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The map label for this gene is 78221639

Identifier: 78221639

GI number: 78221639

Start: 463602

End: 465275

Strand: Direct

Name: 78221639

Synonym: Gmet_0418

Alternate gene names: NA

Gene position: 463602-465275 (Clockwise)

Preceding gene: 78221638

Following gene: 78221644

Centisome position: 11.6

GC content: 64.4

Gene sequence:

>1674_bases
ATGTCGTGGAAAATCATTGAAAAATACCGCCGTATCCTTGCCCAGGAAGAGGGGAATTCACCCAAGCGGCGTGGCGGGAA
ACTGACCGTCTGCCTCGTCTATCCCAACCGCTATGGCGTGGCCATGAGCAACCTCGGCTTCCAGGCGGTCCATGCGCTGC
TGAACGCCGAGTCCGACATCCTCTGTGAACGGGCTTTCCTCCCCGACCCGGACGATCTGCGGGAATACCGCCGCAGCGGC
GCCCGGCTCCTCTCCCTGGAGTCCCAGGAACCACTTTCCTCCTTCGATATTATTGCTTTTTCGGTTTCTTTCGAGAGCGA
CTACCTGAACATCCCCGTCATCTTCGACCTGGCCGGGATCCCGGCCCTGGCGGCTGAACGGACAGGGTCCCATCCCCTCG
TCATGGGGGGCGGGGCGGCCCTCTTTCTGAATCCGGAGCCGGTGGCTGATTTCCTGGATCTCATTGTCGTGGGGGAGGGG
GAGGCGATTCTGCCGACGTTTCTGGACCACATTCGCGCCGACGGGATTGGGGACCGCGCAATGTTTCTTGCAGGAGTCGC
GGGGCTTCCCGGTATCTACGTGCCGTCTCTCTACGCGACGGAGTATGACGGCGCCCGCCTGGTGTCGCGGGAGGCGAAGG
ACGGGGCGCCGGAGCAGGTGAAGCGTATCTGGATGGCCGAGCCCGACGGGCGGGCCACGGTGTCCGAGATTTTGACGCCC
GGCACCGAGTTCTCCGACATGTATCTGGTTGAGGTCTCCCGGGGGTGCGGGCGGGGGTGCCGCTTCTGTGCCGCCGGCTT
CATCTACCATCCCTACCGGCAGCGCTCCCTCGACGCGGTGAAGGCCGCCGTTGCCGAAGGACTCAGCCACCGGCGCAAGA
TCGGGCTCGTGGGGGCGGCGGTCTCGGATTTTCGGGAGATCGGTGAACTCTGCCGGCACATCCTGGCGGAGGGGGGAACG
GTGTCGGTGTCGTCGCTGCGAATCGACCGCCTCGACGAGGGGATGATCGAGGTGCTCAAGGCGAGCGGCCACAAGACCGT
GGCCCTGGCCCCCGAGGGGGGGAGCCAGCGGATACGGGACCTCATCAACAAGAACCTGACCGAGGAGCAGATTCTGGCCG
CCTGCGATCTCCTCATCGGCCATGATATCCTGAACCTGAAGCTCTACTTCATCATCGGCCTCCCCACCGAGACCATGGAC
GATCTGGAGGAGATGGCCCTCCTCGTGGAGAAGATCCGCAAGCGGGTCATTGCCGCGGCGCGGAAAAACAAGCGGCTCGG
TGAGATCATCCTCTCCGTGAACCCCTTTGTCCCCAAGCCGTTCACACCGTTCCAGTGGTGCGGCATGGAAGATACCCCCT
CCCTGGAGAAAAAGCTCAAGTACCTCCAGCAGACGGTGGGGAGGCTGTCAAACGTCCGGCTCATTGCCGAGAGCCCCAAG
GATGCCTGGCTCCAGGCCCTCCTCTCCCGAGGGGACCGGCGGCTCTCGGGGTTCCTCCTCCGCGCCGCGGAACTGGGGAA
CTGGAAGCGGGCGGCCCGGGAATTTCCCGTCGACACCGACTTCCTGGTCCACCGGACCATCCCCCTCGACGAGATGCTGC
CGTGGGATGTCATAGCCAGCGCCGACGCCGAGCGGCTCAGGCGGGAGTATCTGAAGGCGACCCCTCCCCGGTGA

Upstream 100 bases:

>100_bases
CTTTCAATTTCAATTTCCCGGCTCCCCACTTACCCCCTCCAGGGGGGCCGGGCCTTTTTTCTCCTTTCTGAAACCTCCTT
CCCCGTGGTACCTTTTGACA

Downstream 100 bases:

>100_bases
GACCGCTATCGTCTTCCGATTCTCTCCAGCCAAGGGAGATGGAGATCGCCGGGCGATGAATGGCGGCGTTCCTCCTGGCG
GGTCTTTTGTCCCGAGCTGA

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MSWKIIEKYRRILAQEEGNSPKRRGGKLTVCLVYPNRYGVAMSNLGFQAVHALLNAESDILCERAFLPDPDDLREYRRSG
ARLLSLESQEPLSSFDIIAFSVSFESDYLNIPVIFDLAGIPALAAERTGSHPLVMGGGAALFLNPEPVADFLDLIVVGEG
EAILPTFLDHIRADGIGDRAMFLAGVAGLPGIYVPSLYATEYDGARLVSREAKDGAPEQVKRIWMAEPDGRATVSEILTP
GTEFSDMYLVEVSRGCGRGCRFCAAGFIYHPYRQRSLDAVKAAVAEGLSHRRKIGLVGAAVSDFREIGELCRHILAEGGT
VSVSSLRIDRLDEGMIEVLKASGHKTVALAPEGGSQRIRDLINKNLTEEQILAACDLLIGHDILNLKLYFIIGLPTETMD
DLEEMALLVEKIRKRVIAAARKNKRLGEIILSVNPFVPKPFTPFQWCGMEDTPSLEKKLKYLQQTVGRLSNVRLIAESPK
DAWLQALLSRGDRRLSGFLLRAAELGNWKRAAREFPVDTDFLVHRTIPLDEMLPWDVIASADAERLRREYLKATPPR

Sequences:

>Translated_557_residues
MSWKIIEKYRRILAQEEGNSPKRRGGKLTVCLVYPNRYGVAMSNLGFQAVHALLNAESDILCERAFLPDPDDLREYRRSG
ARLLSLESQEPLSSFDIIAFSVSFESDYLNIPVIFDLAGIPALAAERTGSHPLVMGGGAALFLNPEPVADFLDLIVVGEG
EAILPTFLDHIRADGIGDRAMFLAGVAGLPGIYVPSLYATEYDGARLVSREAKDGAPEQVKRIWMAEPDGRATVSEILTP
GTEFSDMYLVEVSRGCGRGCRFCAAGFIYHPYRQRSLDAVKAAVAEGLSHRRKIGLVGAAVSDFREIGELCRHILAEGGT
VSVSSLRIDRLDEGMIEVLKASGHKTVALAPEGGSQRIRDLINKNLTEEQILAACDLLIGHDILNLKLYFIIGLPTETMD
DLEEMALLVEKIRKRVIAAARKNKRLGEIILSVNPFVPKPFTPFQWCGMEDTPSLEKKLKYLQQTVGRLSNVRLIAESPK
DAWLQALLSRGDRRLSGFLLRAAELGNWKRAAREFPVDTDFLVHRTIPLDEMLPWDVIASADAERLRREYLKATPPR
>Mature_556_residues
SWKIIEKYRRILAQEEGNSPKRRGGKLTVCLVYPNRYGVAMSNLGFQAVHALLNAESDILCERAFLPDPDDLREYRRSGA
RLLSLESQEPLSSFDIIAFSVSFESDYLNIPVIFDLAGIPALAAERTGSHPLVMGGGAALFLNPEPVADFLDLIVVGEGE
AILPTFLDHIRADGIGDRAMFLAGVAGLPGIYVPSLYATEYDGARLVSREAKDGAPEQVKRIWMAEPDGRATVSEILTPG
TEFSDMYLVEVSRGCGRGCRFCAAGFIYHPYRQRSLDAVKAAVAEGLSHRRKIGLVGAAVSDFREIGELCRHILAEGGTV
SVSSLRIDRLDEGMIEVLKASGHKTVALAPEGGSQRIRDLINKNLTEEQILAACDLLIGHDILNLKLYFIIGLPTETMDD
LEEMALLVEKIRKRVIAAARKNKRLGEIILSVNPFVPKPFTPFQWCGMEDTPSLEKKLKYLQQTVGRLSNVRLIAESPKD
AWLQALLSRGDRRLSGFLLRAAELGNWKRAAREFPVDTDFLVHRTIPLDEMLPWDVIASADAERLRREYLKATPPR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 61695; Mature: 61564

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWKIIEKYRRILAQEEGNSPKRRGGKLTVCLVYPNRYGVAMSNLGFQAVHALLNAESDI
CCCHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCCHHHCCCHHHHHHHHCCCHHH
LCERAFLPDPDDLREYRRSGARLLSLESQEPLSSFDIIAFSVSFESDYLNIPVIFDLAGI
HHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCC
PALAAERTGSHPLVMGGGAALFLNPEPVADFLDLIVVGEGEAILPTFLDHIRADGIGDRA
CHHHHHCCCCCCEEEECCEEEEECCCCHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCHH
MFLAGVAGLPGIYVPSLYATEYDGARLVSREAKDGAPEQVKRIWMAEPDGRATVSEILTP
HHHHHHCCCCCCCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCC
GTEFSDMYLVEVSRGCGRGCRFCAAGFIYHPYRQRSLDAVKAAVAEGLSHRRKIGLVGAA
CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSDFREIGELCRHILAEGGTVSVSSLRIDRLDEGMIEVLKASGHKTVALAPEGGSQRIRD
HHHHHHHHHHHHHHHCCCCEEEEHEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
LINKNLTEEQILAACDLLIGHDILNLKLYFIIGLPTETMDDLEEMALLVEKIRKRVIAAA
HHHCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
RKNKRLGEIILSVNPFVPKPFTPFQWCGMEDTPSLEKKLKYLQQTVGRLSNVRLIAESPK
HHCCCHHHEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCH
DAWLQALLSRGDRRLSGFLLRAAELGNWKRAAREFPVDTDFLVHRTIPLDEMLPWDVIAS
HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCHHHCCCHHHHHC
ADAERLRREYLKATPPR
CCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SWKIIEKYRRILAQEEGNSPKRRGGKLTVCLVYPNRYGVAMSNLGFQAVHALLNAESDI
CCHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCCHHHCCCHHHHHHHHCCCHHH
LCERAFLPDPDDLREYRRSGARLLSLESQEPLSSFDIIAFSVSFESDYLNIPVIFDLAGI
HHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCC
PALAAERTGSHPLVMGGGAALFLNPEPVADFLDLIVVGEGEAILPTFLDHIRADGIGDRA
CHHHHHCCCCCCEEEECCEEEEECCCCHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCHH
MFLAGVAGLPGIYVPSLYATEYDGARLVSREAKDGAPEQVKRIWMAEPDGRATVSEILTP
HHHHHHCCCCCCCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCC
GTEFSDMYLVEVSRGCGRGCRFCAAGFIYHPYRQRSLDAVKAAVAEGLSHRRKIGLVGAA
CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSDFREIGELCRHILAEGGTVSVSSLRIDRLDEGMIEVLKASGHKTVALAPEGGSQRIRD
HHHHHHHHHHHHHHHCCCCEEEEHEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
LINKNLTEEQILAACDLLIGHDILNLKLYFIIGLPTETMDDLEEMALLVEKIRKRVIAAA
HHHCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
RKNKRLGEIILSVNPFVPKPFTPFQWCGMEDTPSLEKKLKYLQQTVGRLSNVRLIAESPK
HHCCCHHHEEEECCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCH
DAWLQALLSRGDRRLSGFLLRAAELGNWKRAAREFPVDTDFLVHRTIPLDEMLPWDVIAS
HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCHHHCCCHHHHHC
ADAERLRREYLKATPPR
CCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]