| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is flgG [H]
Identifier: 78221651
GI number: 78221651
Start: 477137
End: 477865
Strand: Direct
Name: flgG [H]
Synonym: Gmet_0430
Alternate gene names: 78221651
Gene position: 477137-477865 (Clockwise)
Preceding gene: 78221650
Following gene: 78221652
Centisome position: 11.94
GC content: 63.92
Gene sequence:
>729_bases ATGAACAGCGGTATCTATTCGGCACTCACGGGGAACGTCGCGGCCATGAAACGGCTCGATGTGCTGTCCAACAACCTGGC CAACGTCAACACCCCTGGTTTCAAGAAGGACCGGATGACCTTCGAGAGCATGCTCCAGACGGTGGGAGCCCAGCCCCGTC CCGGCGGCGGCACCGATGCACCGGTATTCGCGGAGACCACCTTCTTCACCGACTACTCCCCCGGCTCCGTGAAGCAGACC GGCAACCCCTTCGATCTGGCCATAGACGGTGACGGCTTCTTCGCCGTCACTACAGCCGACGGGCAGCGGGCCTACACCCG GCAGGGGAATTTCCGCCTCGATTCGACCGGCCGGCTCGTGACCGCTGACGGCGCCCAGGTGGCCGGCGGCGTCGTTATTG CTGGGGGAAAGGTGGACATCAACGGCAAGGGGGAGGTCTTGGTGGACGGGAGCCAGGTGGGGCGGCTGGAGGTGGTCGAT TTTCCCAAGCCCTATGCCCTCCAGAAGCTCGGCGGCGGGCTCTTCGTGCCGGCCGACCCCCAGGCCACGCCCAATCCGGT GACCGGTGAGAAGGTGATGCAGGGGGCCATCGAGGAGTCCAACGTGAACACCGTCCAGGAGATGGTGCAGCTCATCGAGA CGAACCGCTACTTCGAGATGTGCTCCAAGGTGGTCAAGGCCTACGACGACCTGACCGGCAAGGCGGCTAACGAAATCGGG AAGATCTAG
Upstream 100 bases:
>100_bases ATCGGCGCGGTGCTTGATCTCTCCGAGTCGCGCATCTCCCAGCTCCACAGCCAGGCCATCGTCCGTCTGCGGGCGAAGAT GAAGAACATGAGGTGAATCC
Downstream 100 bases:
>100_bases GGACCCGGGACCGGGGACCGGTAATTCGTAGGGGCGGACTGCGTCCGCCCAGGGCGCACGGAAACAATACAAGGAGAAAA ACATGATCAGAGCACTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MNSGIYSALTGNVAAMKRLDVLSNNLANVNTPGFKKDRMTFESMLQTVGAQPRPGGGTDAPVFAETTFFTDYSPGSVKQT GNPFDLAIDGDGFFAVTTADGQRAYTRQGNFRLDSTGRLVTADGAQVAGGVVIAGGKVDINGKGEVLVDGSQVGRLEVVD FPKPYALQKLGGGLFVPADPQATPNPVTGEKVMQGAIEESNVNTVQEMVQLIETNRYFEMCSKVVKAYDDLTGKAANEIG KI
Sequences:
>Translated_242_residues MNSGIYSALTGNVAAMKRLDVLSNNLANVNTPGFKKDRMTFESMLQTVGAQPRPGGGTDAPVFAETTFFTDYSPGSVKQT GNPFDLAIDGDGFFAVTTADGQRAYTRQGNFRLDSTGRLVTADGAQVAGGVVIAGGKVDINGKGEVLVDGSQVGRLEVVD FPKPYALQKLGGGLFVPADPQATPNPVTGEKVMQGAIEESNVNTVQEMVQLIETNRYFEMCSKVVKAYDDLTGKAANEIG KI >Mature_242_residues MNSGIYSALTGNVAAMKRLDVLSNNLANVNTPGFKKDRMTFESMLQTVGAQPRPGGGTDAPVFAETTFFTDYSPGSVKQT GNPFDLAIDGDGFFAVTTADGQRAYTRQGNFRLDSTGRLVTADGAQVAGGVVIAGGKVDINGKGEVLVDGSQVGRLEVVD FPKPYALQKLGGGLFVPADPQATPNPVTGEKVMQGAIEESNVNTVQEMVQLIETNRYFEMCSKVVKAYDDLTGKAANEIG KI
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=37.3076923076923, Blast_Score=131, Evalue=3e-32, Organism=Escherichia coli, GI1787317, Length=255, Percent_Identity=33.7254901960784, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1787316, Length=122, Percent_Identity=34.4262295081967, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 25567; Mature: 25567
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSGIYSALTGNVAAMKRLDVLSNNLANVNTPGFKKDRMTFESMLQTVGAQPRPGGGTDA CCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC PVFAETTFFTDYSPGSVKQTGNPFDLAIDGDGFFAVTTADGQRAYTRQGNFRLDSTGRLV CEEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCEEECCCCCEE TADGAQVAGGVVIAGGKVDINGKGEVLVDGSQVGRLEVVDFPKPYALQKLGGGLFVPADP EECCCCCCCCEEEECCEEEECCCCCEEECCCCCCEEEEEECCCCHHHHHCCCCEEECCCC QATPNPVTGEKVMQGAIEESNVNTVQEMVQLIETNRYFEMCSKVVKAYDDLTGKAANEIG CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHC KI CC >Mature Secondary Structure MNSGIYSALTGNVAAMKRLDVLSNNLANVNTPGFKKDRMTFESMLQTVGAQPRPGGGTDA CCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC PVFAETTFFTDYSPGSVKQTGNPFDLAIDGDGFFAVTTADGQRAYTRQGNFRLDSTGRLV CEEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCEEECCCCCEE TADGAQVAGGVVIAGGKVDINGKGEVLVDGSQVGRLEVVDFPKPYALQKLGGGLFVPADP EECCCCCCCCEEEECCEEEECCCCCEEECCCCCCEEEEEECCCCHHHHHCCCCEEECCCC QATPNPVTGEKVMQGAIEESNVNTVQEMVQLIETNRYFEMCSKVVKAYDDLTGKAANEIG CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHC KI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]