Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78221621

Identifier: 78221621

GI number: 78221621

Start: 442976

End: 443689

Strand: Direct

Name: 78221621

Synonym: Gmet_0400

Alternate gene names: NA

Gene position: 442976-443689 (Clockwise)

Preceding gene: 78221620

Following gene: 78221622

Centisome position: 11.08

GC content: 61.62

Gene sequence:

>714_bases
GTGCGCAAGAATCTGTTTATGCTTGAGGAGTTGCAGGAGCTCGACTTGAAAATCGACGGCCGTCAGGGAGGGCGGCAGAC
GCTGCTCGATCAGATGGTGGAGCTGGATCAGCAGGTGGAAGAGACCCGGCTTGCGGTCGATGCGAAGCGGGGCGAGCTGG
CGCTTCTCGAAGAGGAGAAGGAGGGGCTTGAGGCGAATCTGGTCACGGAGGACGAGAATATCGCCCGTTCCGAGGTCCGC
CAGAAGGAGATCAAGACCCAGAAGGAGTACCAGGCGGTGGTCAAGGAGATCACGGCTGCGCGCAAGCTTAAGGCTGAACT
GGAGGAGCAGATCCTTCAGAAATCGGCCCAGGCCGAGGAGCTCACTGCCGATATCGCTGCCCGTGAAGCCGACCTGGCCT
CTCTTGAGGAAAATATGGCGAGCCGCAAAGCGGAGATCCAGGAGGGGCTTGACCGGATCGACCGGGAGCTCGCCGCCGAT
GCGGCTGCCAAGGAGACAACGGTAAAGGCGATCCCCGCCTCCCTCGTCAAGCGTTACCTGGCCCTACGTGAGCGGCGCCA
GGGGATTGCCATCGTGGAGGCGCGTGCAGGCAACTGCTCCGGGTGCAACATGAATCTCCCGCCGCAGCTCTACAATAGCC
TCTTCCGGGGGGATGACCTGGTGCTCTGTCCCCACTGCCAGCGGATGCTGTTTCTGCGTCAGGACGCTCAATAG

Upstream 100 bases:

>100_bases
GAGGTTATTCCCTTCAGGGTGGAGCGTGATCCGTTCACGTGGCGATAACGGTATCGCTCTGACTGTGAAGGTAACATACT
GGATTAAGGGAGGTTGATTG

Downstream 100 bases:

>100_bases
TCCTGGCTGAGTTCAAGGTTTGGCCGAAGCAGAACAGATGACCGCTCTCCGTTCGCGGAGGGAGGAAAGTCCGGGCTCCA
CAGGGCATGGTGCTGGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEKEGLEANLVTEDENIARSEVR
QKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEELTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAAD
AAAKETTVKAIPASLVKRYLALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ

Sequences:

>Translated_237_residues
MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEKEGLEANLVTEDENIARSEVR
QKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEELTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAAD
AAAKETTVKAIPASLVKRYLALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ
>Mature_237_residues
MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEKEGLEANLVTEDENIARSEVR
QKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEELTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAAD
AAAKETTVKAIPASLVKRYLALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ

Specific function: Unknown

COG id: COG1579

COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26761; Mature: 26761

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEK
CCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHH
EGLEANLVTEDENIARSEVRQKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEE
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAADAAAKETTVKAIPASLVKRYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ
HHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEK
CCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHH
EGLEANLVTEDENIARSEVRQKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEE
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAADAAAKETTVKAIPASLVKRYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ
HHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA