| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221788
Identifier: 78221788
GI number: 78221788
Start: 609941
End: 610810
Strand: Direct
Name: 78221788
Synonym: Gmet_0567
Alternate gene names: NA
Gene position: 609941-610810 (Clockwise)
Preceding gene: 78221787
Following gene: 78221789
Centisome position: 15.26
GC content: 66.9
Gene sequence:
>870_bases ATGGAACTGGCATCCCCCATAACCATCTACTGGGACCTCCCCCCCGACGCCCATGAGCCGTCCCGGCTCATGGGAATCGC CGCCGACATCGTCCCCTGCCGGCCCCTCATGGTATGGATCACCTGCACCGCGCCGACCCTGCCCGACGGGCTCGGAGCGG TGCTGGAGCGGTTCCGGGAGAGCTCCATTTCCGTTATCATCACGATTGCCCTTTCAACCCGGGACGAGTCTGTCCGGGCC CTTGCAGGACAGGGGCTGGTCCGGGAGTTCCTGCTTGCCGTTGACCATGCCGGTCAGCTCGATACCGGGGAATGGAAGGG AATCGCGCCCGTGGGGATATCCTTCGCGGTGACCTCCCGGAACTGGCGCGAGCTCCCCGACCTGATGCACCAGTGCCCGG GCTACGGCATCACCCGCCTCGTGCTCCCCATGCAGCGTCTCTATGGCGACGAGCCTCCCTTCTTCCTCACCTCCCGGGAG CAACAGGAACTGGCGGATGCCCTGGCCTCGGCGGGGGGGACGTCGGGGCTCACGCTCACCATTCACGACCCCTTCCTCTG GCGGGCCTTCAATCCCGGCGTCCCCTTTCCCCAGGGGGGGTGCCAGGCGGCAAACACCATGATCGCCATCGCCCCCGACG GCGGGGTCTATCCGTGCCCTTCCTTGCCGGTGCGCCTCGGCACCGTGGGGGAGGCGTCCCTGAAGGAGATCATCGCATCC ATGGCAAAGAAGGATGTGCGGCAAAGGCTCCTGGAGCATCCCGGCGCCTGCATGGCGTGCGGGGATGTGGCGGAGTGCCG GGGGGGATGCCGCGGAAGGGCATACGTCGTGCATCAATCGCTGGAGGGGGAAGACCCCGCATGCTGGTAA
Upstream 100 bases:
>100_bases CTCCGCCCGGGCCCTGGCCCTCACCGGCGACCTGAACAGCCCCGACCCCCACTGCTGGGCGTAATCCCCGCTCCGCTCCC TGCCGGATCAAGGATGATTC
Downstream 100 bases:
>100_bases GGTATTGCCGGCCACTCACCGTCACAGGAAACCATAGATGATACGTTCAACCTTCAGGCGTTTTCTGCTGTTGTTCCTCC CCCTGCTCCTCCTTGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MELASPITIYWDLPPDAHEPSRLMGIAADIVPCRPLMVWITCTAPTLPDGLGAVLERFRESSISVIITIALSTRDESVRA LAGQGLVREFLLAVDHAGQLDTGEWKGIAPVGISFAVTSRNWRELPDLMHQCPGYGITRLVLPMQRLYGDEPPFFLTSRE QQELADALASAGGTSGLTLTIHDPFLWRAFNPGVPFPQGGCQAANTMIAIAPDGGVYPCPSLPVRLGTVGEASLKEIIAS MAKKDVRQRLLEHPGACMACGDVAECRGGCRGRAYVVHQSLEGEDPACW
Sequences:
>Translated_289_residues MELASPITIYWDLPPDAHEPSRLMGIAADIVPCRPLMVWITCTAPTLPDGLGAVLERFRESSISVIITIALSTRDESVRA LAGQGLVREFLLAVDHAGQLDTGEWKGIAPVGISFAVTSRNWRELPDLMHQCPGYGITRLVLPMQRLYGDEPPFFLTSRE QQELADALASAGGTSGLTLTIHDPFLWRAFNPGVPFPQGGCQAANTMIAIAPDGGVYPCPSLPVRLGTVGEASLKEIIAS MAKKDVRQRLLEHPGACMACGDVAECRGGCRGRAYVVHQSLEGEDPACW >Mature_289_residues MELASPITIYWDLPPDAHEPSRLMGIAADIVPCRPLMVWITCTAPTLPDGLGAVLERFRESSISVIITIALSTRDESVRA LAGQGLVREFLLAVDHAGQLDTGEWKGIAPVGISFAVTSRNWRELPDLMHQCPGYGITRLVLPMQRLYGDEPPFFLTSRE QQELADALASAGGTSGLTLTIHDPFLWRAFNPGVPFPQGGCQAANTMIAIAPDGGVYPCPSLPVRLGTVGEASLKEIIAS MAKKDVRQRLLEHPGACMACGDVAECRGGCRGRAYVVHQSLEGEDPACW
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31131; Mature: 31131
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELASPITIYWDLPPDAHEPSRLMGIAADIVPCRPLMVWITCTAPTLPDGLGAVLERFRE CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHC SSISVIITIALSTRDESVRALAGQGLVREFLLAVDHAGQLDTGEWKGIAPVGISFAVTSR CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC NWRELPDLMHQCPGYGITRLVLPMQRLYGDEPPFFLTSREQQELADALASAGGTSGLTLT CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCCEEEE IHDPFLWRAFNPGVPFPQGGCQAANTMIAIAPDGGVYPCPSLPVRLGTVGEASLKEIIAS EECCEEEEECCCCCCCCCCCCHHHCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHH MAKKDVRQRLLEHPGACMACGDVAECRGGCRGRAYVVHQSLEGEDPACW HHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MELASPITIYWDLPPDAHEPSRLMGIAADIVPCRPLMVWITCTAPTLPDGLGAVLERFRE CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHC SSISVIITIALSTRDESVRALAGQGLVREFLLAVDHAGQLDTGEWKGIAPVGISFAVTSR CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC NWRELPDLMHQCPGYGITRLVLPMQRLYGDEPPFFLTSREQQELADALASAGGTSGLTLT CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCCEEEE IHDPFLWRAFNPGVPFPQGGCQAANTMIAIAPDGGVYPCPSLPVRLGTVGEASLKEIIAS EECCEEEEECCCCCCCCCCCCHHHCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHH MAKKDVRQRLLEHPGACMACGDVAECRGGCRGRAYVVHQSLEGEDPACW HHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA