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The map label for this gene is yqfO [H]

Identifier: 78221620

GI number: 78221620

Start: 441805

End: 442923

Strand: Direct

Name: yqfO [H]

Synonym: Gmet_0399

Alternate gene names: 78221620

Gene position: 441805-442923 (Clockwise)

Preceding gene: 78221619

Following gene: 78221621

Centisome position: 11.05

GC content: 61.13

Gene sequence:

>1119_bases
ATGATTACGCCAAAAGTCTCGGACATAGTTGGAATTGTTAATAAAATAGCTCCGCATGGCCTCGCTGAAGAGTGGGACAA
CGTGGGGCTCATGGTGGGGGATCCGTCGGCGCCCGCTACCCGGATCATGGTGGCCCTCGACGGCACTCCGGACACAATCG
ATGCGGCAATCGCCGACCGATGTCAGATTCTCCTCACTCATCACCCCTTCATTTTTCGTCCCCTCAAGCATATCTCCTCC
GCAGACCCCACCGGACGTCTCGTTCTGAAAGCCGCAAGCCACGCCCTGGCAGTTATCTCTCTCCACACCAACTTCGACAT
CGCCTCTGGCGGGATGAATGATCTCCTGGCTGAGCGCCTCGGCGTCAGCAACTGCCGGCCGTTAAAAGTGACGACCTCTG
AAAGTCTCGTGAAGCTTGTCGTGTTTGTGCCAACAGGGCACGAGGAACGGGTGCGGGATGCTCTCTTTCGCTTCAGTGGC
GTCGTCGGCGCCTACAGTGACTGTTCCTTTCAGTGTGCCGGTACCGGCACCTTCAAGCCTCTGGCGGGCGCGCAACCGTT
CATCGGCCAGGTGGGAAGGCGTGAATATGTGGAGGAGTCGCGAATCGAGGTGCTTCTTGAGAAGCGGAACCTTCCGGCAG
CCGTGACCGCCCTGGTTAAGGCGCATCCCTACGAGGAGCCCGCTTTTGATCTCTTCCCGCTCCTGAACCGGGGGCCCGAG
CAGGGACTAGGCAGAATTGGCGTCCTTGCGGAGGAGACTACGGTCAGTGCCTTCGCCGACGAAGTCAAAGAGCGCCTCGG
CCTTGCCGGCGTGCGGTTTGTCGGAGATGGCGCCCGTCCGGTCAGGAAGGTGGCACTCTGCGGCGGGAGCGGCATGTCGC
TGCTGCGTGACGCCCAGCGACAGGGCGCGGATGTGCTGGTGACGGGTGATGTGAAGTACCACGAGGGCCGCGATGCCGAA
GCCCTTGGCGTGGCCCTTGTCGACGGGGGACACTTCGGCACGGAGGTACTCATGGTGGAGAGTGTAGCGAATCGGATGGC
GGCGGAACTCGCGTCGCGCCGTTTCGAGGCAGAGGTTATTCCCTTCAGGGTGGAGCGTGATCCGTTCACGTGGCGATAA

Upstream 100 bases:

>100_bases
AGCAGGGGATGCCCCGAAATCACCGGTCAACAACGACCACTCATACGGTTTCAAAAAAGAGTGCGGCCCGAAGGGTGGCA
CTCTTTTTCTTTCGCCACGA

Downstream 100 bases:

>100_bases
CGGTATCGCTCTGACTGTGAAGGTAACATACTGGATTAAGGGAGGTTGATTGGTGCGCAAGAATCTGTTTATGCTTGAGG
AGTTGCAGGAGCTCGACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MITPKVSDIVGIVNKIAPHGLAEEWDNVGLMVGDPSAPATRIMVALDGTPDTIDAAIADRCQILLTHHPFIFRPLKHISS
ADPTGRLVLKAASHALAVISLHTNFDIASGGMNDLLAERLGVSNCRPLKVTTSESLVKLVVFVPTGHEERVRDALFRFSG
VVGAYSDCSFQCAGTGTFKPLAGAQPFIGQVGRREYVEESRIEVLLEKRNLPAAVTALVKAHPYEEPAFDLFPLLNRGPE
QGLGRIGVLAEETTVSAFADEVKERLGLAGVRFVGDGARPVRKVALCGGSGMSLLRDAQRQGADVLVTGDVKYHEGRDAE
ALGVALVDGGHFGTEVLMVESVANRMAAELASRRFEAEVIPFRVERDPFTWR

Sequences:

>Translated_372_residues
MITPKVSDIVGIVNKIAPHGLAEEWDNVGLMVGDPSAPATRIMVALDGTPDTIDAAIADRCQILLTHHPFIFRPLKHISS
ADPTGRLVLKAASHALAVISLHTNFDIASGGMNDLLAERLGVSNCRPLKVTTSESLVKLVVFVPTGHEERVRDALFRFSG
VVGAYSDCSFQCAGTGTFKPLAGAQPFIGQVGRREYVEESRIEVLLEKRNLPAAVTALVKAHPYEEPAFDLFPLLNRGPE
QGLGRIGVLAEETTVSAFADEVKERLGLAGVRFVGDGARPVRKVALCGGSGMSLLRDAQRQGADVLVTGDVKYHEGRDAE
ALGVALVDGGHFGTEVLMVESVANRMAAELASRRFEAEVIPFRVERDPFTWR
>Mature_372_residues
MITPKVSDIVGIVNKIAPHGLAEEWDNVGLMVGDPSAPATRIMVALDGTPDTIDAAIADRCQILLTHHPFIFRPLKHISS
ADPTGRLVLKAASHALAVISLHTNFDIASGGMNDLLAERLGVSNCRPLKVTTSESLVKLVVFVPTGHEERVRDALFRFSG
VVGAYSDCSFQCAGTGTFKPLAGAQPFIGQVGRREYVEESRIEVLLEKRNLPAAVTALVKAHPYEEPAFDLFPLLNRGPE
QGLGRIGVLAEETTVSAFADEVKERLGLAGVRFVGDGARPVRKVALCGGSGMSLLRDAQRQGADVLVTGDVKYHEGRDAE
ALGVALVDGGHFGTEVLMVESVANRMAAELASRRFEAEVIPFRVERDPFTWR

Specific function: Unknown

COG id: COG3323

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI209862879, Length=376, Percent_Identity=26.5957446808511, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI215272360, Length=376, Percent_Identity=26.5957446808511, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI56605983, Length=376, Percent_Identity=26.5957446808511, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI215272362, Length=122, Percent_Identity=35.2459016393443, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19921430, Length=127, Percent_Identity=31.496062992126, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 40037; Mature: 40037

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPKVSDIVGIVNKIAPHGLAEEWDNVGLMVGDPSAPATRIMVALDGTPDTIDAAIADR
CCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHH
CQILLTHHPFIFRPLKHISSADPTGRLVLKAASHALAVISLHTNFDIASGGMNDLLAERL
HEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECCCEECCCCHHHHHHHHH
GVSNCRPLKVTTSESLVKLVVFVPTGHEERVRDALFRFSGVVGAYSDCSFQCAGTGTFKP
CCCCCCEEEEECHHCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC
LAGAQPFIGQVGRREYVEESRIEVLLEKRNLPAAVTALVKAHPYEEPAFDLFPLLNRGPE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCC
QGLGRIGVLAEETTVSAFADEVKERLGLAGVRFVGDGARPVRKVALCGGSGMSLLRDAQR
CCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHEEEECCCCHHHHHHHHH
QGADVLVTGDVKYHEGRDAEALGVALVDGGHFGTEVLMVESVANRMAAELASRRFEAEVI
CCCCEEEECCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
PFRVERDPFTWR
EEEEECCCCCCC
>Mature Secondary Structure
MITPKVSDIVGIVNKIAPHGLAEEWDNVGLMVGDPSAPATRIMVALDGTPDTIDAAIADR
CCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHH
CQILLTHHPFIFRPLKHISSADPTGRLVLKAASHALAVISLHTNFDIASGGMNDLLAERL
HEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECCCEECCCCHHHHHHHHH
GVSNCRPLKVTTSESLVKLVVFVPTGHEERVRDALFRFSGVVGAYSDCSFQCAGTGTFKP
CCCCCCEEEEECHHCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC
LAGAQPFIGQVGRREYVEESRIEVLLEKRNLPAAVTALVKAHPYEEPAFDLFPLLNRGPE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCC
QGLGRIGVLAEETTVSAFADEVKERLGLAGVRFVGDGARPVRKVALCGGSGMSLLRDAQR
CCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHEEEECCCCHHHHHHHHH
QGADVLVTGDVKYHEGRDAEALGVALVDGGHFGTEVLMVESVANRMAAELASRRFEAEVI
CCCCEEEECCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
PFRVERDPFTWR
EEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]