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The map label for this gene is 78221644

Identifier: 78221644

GI number: 78221644

Start: 470123

End: 471004

Strand: Direct

Name: 78221644

Synonym: Gmet_0423

Alternate gene names: NA

Gene position: 470123-471004 (Clockwise)

Preceding gene: 78221639

Following gene: 78221645

Centisome position: 11.76

GC content: 63.72

Gene sequence:

>882_bases
ATGCCTACCTACATCGAACCCGTCTTCCGCCCACCCAGCGAGGCCCGCAGCCTGATCTTCCAGATCACCATCGGCTGCTC
CCAGAACCACTGCGCCTACTGCGGCATGTACAAGATGAAGCGCTTTGCTCTGAAGCCGGTGGAGGAGGTTTTCGCCGAGA
TCGACGGCATCCCGGGCCGGTACCGTCTCCATGTGGATAGGGTCTTTTTGGCCGACGGCGATGCCCTGGTTTACCCCTTC
GAGGGGCTCTGCGCCATCCTCGACCGGCTCGCCGCCACGTTCCCGAACCTCACGCGGGTCGGCTCCTACGCCTCGCCCAA
CAGTCTCACCACCAAGAGTGTGGATGAGTTGCGGATGCTACGGGAGAAGCGGTTGCGGATCGTCTACTTCGGGCTGGAGT
CGGGGGATGACGCGACGCTTGCGGCGGTGAACAAGGGATTTACGGCGGAGAAGATGGCGCAGGAGGCCCTAAAGGCCCGG
GAAGCGGGGATGAAGCTGTCGGTTACTGCCATCCTGGGGGTGGCGGGCCGGGGGCGGAGTCTCGATCATGCGCGGGGCAC
GGCCGCCTGGGTGAACCGGGTGAATCCCGAGTTCTTCTCGCTCCTCACCCTTTTCCGCCGCCACAACGAGGAGTTCGTCG
ACACCCTGGACCAGTGCACCCGCCGGGAGCTGCTGGCCGAGGCGAAGGAGCTGCTGGCGCACCTCTCCCCCCAGCGAACC
ATTCTCCGTTCCAACCACGTCTCCAATTTCCTGGAGCTGGCCGGGAGCTATCCCAAGGACCGGGAGCGGCTCATCGCTTC
CGTTGAGGAAGCGGTTGCCCATCTTGAGGGGATTCCGGGATATCTGGACGAGGTGCCGGAGTATGGGGAGGAGTATTACT
GA

Upstream 100 bases:

>100_bases
GCTCAGTAAGTGCTGGACAGTTGACTTTCACCCCCTGTTGAGTGAATAAAGTGGAGAACAATTGACTCTGCACTAAAACT
AATGGTTAAGGAACCTCCCC

Downstream 100 bases:

>100_bases
GGCAAGGGGTCAGGCGATTCTTATTCTTGCGATACCTATCGGCTTCGGTATAATCACAGCGTTCCAACATCCATAGGTAG
TGGGATTTCTTTATGGCGAT

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Fe-S Oxidoreductase; Oxygen-Independent Coproporphyrinogen III Oxidase; Radical SAM Family Protein; Radical Sam Domain Protein; Coproporphyrinogen Oxidase; Elongator /MiaB/NifB; Radical SAM Superfamily Lipoprotein; Oxygen-Independent Coproporphyrinogen III; Radical SAM; Fe-S Oxidoreductase Family Protein

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPTYIEPVFRPPSEARSLIFQITIGCSQNHCAYCGMYKMKRFALKPVEEVFAEIDGIPGRYRLHVDRVFLADGDALVYPF
EGLCAILDRLAATFPNLTRVGSYASPNSLTTKSVDELRMLREKRLRIVYFGLESGDDATLAAVNKGFTAEKMAQEALKAR
EAGMKLSVTAILGVAGRGRSLDHARGTAAWVNRVNPEFFSLLTLFRRHNEEFVDTLDQCTRRELLAEAKELLAHLSPQRT
ILRSNHVSNFLELAGSYPKDRERLIASVEEAVAHLEGIPGYLDEVPEYGEEYY

Sequences:

>Translated_293_residues
MPTYIEPVFRPPSEARSLIFQITIGCSQNHCAYCGMYKMKRFALKPVEEVFAEIDGIPGRYRLHVDRVFLADGDALVYPF
EGLCAILDRLAATFPNLTRVGSYASPNSLTTKSVDELRMLREKRLRIVYFGLESGDDATLAAVNKGFTAEKMAQEALKAR
EAGMKLSVTAILGVAGRGRSLDHARGTAAWVNRVNPEFFSLLTLFRRHNEEFVDTLDQCTRRELLAEAKELLAHLSPQRT
ILRSNHVSNFLELAGSYPKDRERLIASVEEAVAHLEGIPGYLDEVPEYGEEYY
>Mature_292_residues
PTYIEPVFRPPSEARSLIFQITIGCSQNHCAYCGMYKMKRFALKPVEEVFAEIDGIPGRYRLHVDRVFLADGDALVYPFE
GLCAILDRLAATFPNLTRVGSYASPNSLTTKSVDELRMLREKRLRIVYFGLESGDDATLAAVNKGFTAEKMAQEALKARE
AGMKLSVTAILGVAGRGRSLDHARGTAAWVNRVNPEFFSLLTLFRRHNEEFVDTLDQCTRRELLAEAKELLAHLSPQRTI
LRSNHVSNFLELAGSYPKDRERLIASVEEAVAHLEGIPGYLDEVPEYGEEYY

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32924; Mature: 32793

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYIEPVFRPPSEARSLIFQITIGCSQNHCAYCGMYKMKRFALKPVEEVFAEIDGIPGR
CCCCCCCCCCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCE
YRLHVDRVFLADGDALVYPFEGLCAILDRLAATFPNLTRVGSYASPNSLTTKSVDELRML
EEEEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHH
REKRLRIVYFGLESGDDATLAAVNKGFTAEKMAQEALKAREAGMKLSVTAILGVAGRGRS
HHCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCC
LDHARGTAAWVNRVNPEFFSLLTLFRRHNEEFVDTLDQCTRRELLAEAKELLAHLSPQRT
CCHHCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ILRSNHVSNFLELAGSYPKDRERLIASVEEAVAHLEGIPGYLDEVPEYGEEYY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
PTYIEPVFRPPSEARSLIFQITIGCSQNHCAYCGMYKMKRFALKPVEEVFAEIDGIPGR
CCCCCCCCCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCE
YRLHVDRVFLADGDALVYPFEGLCAILDRLAATFPNLTRVGSYASPNSLTTKSVDELRML
EEEEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHH
REKRLRIVYFGLESGDDATLAAVNKGFTAEKMAQEALKAREAGMKLSVTAILGVAGRGRS
HHCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCC
LDHARGTAAWVNRVNPEFFSLLTLFRRHNEEFVDTLDQCTRRELLAEAKELLAHLSPQRT
CCHHCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ILRSNHVSNFLELAGSYPKDRERLIASVEEAVAHLEGIPGYLDEVPEYGEEYY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA