| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221801
Identifier: 78221801
GI number: 78221801
Start: 633445
End: 636054
Strand: Direct
Name: 78221801
Synonym: Gmet_0580
Alternate gene names: NA
Gene position: 633445-636054 (Clockwise)
Preceding gene: 78221800
Following gene: 78221802
Centisome position: 15.85
GC content: 62.03
Gene sequence:
>2610_bases ATGGGTACGGAGAATAGAACGAAACGAACCTCTGGTGCAGTACCAGTGCTGGTTGCCTTTGCGGCTTCGATGGCGCTGGT ACTCTTCGTTTTGTGCGGTACGACCCCTGTCCACGCTGGAACCATCACCAGCTGTTCCGGCTGTCACGGCATGCCGCCGG CGGACGCCGCCTTCCGCAACATCTCCACCGGCGGCTTTGCCGGCAATCACGGTACCCATCTCGGCGCTTCCGCCAGTGCC GGCGACTGTACCAGGTGCCACAATAATTCCGGTTATCTCAACAGCCACCGGGACGGCAAAATTCAGCTGGCGTCCAATAT CAATACCTCGCCGGCTCCCGGCGGCGGCCTGTACAAGGTATCCGGATCGGCAGTCACCTTCTGGAACCAGACGTCCATTC CGGTCCCCGGGTCATGCAGCAACGTCAACTGCCACTTCGAGGCGGCAACTCCCCTGTGGGGCTCCACGGCGTTCACCTCT CCGGCCGATTGCAATAAATGTCACGGCGCCCCGCCAAGTGGCGGAACATCGGGCGCGGCCGGCAGCCACTCCCGGCACGA CCAGTACTATGCCGGTGTCGCCAACTGCCAGAAGTGCCATTCAAACAATACGACCTTCCAGCATGCCACCAGCGCCGGGC ATCGCAATCTGAACATCAGCTTCGCCGCCGCCCCCAACAACGGCAGCGGCGTCTATTCCGGCCCCCTCAATGATTACCTG CCGAGCCAGATCAATGGGTTCGGCACCTGCACCAGCCTCTACTGCCACAGTAACGGCCAGAAAAGCATGGGCAACTTCTC CACCGTCACCGTACCGACCTGGGGAACCCCCCTGCCGGCCAACTGCACGGGGTGCCACAGGTCCAACAACGCCTCCGGCA ACGCCATGGCCACCGGCAGCCATAAACGGCACGTGGGTACTGATTCGCAAGGTTATTCAAACAACATAGCCTGTGCAAAG TGCCATGCCGCCACGGTCAACGGCACCATGGCCATTGCGGACACCACCGTCCACGTCAACGCCAAGGTTAATATCAAGTT CAACAGCCTCACCACTGCCGTCAACGGCACCTATGGGGGCCAGGCGACCCCCTATGCCAAGGATCCTGGCACCGCTTACG GCCAGTGCAACAATGTCTACTGCCATTCGAACGTCCAGAACGACGGCGGGGTCGGCATAACCTACCGGCAGCCCACGTGG GGCAATGGGGCGAGCGGCACCTGCGGCACCTGTCACGGCGGCGGCAACCACTTTATGGAGGCTGATATTGCGACCGGCAG CCATACCAAGCATCTGTCATCGACAGCGACTCCCTATACCATGGCGACACGCTGCATAGTCTGTCACAACGTCGGCGGAT TGCCGTTCAACGGCAGCTGCAACAATTCGTGCCATAGCGGGCTATCGCGGCACACTGACGGGAAGATAGACCTTGCGTTC CCGTCCAATTTCGGTGCTACGGCGGCCTACAACGGCACCCCGAGGCCGGGCAACGGCTACAGCACCTGCTCCAACGTCAA CTGCCACTACAGCACCACCACCCCGACCTGGGGAACGTCGACCCCCATCGGCTGCCTCGGCTGCCACACCCTTGCCGTGC TGCGGGCCAGCGGCGCCCATGCCAAGCATATCAGCGCCACCGCCTCGCCGACCATGTACAACTACACCGCCAACCGCTCC ACGGCGACGGAATACGACTTCGGCTGCTCCAACTGCCATCCTGTCACCGCAACGGGCAATCACTACAATTCGGTCATCAA CGTGACCCTCAAGAAGGATGAGGCCGGGGTGGGCTCCCTGCGCGCCAAAAACAGTGCCACGGCGGTCGGCGTCAACGTCG CCAACAGCGGCATCACCGGCACAACCAAAGTCAGCATCAGGTGCTCGATGGCCTACTGCCACAGCAACGGCAACGCCGCC GGCCTGGTCTACGCCACCACGCCGGACTGGTACGGCGGCAGCTTCACCGGCGACCGCTGCGCCAACTGCCACGGCAACGC CCCCAACACCACCATTGCCGGTTCCAAGTCCCACTACAACAACCGCTTCCTCGGCTACACCAGCAACCCGGGGGGGCACC AGATTGCAATCCATGCCATGGGGATCTACAGCAGCCCGAGCGGCCTGGCCAAGGCGGGCACCGGCAATGACAGCAGCCAC GGCAATGCCGCCACATCAACAACCATCGGCTGCAATATCTGCCACTACCTGACGGTCACCACCGCCCGCAACGATGACAA CTTTGTCTGCAAAACCTGCCACTATGCCGGCAATACCGTGGGCGCCCTGGCCGGAAACCCGGCCGCCATCGCCGACCGGT CGAAGCACGTCAACGGAACGGCCGATGTGGCGTTCCAGCCGGTTACCGTGCTTTCCAAGGCGCAGATGCGGCAGATCTAC TTCACGTCATACAGCGGCACCTTCAAGCGCAACGGCGTGTACAAGACCTCCGGCGCGTACGACTCCGCCAAGGCAGCGCT CAACACGGCAACCATGTGGGACGGCGGCAGCAAGACCTGCTCCAATGTCGCCTGCCATAACAGCCAGAGCGTGAAATGGA CCGATAATGACGGCGCGACAACGTGTGTCAATTGCCATAACGCCATGTAA
Upstream 100 bases:
>100_bases GGCCGAATTAACAGTGGTTTGACAGGCTGGTGTCATAATTTTGCTTTTTTTGAACGTCTGGACGTTGTTGTGCTCATCAT GATTTGACGTGGGGGAAGTC
Downstream 100 bases:
>100_bases CCGGTAAGGTATGCGCTTCGTACAGGGGGGAGGTGTTTTTGCCCCTGTACGTCGTAACAAAGTAACGGACTTTCCAGCAC TGAACGAGGGAACTTATATG
Product: high-molecular-weight cytochrome c
Products: NA
Alternate protein names: High-Molecular-Weight Cytochrome C; Cytochrome C; Multihaem Cytochrome
Number of amino acids: Translated: 869; Mature: 868
Protein sequence:
>869_residues MGTENRTKRTSGAVPVLVAFAASMALVLFVLCGTTPVHAGTITSCSGCHGMPPADAAFRNISTGGFAGNHGTHLGASASA GDCTRCHNNSGYLNSHRDGKIQLASNINTSPAPGGGLYKVSGSAVTFWNQTSIPVPGSCSNVNCHFEAATPLWGSTAFTS PADCNKCHGAPPSGGTSGAAGSHSRHDQYYAGVANCQKCHSNNTTFQHATSAGHRNLNISFAAAPNNGSGVYSGPLNDYL PSQINGFGTCTSLYCHSNGQKSMGNFSTVTVPTWGTPLPANCTGCHRSNNASGNAMATGSHKRHVGTDSQGYSNNIACAK CHAATVNGTMAIADTTVHVNAKVNIKFNSLTTAVNGTYGGQATPYAKDPGTAYGQCNNVYCHSNVQNDGGVGITYRQPTW GNGASGTCGTCHGGGNHFMEADIATGSHTKHLSSTATPYTMATRCIVCHNVGGLPFNGSCNNSCHSGLSRHTDGKIDLAF PSNFGATAAYNGTPRPGNGYSTCSNVNCHYSTTTPTWGTSTPIGCLGCHTLAVLRASGAHAKHISATASPTMYNYTANRS TATEYDFGCSNCHPVTATGNHYNSVINVTLKKDEAGVGSLRAKNSATAVGVNVANSGITGTTKVSIRCSMAYCHSNGNAA GLVYATTPDWYGGSFTGDRCANCHGNAPNTTIAGSKSHYNNRFLGYTSNPGGHQIAIHAMGIYSSPSGLAKAGTGNDSSH GNAATSTTIGCNICHYLTVTTARNDDNFVCKTCHYAGNTVGALAGNPAAIADRSKHVNGTADVAFQPVTVLSKAQMRQIY FTSYSGTFKRNGVYKTSGAYDSAKAALNTATMWDGGSKTCSNVACHNSQSVKWTDNDGATTCVNCHNAM
Sequences:
>Translated_869_residues MGTENRTKRTSGAVPVLVAFAASMALVLFVLCGTTPVHAGTITSCSGCHGMPPADAAFRNISTGGFAGNHGTHLGASASA GDCTRCHNNSGYLNSHRDGKIQLASNINTSPAPGGGLYKVSGSAVTFWNQTSIPVPGSCSNVNCHFEAATPLWGSTAFTS PADCNKCHGAPPSGGTSGAAGSHSRHDQYYAGVANCQKCHSNNTTFQHATSAGHRNLNISFAAAPNNGSGVYSGPLNDYL PSQINGFGTCTSLYCHSNGQKSMGNFSTVTVPTWGTPLPANCTGCHRSNNASGNAMATGSHKRHVGTDSQGYSNNIACAK CHAATVNGTMAIADTTVHVNAKVNIKFNSLTTAVNGTYGGQATPYAKDPGTAYGQCNNVYCHSNVQNDGGVGITYRQPTW GNGASGTCGTCHGGGNHFMEADIATGSHTKHLSSTATPYTMATRCIVCHNVGGLPFNGSCNNSCHSGLSRHTDGKIDLAF PSNFGATAAYNGTPRPGNGYSTCSNVNCHYSTTTPTWGTSTPIGCLGCHTLAVLRASGAHAKHISATASPTMYNYTANRS TATEYDFGCSNCHPVTATGNHYNSVINVTLKKDEAGVGSLRAKNSATAVGVNVANSGITGTTKVSIRCSMAYCHSNGNAA GLVYATTPDWYGGSFTGDRCANCHGNAPNTTIAGSKSHYNNRFLGYTSNPGGHQIAIHAMGIYSSPSGLAKAGTGNDSSH GNAATSTTIGCNICHYLTVTTARNDDNFVCKTCHYAGNTVGALAGNPAAIADRSKHVNGTADVAFQPVTVLSKAQMRQIY FTSYSGTFKRNGVYKTSGAYDSAKAALNTATMWDGGSKTCSNVACHNSQSVKWTDNDGATTCVNCHNAM >Mature_868_residues GTENRTKRTSGAVPVLVAFAASMALVLFVLCGTTPVHAGTITSCSGCHGMPPADAAFRNISTGGFAGNHGTHLGASASAG DCTRCHNNSGYLNSHRDGKIQLASNINTSPAPGGGLYKVSGSAVTFWNQTSIPVPGSCSNVNCHFEAATPLWGSTAFTSP ADCNKCHGAPPSGGTSGAAGSHSRHDQYYAGVANCQKCHSNNTTFQHATSAGHRNLNISFAAAPNNGSGVYSGPLNDYLP SQINGFGTCTSLYCHSNGQKSMGNFSTVTVPTWGTPLPANCTGCHRSNNASGNAMATGSHKRHVGTDSQGYSNNIACAKC HAATVNGTMAIADTTVHVNAKVNIKFNSLTTAVNGTYGGQATPYAKDPGTAYGQCNNVYCHSNVQNDGGVGITYRQPTWG NGASGTCGTCHGGGNHFMEADIATGSHTKHLSSTATPYTMATRCIVCHNVGGLPFNGSCNNSCHSGLSRHTDGKIDLAFP SNFGATAAYNGTPRPGNGYSTCSNVNCHYSTTTPTWGTSTPIGCLGCHTLAVLRASGAHAKHISATASPTMYNYTANRST ATEYDFGCSNCHPVTATGNHYNSVINVTLKKDEAGVGSLRAKNSATAVGVNVANSGITGTTKVSIRCSMAYCHSNGNAAG LVYATTPDWYGGSFTGDRCANCHGNAPNTTIAGSKSHYNNRFLGYTSNPGGHQIAIHAMGIYSSPSGLAKAGTGNDSSHG NAATSTTIGCNICHYLTVTTARNDDNFVCKTCHYAGNTVGALAGNPAAIADRSKHVNGTADVAFQPVTVLSKAQMRQIYF TSYSGTFKRNGVYKTSGAYDSAKAALNTATMWDGGSKTCSNVACHNSQSVKWTDNDGATTCVNCHNAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89577; Mature: 89446
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTENRTKRTSGAVPVLVAFAASMALVLFVLCGTTPVHAGTITSCSGCHGMPPADAAFRN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHC ISTGGFAGNHGTHLGASASAGDCTRCHNNSGYLNSHRDGKIQLASNINTSPAPGGGLYKV CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE SGSAVTFWNQTSIPVPGSCSNVNCHFEAATPLWGSTAFTSPADCNKCHGAPPSGGTSGAA CCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC GSHSRHDQYYAGVANCQKCHSNNTTFQHATSAGHRNLNISFAAAPNNGSGVYSGPLNDYL CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEECCCCHHCC PSQINGFGTCTSLYCHSNGQKSMGNFSTVTVPTWGTPLPANCTGCHRSNNASGNAMATGS CHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCC HKRHVGTDSQGYSNNIACAKCHAATVNGTMAIADTTVHVNAKVNIKFNSLTTAVNGTYGG CCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEEEEEEEEEECCEEEEECCCCCC QATPYAKDPGTAYGQCNNVYCHSNVQNDGGVGITYRQPTWGNGASGTCGTCHGGGNHFME CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCEEE ADIATGSHTKHLSSTATPYTMATRCIVCHNVGGLPFNGSCNNSCHSGLSRHTDGKIDLAF EEECCCCCCHHCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCHHHHCHHHCCCCEEEEEC PSNFGATAAYNGTPRPGNGYSTCSNVNCHYSTTTPTWGTSTPIGCLGCHTLAVLRASGAH CCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC AKHISATASPTMYNYTANRSTATEYDFGCSNCHPVTATGNHYNSVINVTLKKDEAGVGSL CEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCE RAKNSATAVGVNVANSGITGTTKVSIRCSMAYCHSNGNAAGLVYATTPDWYGGSFTGDRC ECCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCC ANCHGNAPNTTIAGSKSHYNNRFLGYTSNPGGHQIAIHAMGIYSSPSGLAKAGTGNDSSH CCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCC GNAATSTTIGCNICHYLTVTTARNDDNFVCKTCHYAGNTVGALAGNPAAIADRSKHVNGT CCCCCEEEECCEEEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCHHCCCCCCCCCCC ADVAFQPVTVLSKAQMRQIYFTSYSGTFKRNGVYKTSGAYDSAKAALNTATMWDGGSKTC CCEEECCHHHHHHHHEEEEEEEECCCCEECCCEEEECCCCCHHHHHEEEEEEECCCCCCC SNVACHNSQSVKWTDNDGATTCVNCHNAM CCEEECCCCCEEEECCCCCEEEEECCCCC >Mature Secondary Structure GTENRTKRTSGAVPVLVAFAASMALVLFVLCGTTPVHAGTITSCSGCHGMPPADAAFRN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHC ISTGGFAGNHGTHLGASASAGDCTRCHNNSGYLNSHRDGKIQLASNINTSPAPGGGLYKV CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE SGSAVTFWNQTSIPVPGSCSNVNCHFEAATPLWGSTAFTSPADCNKCHGAPPSGGTSGAA CCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC GSHSRHDQYYAGVANCQKCHSNNTTFQHATSAGHRNLNISFAAAPNNGSGVYSGPLNDYL CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEECCCCHHCC PSQINGFGTCTSLYCHSNGQKSMGNFSTVTVPTWGTPLPANCTGCHRSNNASGNAMATGS CHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCC HKRHVGTDSQGYSNNIACAKCHAATVNGTMAIADTTVHVNAKVNIKFNSLTTAVNGTYGG CCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEEEEEEEEEECCEEEEECCCCCC QATPYAKDPGTAYGQCNNVYCHSNVQNDGGVGITYRQPTWGNGASGTCGTCHGGGNHFME CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCEEE ADIATGSHTKHLSSTATPYTMATRCIVCHNVGGLPFNGSCNNSCHSGLSRHTDGKIDLAF EEECCCCCCHHCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCHHHHCHHHCCCCEEEEEC PSNFGATAAYNGTPRPGNGYSTCSNVNCHYSTTTPTWGTSTPIGCLGCHTLAVLRASGAH CCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC AKHISATASPTMYNYTANRSTATEYDFGCSNCHPVTATGNHYNSVINVTLKKDEAGVGSL CEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCE RAKNSATAVGVNVANSGITGTTKVSIRCSMAYCHSNGNAAGLVYATTPDWYGGSFTGDRC ECCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCC ANCHGNAPNTTIAGSKSHYNNRFLGYTSNPGGHQIAIHAMGIYSSPSGLAKAGTGNDSSH CCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCC GNAATSTTIGCNICHYLTVTTARNDDNFVCKTCHYAGNTVGALAGNPAAIADRSKHVNGT CCCCCEEEECCEEEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCHHCCCCCCCCCCC ADVAFQPVTVLSKAQMRQIYFTSYSGTFKRNGVYKTSGAYDSAKAALNTATMWDGGSKTC CCEEECCHHHHHHHHEEEEEEEECCCCEECCCEEEECCCCCHHHHHEEEEEEECCCCCCC SNVACHNSQSVKWTDNDGATTCVNCHNAM CCEEECCCCCEEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA