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The map label for this gene is ccsA [H]

Identifier: 78221800

GI number: 78221800

Start: 632149

End: 632958

Strand: Direct

Name: ccsA [H]

Synonym: Gmet_0579

Alternate gene names: 78221800

Gene position: 632149-632958 (Clockwise)

Preceding gene: 78221799

Following gene: 78221801

Centisome position: 15.81

GC content: 59.75

Gene sequence:

>810_bases
ATGGACGTCATTTTTTTCTGGATAGCGACAACACTTTATGCCCTGTCGGCGGTGCTGTACCTGATCCACTTCATCTTCGA
CAAAAAGTGGGGCGAGAAGGGGGCGGCGGCGCTGGCGGCAGGGGGGATCGTGCCCCACGTGGCTGCCGTCGCCATGCGCT
GGGTGCAGGCCGGACACGGTCCCTACATCACCCGTTACGAGGTTTTTTCATCCGATGCGCTCATCGCGGTTGCAGTCTTC
CTCGCGGCCGGCCTTTTGTACCGGAAGATCAGGGTCGCGGGGGCGATCGTCATGAGCGGAGCCTTTCTGATGATGGGATA
CGGTGCCCTGTCGGTGGATACCAAGGCTGCGGCGCCGATCACCTTCAAGAGTTGGTGGTTGGTCATCCACATCCTGTTCG
GCAAGGTTATCACCGGAGCCATGCTGATTGCGGGGGCGCTTGCCGTCTTCTATCTCTTGAAGAGCAAACGGCCCGAACGC
TGGCCAAGACTTCCTGACGTGGCCTCGCTCGACGACCTCTCGTACCGCTTTCTGTCACTGGGCTTCTGCGCTCTGGGGCT
GATGATCGTCGCCGGTTCCATCTGGGCCAACAGCGCATGGGGGCGATACTGGGGGTGGGATCCCATCGAAACGTGGTCTC
TCATCTCCTGGATAACCGTCGGCGCCATACTCCACCTGCGTCGTCTCCACGGGTGGCGTGGCAGAAGGATGGCCTGGCTC
ACCATTGCGGCACTTCTTCTCGCCATATTCACCGCCTTCCTTATCACCATTGTCAGCCCCGGCATTCACAGCAGTTACAT
GGTCAAATAG

Upstream 100 bases:

>100_bases
GGGCAGGGGGGACGGACTCCGTTCATGTCGCTGTCCGGTGCGAGCGGTTCAGGTCGGTGGCCGAGCGGATCCTCGAACAA
ATCACGGAGGAAAGAACCTG

Downstream 100 bases:

>100_bases
TGTATTCACCCAGCGTTGGCACGTGGGAAGCTTTACAATGTGCCATCCGATCGTCGGTTGTAAGGGTCGCGGAAAGGTGT
GCCACGGCCGTTCGGCAGAT

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MDVIFFWIATTLYALSAVLYLIHFIFDKKWGEKGAAALAAGGIVPHVAAVAMRWVQAGHGPYITRYEVFSSDALIAVAVF
LAAGLLYRKIRVAGAIVMSGAFLMMGYGALSVDTKAAAPITFKSWWLVIHILFGKVITGAMLIAGALAVFYLLKSKRPER
WPRLPDVASLDDLSYRFLSLGFCALGLMIVAGSIWANSAWGRYWGWDPIETWSLISWITVGAILHLRRLHGWRGRRMAWL
TIAALLLAIFTAFLITIVSPGIHSSYMVK

Sequences:

>Translated_269_residues
MDVIFFWIATTLYALSAVLYLIHFIFDKKWGEKGAAALAAGGIVPHVAAVAMRWVQAGHGPYITRYEVFSSDALIAVAVF
LAAGLLYRKIRVAGAIVMSGAFLMMGYGALSVDTKAAAPITFKSWWLVIHILFGKVITGAMLIAGALAVFYLLKSKRPER
WPRLPDVASLDDLSYRFLSLGFCALGLMIVAGSIWANSAWGRYWGWDPIETWSLISWITVGAILHLRRLHGWRGRRMAWL
TIAALLLAIFTAFLITIVSPGIHSSYMVK
>Mature_269_residues
MDVIFFWIATTLYALSAVLYLIHFIFDKKWGEKGAAALAAGGIVPHVAAVAMRWVQAGHGPYITRYEVFSSDALIAVAVF
LAAGLLYRKIRVAGAIVMSGAFLMMGYGALSVDTKAAAPITFKSWWLVIHILFGKVITGAMLIAGALAVFYLLKSKRPER
WPRLPDVASLDDLSYRFLSLGFCALGLMIVAGSIWANSAWGRYWGWDPIETWSLISWITVGAILHLRRLHGWRGRRMAWL
TIAALLLAIFTAFLITIVSPGIHSSYMVK

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 29709; Mature: 29709

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]