| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221728
Identifier: 78221728
GI number: 78221728
Start: 549532
End: 549903
Strand: Reverse
Name: 78221728
Synonym: Gmet_0507
Alternate gene names: NA
Gene position: 549903-549532 (Counterclockwise)
Preceding gene: 78221730
Following gene: 78221723
Centisome position: 13.76
GC content: 57.53
Gene sequence:
>372_bases ATGGTTGCGGCCGTCAGCAGAGAGGAAATACACGACAGGACAGCGTCAGGAACTACTACTCAAGGGAGGGATGAATCGAT GGTAACCCACATAGTATTTTTCAAGCTCCACGATCCCACGCCGGCCAACGTGACCGCAACGAGGGAAAAGCTGGAGAGCA TGAGGGGGGAAATCCCCCTGCTTCGCCACCTGGAAGTGGGGGTTGACGTGATCAGGTCCGAGCGATCCTATGATCTGGCC CTCGTGACCAAGTTCGACTCGATGGAAGACCTCCAGGCCTACCAGGTCCACCCCTACCATGCCGGCGAGGTGATCCCCCA CATGAAAGCGGTATCGTCATCGGTGGTAGCGGTCGACTACGAGTCTGCCTGA
Upstream 100 bases:
>100_bases CTTCACCATGACGGCACCTCCTTTGCCTGAGTTAGCTACAACTCTACCATGAAAAATCGGAACCACACGCCCGCGGTGGC AATGGGAGCACTCTTGTGAT
Downstream 100 bases:
>100_bases AAATGCGCTTCGGAACCGCATACGAAAACGCCCCGTCTCCTTTGGTGGAGCGGGGCGTTGTTGTTTCCTAGATCCAGCAG CTGCCGCCTTCGATATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Stress Responsive A/B Barrel Domain Containing Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MVAAVSREEIHDRTASGTTTQGRDESMVTHIVFFKLHDPTPANVTATREKLESMRGEIPLLRHLEVGVDVIRSERSYDLA LVTKFDSMEDLQAYQVHPYHAGEVIPHMKAVSSSVVAVDYESA
Sequences:
>Translated_123_residues MVAAVSREEIHDRTASGTTTQGRDESMVTHIVFFKLHDPTPANVTATREKLESMRGEIPLLRHLEVGVDVIRSERSYDLA LVTKFDSMEDLQAYQVHPYHAGEVIPHMKAVSSSVVAVDYESA >Mature_123_residues MVAAVSREEIHDRTASGTTTQGRDESMVTHIVFFKLHDPTPANVTATREKLESMRGEIPLLRHLEVGVDVIRSERSYDLA LVTKFDSMEDLQAYQVHPYHAGEVIPHMKAVSSSVVAVDYESA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13709; Mature: 13709
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAAVSREEIHDRTASGTTTQGRDESMVTHIVFFKLHDPTPANVTATREKLESMRGEIPL CCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCH LRHLEVGVDVIRSERSYDLALVTKFDSMEDLQAYQVHPYHAGEVIPHMKAVSSSVVAVDY HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHEEECCCCCCCHHHHHHHHCCCEEEEEE ESA CCC >Mature Secondary Structure MVAAVSREEIHDRTASGTTTQGRDESMVTHIVFFKLHDPTPANVTATREKLESMRGEIPL CCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCH LRHLEVGVDVIRSERSYDLALVTKFDSMEDLQAYQVHPYHAGEVIPHMKAVSSSVVAVDY HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHEEECCCCCCCHHHHHHHHCCCEEEEEE ESA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA