSYEGFMKGVRVRGRK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=425, Percent_Identity=52, Blast_Score=419, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47441; Mature: 47441

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEAFQNIFRIPELKKRVLFSLGMLAVYRVGCHIPTPGIDSTALAHFFAQARGTLLGLFD
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MFSGGALEKLTVFALGIMPYISSSIIFQLLTVVVPAIEKLSKEGESGRKKIIQYTRYGTI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VLSVVQALGISIGLESMRGPAGELVVPSPGWGFRFMTVITLTAGTAFIMWLGEQMSEKGI
HHHHHHHHHHHHCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNGISLIIFAGIVARIPVALGNSVRLLKTGQISLFVILFILVLMFLVIAAIVFVERGQRR
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPIHYAKRVVGLKTYGGQTSHLPLKVNMAGVIPPIFASSIIMFPATVANFINIPWVQSAA
CCHHHHHHHHHHEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
KSLTPGNWVYDIFYVAFIVFFCYFYTAVSFNPVDVADNVKKHGGYIPGIRPGKETSEYLD
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
RVLTKLTFAGAIYISAVCVLPSILIGKFNLPFYFGGTALLIAVGVGMDTAAQIESHLITR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHH
SYEGFMKGVRVRGRK
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MIEAFQNIFRIPELKKRVLFSLGMLAVYRVGCHIPTPGIDSTALAHFFAQARGTLLGLFD
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MFSGGALEKLTVFALGIMPYISSSIIFQLLTVVVPAIEKLSKEGESGRKKIIQYTRYGTI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VLSVVQALGISIGLESMRGPAGELVVPSPGWGFRFMTVITLTAGTAFIMWLGEQMSEKGI
HHHHHHHHHHHHCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNGISLIIFAGIVARIPVALGNSVRLLKTGQISLFVILFILVLMFLVIAAIVFVERGQRR
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPIHYAKRVVGLKTYGGQTSHLPLKVNMAGVIPPIFASSIIMFPATVANFINIPWVQSAA
CCHHHHHHHHHHEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
KSLTPGNWVYDIFYVAFIVFFCYFYTAVSFNPVDVADNVKKHGGYIPGIRPGKETSEYLD
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
RVLTKLTFAGAIYISAVCVLPSILIGKFNLPFYFGGTALLIAVGVGMDTAAQIESHLITR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHH
SYEGFMKGVRVRGRK
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]