| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221799
Identifier: 78221799
GI number: 78221799
Start: 630833
End: 632149
Strand: Direct
Name: 78221799
Synonym: Gmet_0578
Alternate gene names: NA
Gene position: 630833-632149 (Clockwise)
Preceding gene: 78221798
Following gene: 78221800
Centisome position: 15.78
GC content: 61.05
Gene sequence:
>1317_bases ATGCAACGCCTGGCTTCGCGGCGTGTTTCCCTGACGCTTATCCTGATGCTCCTCTGCATATGCGTCATCGGCGCATTGGT CCCCCAGAAGTCGACCCTGGAGCCGGAGAGCTATGCCGCATGGGTCGCAGCCGGAGGGGTCCACGATCTCTGGCTGAAGC TCGGATTTACCCGCATTTTTTCAACCTGGTATTTTCTCGCGGTCATGATCCTCTTCTTCGCCAGCACCCTCGCTGCGACG ATAATACGCGCCCGGGGCCTGCTGAGACGGGAGAAGCCGGAGCCGAGCGCCGCAGCCATGGTGGGGGAGCCCTTTTCGAC AACGGTTTCCGGCGTACCGCTGGAAAAGTTGAAATTGCGGGTTTCGGGCTTTTCCTGGCACGAAGGGCTCTGTGCTGACG GCAGATACCTTGCCGGCACACGCTTCGGGATCGCACGGTGGTCCGTCGTGTCGCTCCACCTGTCGTTGCTGTTGCTCATC CTCGGCGTTCTCGCGAGCCACGCCACCTATTTTCGCGGCTATATGAAGCTGGGAGTGGGGCAGAGTGAACAACTCGACGA ATCGGGCTTTTTCCAGCAGGACAGGGGGATGTTTGCCCCGGCTCTCCCGCAAGGGCTCAAGATCACGCTTCTTTCCTTCG ATAACCGGTATCGGGAAGCGGGTTATCTCCCCGACATTGCGGCGGATTTTCTGCTGGAAGGCGCAGCCGGAGGCCCCCTC AGGACGAGGCTCCTCCGCTCCGGGATGGTATCCTATGGTGGGCTCGACCTCTATCTCTCCGTCCGTCGTGGCTTCGGGGT CATCCTCCACACGGTGCGCCGGGACGGTGGGCGGGCATCGGGCTACGTTAATTTCAACTTTCCCGAGGGGGGGAAAACTC CCCGGGTCCAAGCCGAAATACCCGGTTCCAATGCGCAGGTTGACGTTGAGTTCCTCTCCCGCAACCGCAGGTACGACGAC TTGGCCGGGATTGCAGCACCGGCAATCCGGATGAGATTCATGCGAAACGGAGGCGTCGTTGCCGAGCGCCTCCTTCGTCC CGGTGAGGGAACGGTAGTGGAAGGGATCAGCTATACGTTCGGGAAGATAGACTACTGGTGCGACATCGCCGCCACGCGTG ATCCCGGCATTTATCTCATTTACGCCGGCTTTGCCGCCGCCGCCCTGACCCTGGTCCTTTTTGCGTTCTTTCCGACCGCG GAAATCCGGCTTCTGGGGGCAGGGGGGACGGACTCCGTTCATGTCGCTGTCCGGTGCGAGCGGTTCAGGTCGGTGGCCGA GCGGATCCTCGAACAAATCACGGAGGAAAGAACCTGA
Upstream 100 bases:
>100_bases GGCACATTGGCATATCGGCAGGACCGCAACCCGGTGAGGGTAACCTCTCCGGGTTTTCCCGTCGAAAGGAAACCCTGGTT CAATGACGGGTAACGATCTC
Downstream 100 bases:
>100_bases TGGACGTCATTTTTTTCTGGATAGCGACAACACTTTATGCCCTGTCGGCGGTGCTGTACCTGATCCACTTCATCTTCGAC AAAAAGTGGGGCGAGAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MQRLASRRVSLTLILMLLCICVIGALVPQKSTLEPESYAAWVAAGGVHDLWLKLGFTRIFSTWYFLAVMILFFASTLAAT IIRARGLLRREKPEPSAAAMVGEPFSTTVSGVPLEKLKLRVSGFSWHEGLCADGRYLAGTRFGIARWSVVSLHLSLLLLI LGVLASHATYFRGYMKLGVGQSEQLDESGFFQQDRGMFAPALPQGLKITLLSFDNRYREAGYLPDIAADFLLEGAAGGPL RTRLLRSGMVSYGGLDLYLSVRRGFGVILHTVRRDGGRASGYVNFNFPEGGKTPRVQAEIPGSNAQVDVEFLSRNRRYDD LAGIAAPAIRMRFMRNGGVVAERLLRPGEGTVVEGISYTFGKIDYWCDIAATRDPGIYLIYAGFAAAALTLVLFAFFPTA EIRLLGAGGTDSVHVAVRCERFRSVAERILEQITEERT
Sequences:
>Translated_438_residues MQRLASRRVSLTLILMLLCICVIGALVPQKSTLEPESYAAWVAAGGVHDLWLKLGFTRIFSTWYFLAVMILFFASTLAAT IIRARGLLRREKPEPSAAAMVGEPFSTTVSGVPLEKLKLRVSGFSWHEGLCADGRYLAGTRFGIARWSVVSLHLSLLLLI LGVLASHATYFRGYMKLGVGQSEQLDESGFFQQDRGMFAPALPQGLKITLLSFDNRYREAGYLPDIAADFLLEGAAGGPL RTRLLRSGMVSYGGLDLYLSVRRGFGVILHTVRRDGGRASGYVNFNFPEGGKTPRVQAEIPGSNAQVDVEFLSRNRRYDD LAGIAAPAIRMRFMRNGGVVAERLLRPGEGTVVEGISYTFGKIDYWCDIAATRDPGIYLIYAGFAAAALTLVLFAFFPTA EIRLLGAGGTDSVHVAVRCERFRSVAERILEQITEERT >Mature_438_residues MQRLASRRVSLTLILMLLCICVIGALVPQKSTLEPESYAAWVAAGGVHDLWLKLGFTRIFSTWYFLAVMILFFASTLAAT IIRARGLLRREKPEPSAAAMVGEPFSTTVSGVPLEKLKLRVSGFSWHEGLCADGRYLAGTRFGIARWSVVSLHLSLLLLI LGVLASHATYFRGYMKLGVGQSEQLDESGFFQQDRGMFAPALPQGLKITLLSFDNRYREAGYLPDIAADFLLEGAAGGPL RTRLLRSGMVSYGGLDLYLSVRRGFGVILHTVRRDGGRASGYVNFNFPEGGKTPRVQAEIPGSNAQVDVEFLSRNRRYDD LAGIAAPAIRMRFMRNGGVVAERLLRPGEGTVVEGISYTFGKIDYWCDIAATRDPGIYLIYAGFAAAALTLVLFAFFPTA EIRLLGAGGTDSVHVAVRCERFRSVAERILEQITEERT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48093; Mature: 48093
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS00201 FLAVODOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLASRRVSLTLILMLLCICVIGALVPQKSTLEPESYAAWVAAGGVHDLWLKLGFTRIF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH STWYFLAVMILFFASTLAATIIRARGLLRREKPEPSAAAMVGEPFSTTVSGVPLEKLKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHEEE VSGFSWHEGLCADGRYLAGTRFGIARWSVVSLHLSLLLLILGVLASHATYFRGYMKLGVG ECCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QSEQLDESGFFQQDRGMFAPALPQGLKITLLSFDNRYREAGYLPDIAADFLLEGAAGGPL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCHH RTRLLRSGMVSYGGLDLYLSVRRGFGVILHTVRRDGGRASGYVNFNFPEGGKTPRVQAEI HHHHHHHCCHHCCCEEEEEEEHHCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEC PGSNAQVDVEFLSRNRRYDDLAGIAAPAIRMRFMRNGGVVAERLLRPGEGTVVEGISYTF CCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEECCCHHHC GKIDYWCDIAATRDPGIYLIYAGFAAAALTLVLFAFFPTAEIRLLGAGGTDSVHVAVRCE CCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEHH RFRSVAERILEQITEERT HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQRLASRRVSLTLILMLLCICVIGALVPQKSTLEPESYAAWVAAGGVHDLWLKLGFTRIF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH STWYFLAVMILFFASTLAATIIRARGLLRREKPEPSAAAMVGEPFSTTVSGVPLEKLKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHEEE VSGFSWHEGLCADGRYLAGTRFGIARWSVVSLHLSLLLLILGVLASHATYFRGYMKLGVG ECCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QSEQLDESGFFQQDRGMFAPALPQGLKITLLSFDNRYREAGYLPDIAADFLLEGAAGGPL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCHH RTRLLRSGMVSYGGLDLYLSVRRGFGVILHTVRRDGGRASGYVNFNFPEGGKTPRVQAEI HHHHHHHCCHHCCCEEEEEEEHHCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEC PGSNAQVDVEFLSRNRRYDDLAGIAAPAIRMRFMRNGGVVAERLLRPGEGTVVEGISYTF CCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEECCCHHHC GKIDYWCDIAATRDPGIYLIYAGFAAAALTLVLFAFFPTAEIRLLGAGGTDSVHVAVRCE CCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEHH RFRSVAERILEQITEERT HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA