| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221621
Identifier: 78221621
GI number: 78221621
Start: 442976
End: 443689
Strand: Direct
Name: 78221621
Synonym: Gmet_0400
Alternate gene names: NA
Gene position: 442976-443689 (Clockwise)
Preceding gene: 78221620
Following gene: 78221622
Centisome position: 11.08
GC content: 61.62
Gene sequence:
>714_bases GTGCGCAAGAATCTGTTTATGCTTGAGGAGTTGCAGGAGCTCGACTTGAAAATCGACGGCCGTCAGGGAGGGCGGCAGAC GCTGCTCGATCAGATGGTGGAGCTGGATCAGCAGGTGGAAGAGACCCGGCTTGCGGTCGATGCGAAGCGGGGCGAGCTGG CGCTTCTCGAAGAGGAGAAGGAGGGGCTTGAGGCGAATCTGGTCACGGAGGACGAGAATATCGCCCGTTCCGAGGTCCGC CAGAAGGAGATCAAGACCCAGAAGGAGTACCAGGCGGTGGTCAAGGAGATCACGGCTGCGCGCAAGCTTAAGGCTGAACT GGAGGAGCAGATCCTTCAGAAATCGGCCCAGGCCGAGGAGCTCACTGCCGATATCGCTGCCCGTGAAGCCGACCTGGCCT CTCTTGAGGAAAATATGGCGAGCCGCAAAGCGGAGATCCAGGAGGGGCTTGACCGGATCGACCGGGAGCTCGCCGCCGAT GCGGCTGCCAAGGAGACAACGGTAAAGGCGATCCCCGCCTCCCTCGTCAAGCGTTACCTGGCCCTACGTGAGCGGCGCCA GGGGATTGCCATCGTGGAGGCGCGTGCAGGCAACTGCTCCGGGTGCAACATGAATCTCCCGCCGCAGCTCTACAATAGCC TCTTCCGGGGGGATGACCTGGTGCTCTGTCCCCACTGCCAGCGGATGCTGTTTCTGCGTCAGGACGCTCAATAG
Upstream 100 bases:
>100_bases GAGGTTATTCCCTTCAGGGTGGAGCGTGATCCGTTCACGTGGCGATAACGGTATCGCTCTGACTGTGAAGGTAACATACT GGATTAAGGGAGGTTGATTG
Downstream 100 bases:
>100_bases TCCTGGCTGAGTTCAAGGTTTGGCCGAAGCAGAACAGATGACCGCTCTCCGTTCGCGGAGGGAGGAAAGTCCGGGCTCCA CAGGGCATGGTGCTGGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEKEGLEANLVTEDENIARSEVR QKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEELTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAAD AAAKETTVKAIPASLVKRYLALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ
Sequences:
>Translated_237_residues MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEKEGLEANLVTEDENIARSEVR QKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEELTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAAD AAAKETTVKAIPASLVKRYLALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ >Mature_237_residues MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEKEGLEANLVTEDENIARSEVR QKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEELTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAAD AAAKETTVKAIPASLVKRYLALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26761; Mature: 26761
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEK CCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHH EGLEANLVTEDENIARSEVRQKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEE CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAADAAAKETTVKAIPASLVKRYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ HHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHCCC >Mature Secondary Structure MRKNLFMLEELQELDLKIDGRQGGRQTLLDQMVELDQQVEETRLAVDAKRGELALLEEEK CCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHH EGLEANLVTEDENIARSEVRQKEIKTQKEYQAVVKEITAARKLKAELEEQILQKSAQAEE CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTADIAAREADLASLEENMASRKAEIQEGLDRIDRELAADAAAKETTVKAIPASLVKRYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRERRQGIAIVEARAGNCSGCNMNLPPQLYNSLFRGDDLVLCPHCQRMLFLRQDAQ HHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA