| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is bpr [H]
Identifier: 78221515
GI number: 78221515
Start: 326003
End: 328753
Strand: Direct
Name: bpr [H]
Synonym: Gmet_0292
Alternate gene names: 78221515
Gene position: 326003-328753 (Clockwise)
Preceding gene: 78221514
Following gene: 78221519
Centisome position: 8.16
GC content: 63.98
Gene sequence:
>2751_bases ATGAAGATTGTCAGTAAGACGTCAGCGCAGTTCCTTTTTGTCGCGGCTCTGGGAGCAGGCGCTCTGACAGCGTTTCAGCT GAAGGGGACGGAGGCGCTGGCCTATCCCGCGTACTTCACGACCAATTGTGCCGGCTGCCATGCGGCACCGGTGGCCGCTA CCTGCAATGGATGCCACCACCACGGCCCCGTGTCGCTGAAAGGCGCCACCAACAAAACGTCCTATGCCCCCGGAGAGTCC GTATCGGTAACCATCAGCGGCGGCAGCCAGAGCGGCTGGGTCAGGGCCATCCTGTATGACCAGAACAATCAGCAGGTGGC CATATCGAGCGGCAACGATAGCGGCATGGGGCACTCGACAACGTTCCCTGCGACCCTGAGTGCGCCGGCGCCGACTGTCC CGGGAACGTACACCTGGAAAGCTGCCTGGTTCGGCAACAGTTATGATTCTACCAATCCGACCGCGAGCGCCCATGGCGAG GTGTCGGTGAATACCAATTCGTTCACCGTTGTGGCTCCGGTCGACACCACCGTCCCGGTCGTGAGCGCCTTTACCCTTCC GGCCACTTCTACGAGCCTCACCGTTGCGGTCAGCTCCTTCACCGCCACCGACAACGTGGGCGTCACCGGCTACCTGATCA CCACGAGCGCCACCGCGCCCGCAGCAAGCGCCACCGGGTGGAGCGCCACCGCCCCCACGAGCGTCACCGCTGTTGCCGGC AGCAACACCTTCTACGCCTGGGCTAAGGACGCAGCAGGGAACGTCTCCCTCGCCAAGAGCGCCAGCGTGACGGTCACCCT TCCTGACACCGTCGTCCCGGTCGTGAGCGCCTTCACGCTTCCGGCCACCGCCACGAGCCTTACCGTTGCGGTCAGCTCCT TCACCGCCACCGACAACGTGGGCGTCACCGGCTACCTGATCACCAAGAGCGCCACCGCGCCCGCAGCAAGCGCCACCGGG TGGACGGCCACCGCCCCCACGAGCGTGACCGCCGTGGCCGGCAGCAACACCTTTTACGCCTGGGCCAAGGACGCAGCGGG CAACGTCTCGCTCGCCAAGAGCGCCAGCGTCACGGTCACGCTCCCTGACGCCACCGTCCCGGTCGTGAGCGCCTTCACCC TGCCTGCGACCTCCACGAGCCTCACCGTTGCGGTCAGCTCCTTCACCGCCACCGACAACGTGGGCGTCACCGGCTACCTG ATCACCAAGAGCGCCACCGCGCCCGCAGCAAGCGCCACCGGGTGGACGGCCACCGCCCCCACGAGCGTGACCGCCGTGGC CGGCAGCAACACCTTTTACGCCTGGGCCAAGGACGCAGCAGGGAACGTCTCCCTCGCCAAGAGCGCCAGCGTGACGGTCA CCCTTCCTGATGCTACCGCCCCGGTGGTGAGCGCCTTTACCCTTCCGGCCACTTCTACGAGCCTCACCGTTGCGGTCAGC TCCTTCACCGCCACCGACAACGTCGGCGTCACCGGCTACCTGATCACCAAGAGCGCCACCGCGCCCGCAGCAAGCGCCAC CGGGTGGACGGCCACCGCCCCCACGAGCGTGACCGCCGTAGCCGGCAATAACACCTTCTACGCCTGGGCCAAGGACGCAG CAGGGAACGTCTCCCTCGCCAAGAGCGCCAGCGTGACGGTAACGCTCCCTGACACCACCGCCCCGGTGGTGAGCGCCTTT ACCCTTCCGGCCACTTCTACGAGCCTCACCGTTGCGGTCAGCTCCTTTACCGCCACCGACAACGTCGGCGTCACCGGTTA CCTGATCACCACCAGCGCCACGGCACCGGCGGCATCCGCCACCGGCTGGAGCGCCACTGCCCCCACGAGCGTGACCGCCG TGGCCGGCAATAACACCTTCTACGCCTGGGCCAAGGATGCAGCAGGCAACGTCTCCCTCTCCAAGAGCGCCAGCGTGACG GTTACCGTCGCCCCTGCGGACCTCACCCTGACCATATCCGCCCTGGCCAACGGTTCGTACACCAACAAGGGAACCTTGAA CATCAGCGGCGTCGCCATTGATGCCGCCGGCATCAAGTCCGTAACCGTCAACGGGCAGACCGTTACCGTCAATCCGGATG GTTCCTTCAGCTATGCACTGTCACTCCAGTCCGGCGCCAACACCGTAACGGTCGTCGCCACCGACAATGCCGGCACCCAG AAGACCGATATCCGCACCATAACCTATGACCCGGCCGCGCCGGTTCTGACGGTCTCCGCGCCGGCCGACAACAGCACCAC CACCCAGTCGTTCATTACCTTGAACGGCACCATCAGCGAAACCTCCACCGTCAGCGTCAGCGTCAACGGCAGCGCCCCGC AAACCGCTGCCATCAGCGGCAACTCGTATACCGCCACCGTTTATCTGGTGAAAGGTGTGAACACCATCAGCATCAGCGCC ACCGACCTGGCCGGCAACATCACAACCGCCAAGAGGACGGTAACCTACAGCGGCGTGAGCAATAACCTCGCACTTGCGGT TACCTTCCCCAATCAGGACATTACCACCAAGTATCCGTACCTGGTCCTCAAGGGGACGGTTGTCGACAACGAGAAAGTGG CCGTCAAGATTATCATGGACGGCAAGACCTACATCCCTGTAGTTGATGATGGCGTATTCATGCAGCGTCTCGTTTTCACC ACTCCCAAGCTGTATGCCATTACCGTCATTGCCACGGATGCGGCAGGCAACAAGAGCACGGTCACTCGTAACGTGATTTA CCGTCCCGGGTATGACCACGATGATGATTAA
Upstream 100 bases:
>100_bases AGGAGATCATGCGCCAGAAAAGAAAAATTCCCAGTACCGATCGATTGAGCGAAAGCAGAACGAGAACATTTTTTGAGATC AGGGGATGAAAGGAGTCAAA
Downstream 100 bases:
>100_bases TCTGTACCAGTAGTGACGTAGATGAAAAAAGCCACCCCCGACGGGGTGGCTTTTTTCTTTCGCTGGCATGACGGATAAGC GACACGCCGGGGCGTCCTCA
Product: fibronectin type III domain-containing protein
Products: NA
Alternate protein names: 90 kDa serine proteinase; Esterase; RP-I protease [H]
Number of amino acids: Translated: 916; Mature: 916
Protein sequence:
>916_residues MKIVSKTSAQFLFVAALGAGALTAFQLKGTEALAYPAYFTTNCAGCHAAPVAATCNGCHHHGPVSLKGATNKTSYAPGES VSVTISGGSQSGWVRAILYDQNNQQVAISSGNDSGMGHSTTFPATLSAPAPTVPGTYTWKAAWFGNSYDSTNPTASAHGE VSVNTNSFTVVAPVDTTVPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASATGWSATAPTSVTAVAG SNTFYAWAKDAAGNVSLAKSASVTVTLPDTVVPVVSAFTLPATATSLTVAVSSFTATDNVGVTGYLITKSATAPAASATG WTATAPTSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVTLPDATVPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYL ITKSATAPAASATGWTATAPTSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVTLPDATAPVVSAFTLPATSTSLTVAVS SFTATDNVGVTGYLITKSATAPAASATGWTATAPTSVTAVAGNNTFYAWAKDAAGNVSLAKSASVTVTLPDTTAPVVSAF TLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASATGWSATAPTSVTAVAGNNTFYAWAKDAAGNVSLSKSASVT VTVAPADLTLTISALANGSYTNKGTLNISGVAIDAAGIKSVTVNGQTVTVNPDGSFSYALSLQSGANTVTVVATDNAGTQ KTDIRTITYDPAAPVLTVSAPADNSTTTQSFITLNGTISETSTVSVSVNGSAPQTAAISGNSYTATVYLVKGVNTISISA TDLAGNITTAKRTVTYSGVSNNLALAVTFPNQDITTKYPYLVLKGTVVDNEKVAVKIIMDGKTYIPVVDDGVFMQRLVFT TPKLYAITVIATDAAGNKSTVTRNVIYRPGYDHDDD
Sequences:
>Translated_916_residues MKIVSKTSAQFLFVAALGAGALTAFQLKGTEALAYPAYFTTNCAGCHAAPVAATCNGCHHHGPVSLKGATNKTSYAPGES VSVTISGGSQSGWVRAILYDQNNQQVAISSGNDSGMGHSTTFPATLSAPAPTVPGTYTWKAAWFGNSYDSTNPTASAHGE VSVNTNSFTVVAPVDTTVPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASATGWSATAPTSVTAVAG SNTFYAWAKDAAGNVSLAKSASVTVTLPDTVVPVVSAFTLPATATSLTVAVSSFTATDNVGVTGYLITKSATAPAASATG WTATAPTSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVTLPDATVPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYL ITKSATAPAASATGWTATAPTSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVTLPDATAPVVSAFTLPATSTSLTVAVS SFTATDNVGVTGYLITKSATAPAASATGWTATAPTSVTAVAGNNTFYAWAKDAAGNVSLAKSASVTVTLPDTTAPVVSAF TLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASATGWSATAPTSVTAVAGNNTFYAWAKDAAGNVSLSKSASVT VTVAPADLTLTISALANGSYTNKGTLNISGVAIDAAGIKSVTVNGQTVTVNPDGSFSYALSLQSGANTVTVVATDNAGTQ KTDIRTITYDPAAPVLTVSAPADNSTTTQSFITLNGTISETSTVSVSVNGSAPQTAAISGNSYTATVYLVKGVNTISISA TDLAGNITTAKRTVTYSGVSNNLALAVTFPNQDITTKYPYLVLKGTVVDNEKVAVKIIMDGKTYIPVVDDGVFMQRLVFT TPKLYAITVIATDAAGNKSTVTRNVIYRPGYDHDDD >Mature_916_residues MKIVSKTSAQFLFVAALGAGALTAFQLKGTEALAYPAYFTTNCAGCHAAPVAATCNGCHHHGPVSLKGATNKTSYAPGES VSVTISGGSQSGWVRAILYDQNNQQVAISSGNDSGMGHSTTFPATLSAPAPTVPGTYTWKAAWFGNSYDSTNPTASAHGE VSVNTNSFTVVAPVDTTVPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASATGWSATAPTSVTAVAG SNTFYAWAKDAAGNVSLAKSASVTVTLPDTVVPVVSAFTLPATATSLTVAVSSFTATDNVGVTGYLITKSATAPAASATG WTATAPTSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVTLPDATVPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYL ITKSATAPAASATGWTATAPTSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVTLPDATAPVVSAFTLPATSTSLTVAVS SFTATDNVGVTGYLITKSATAPAASATGWTATAPTSVTAVAGNNTFYAWAKDAAGNVSLAKSASVTVTLPDTTAPVVSAF TLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASATGWSATAPTSVTAVAGNNTFYAWAKDAAGNVSLSKSASVT VTVAPADLTLTISALANGSYTNKGTLNISGVAIDAAGIKSVTVNGQTVTVNPDGSFSYALSLQSGANTVTVVATDNAGTQ KTDIRTITYDPAAPVLTVSAPADNSTTTQSFITLNGTISETSTVSVSVNGSAPQTAAISGNSYTATVYLVKGVNTISISA TDLAGNITTAKRTVTYSGVSNNLALAVTFPNQDITTKYPYLVLKGTVVDNEKVAVKIIMDGKTYIPVVDDGVFMQRLVFT TPKLYAITVIATDAAGNKSTVTRNVIYRPGYDHDDD
Specific function: Unknown
COG id: COG4412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008969 - InterPro: IPR014766 - InterPro: IPR008985 - InterPro: IPR012103 - InterPro: IPR008757 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF05547 Peptidase_M6; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 91649; Mature: 91649
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVSKTSAQFLFVAALGAGALTAFQLKGTEALAYPAYFTTNCAGCHAAPVAATCNGCHH CCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEECEEEECCCCCCCCCCCEEECCCCCC HGPVSLKGATNKTSYAPGESVSVTISGGSQSGWVRAILYDQNNQQVAISSGNDSGMGHST CCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCE TFPATLSAPAPTVPGTYTWKAAWFGNSYDSTNPTASAHGEVSVNTNSFTVVAPVDTTVPV ECCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEE VSAFTLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASATGWSATAPTSVTAVAG EEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEC SNTFYAWAKDAAGNVSLAKSASVTVTLPDTVVPVVSAFTLPATATSLTVAVSSFTATDNV CCEEEEEECCCCCCEEEECCCEEEEECCCHHHHHHHHEECCCCCCEEEEEEEEEEECCCC GVTGYLITKSATAPAASATGWTATAPTSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVT CEEEEEEEECCCCCCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCEEEECCCEEEEE LPDATVPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYLITKSATAPAASATGWTATAP ECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEECC TSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVTLPDATAPVVSAFTLPATSTSLTVAVS CEEEEEECCCEEEEEECCCCCCEEEECCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEE SFTATDNVGVTGYLITKSATAPAASATGWTATAPTSVTAVAGNNTFYAWAKDAAGNVSLA EEEECCCCCEEEEEEEECCCCCCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCEEEE KSASVTVTLPDTTAPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASA CCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCC TGWSATAPTSVTAVAGNNTFYAWAKDAAGNVSLSKSASVTVTVAPADLTLTISALANGSY CCCCCCCCCEEEEEECCCEEEEEECCCCCCEEECCCCEEEEEEECCCEEEEEEEECCCCC TNKGTLNISGVAIDAAGIKSVTVNGQTVTVNPDGSFSYALSLQSGANTVTVVATDNAGTQ CCCCEEEEEEEEEECCCCEEEEECCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCC KTDIRTITYDPAAPVLTVSAPADNSTTTQSFITLNGTISETSTVSVSVNGSAPQTAAISG CCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEECEECCCEEEEEEECCCCCCEEEECC NSYTATVYLVKGVNTISISATDLAGNITTAKRTVTYSGVSNNLALAVTFPNQDITTKYPY CCEEEEEEEEECCEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCE LVLKGTVVDNEKVAVKIIMDGKTYIPVVDDGVFMQRLVFTTPKLYAITVIATDAAGNKST EEEEEEEECCCCEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEEEEECCCCCCCE VTRNVIYRPGYDHDDD EEEEEEECCCCCCCCC >Mature Secondary Structure MKIVSKTSAQFLFVAALGAGALTAFQLKGTEALAYPAYFTTNCAGCHAAPVAATCNGCHH CCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEECEEEECCCCCCCCCCCEEECCCCCC HGPVSLKGATNKTSYAPGESVSVTISGGSQSGWVRAILYDQNNQQVAISSGNDSGMGHST CCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCE TFPATLSAPAPTVPGTYTWKAAWFGNSYDSTNPTASAHGEVSVNTNSFTVVAPVDTTVPV ECCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEE VSAFTLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASATGWSATAPTSVTAVAG EEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEC SNTFYAWAKDAAGNVSLAKSASVTVTLPDTVVPVVSAFTLPATATSLTVAVSSFTATDNV CCEEEEEECCCCCCEEEECCCEEEEECCCHHHHHHHHEECCCCCCEEEEEEEEEEECCCC GVTGYLITKSATAPAASATGWTATAPTSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVT CEEEEEEEECCCCCCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCEEEECCCEEEEE LPDATVPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYLITKSATAPAASATGWTATAP ECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEECC TSVTAVAGSNTFYAWAKDAAGNVSLAKSASVTVTLPDATAPVVSAFTLPATSTSLTVAVS CEEEEEECCCEEEEEECCCCCCEEEECCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEE SFTATDNVGVTGYLITKSATAPAASATGWTATAPTSVTAVAGNNTFYAWAKDAAGNVSLA EEEECCCCCEEEEEEEECCCCCCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCEEEE KSASVTVTLPDTTAPVVSAFTLPATSTSLTVAVSSFTATDNVGVTGYLITTSATAPAASA CCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCC TGWSATAPTSVTAVAGNNTFYAWAKDAAGNVSLSKSASVTVTVAPADLTLTISALANGSY CCCCCCCCCEEEEEECCCEEEEEECCCCCCEEECCCCEEEEEEECCCEEEEEEEECCCCC TNKGTLNISGVAIDAAGIKSVTVNGQTVTVNPDGSFSYALSLQSGANTVTVVATDNAGTQ CCCCEEEEEEEEEECCCCEEEEECCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCC KTDIRTITYDPAAPVLTVSAPADNSTTTQSFITLNGTISETSTVSVSVNGSAPQTAAISG CCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEECEECCCEEEEEEECCCCCCEEEECC NSYTATVYLVKGVNTISISATDLAGNITTAKRTVTYSGVSNNLALAVTFPNQDITTKYPY CCEEEEEEEEECCEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCE LVLKGTVVDNEKVAVKIIMDGKTYIPVVDDGVFMQRLVFTTPKLYAITVIATDAAGNKST EEEEEEEECCCCEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEEEEECCCCCCCE VTRNVIYRPGYDHDDD EEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2106512; 2118514; 2108961; 9384377; 3139638; 2106671 [H]