| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221511
Identifier: 78221511
GI number: 78221511
Start: 320790
End: 321503
Strand: Direct
Name: 78221511
Synonym: Gmet_0288
Alternate gene names: NA
Gene position: 320790-321503 (Clockwise)
Preceding gene: 78221510
Following gene: 78221512
Centisome position: 8.02
GC content: 57.7
Gene sequence:
>714_bases ATGTCGGCAACCGTAATCGTCAATGGTCAGACCGTCGTCCACAAAGACAGCGGGGGCGTGCTCACCACTGGCCCCGATGT CTGCCTTACCCCCATGGGGCCTTCGGTAGTGCCGATTCCCTACACCAATATCGCGGTTTCCGCCGATACCAGCCAGGGGA GTACCAGCGTTGCCATGGACAGCAACCCCATCATGCTCAAGGGGTCGGTTTTCTCCAAAAGTACCGGCGACGAACCGGGG AAGGTCGGCGGTGTTTCCTCCGGGATTACCAAAGGGAAGGCCAAGTTTGTCAACTATTCCAGTGATGTCTTTGCCGATGG GAAGCCGGTCTGCCGACGGCTTGACCCCATGGTGAGCAACCTCTCGGCTGCGGGAAACACCCCACCCGCGCCACTGCAGC AGGGAAATGCGAGGGCACGGGGCAAGCAGGCGCAAGGCCATCTCTTGTCGGTCGCCTTGGTGTTTGAACACCCCGATGTG GTCACGGGCCGGACGACCCAGCCGCTCGTCGATCTCAAATACTCATTGAACGGCCCCAAAACGATCACTGTAGCTAAGAG CGAACCCTACACTGGAATCCAGGAATACGTCCCGCAGGGTGGGTACGCCCTTGAATTTGACCGCAATGACCTCAAAGAGA AACTCACGGAAAGGTCAGTCAGTGAAAAACAATCATCCAAAGGGGCTGCGTTCAGGAATCACAAGACGAGCTGA
Upstream 100 bases:
>100_bases CCTGGAGCACGGTGACCACGAAGAACGGAAGGGCTTTATTGAACAGCTCCGTGCTCAACTTGCCGGTTAATATCCACGTC CGGCACAAGGAGAAAGAAGC
Downstream 100 bases:
>100_bases TTCGGACACAATTGTTTGAACCAAGAGGGATCCATGAAAACTGTATTCAGAAGAGCACTGCTTGTCATAACTGCAACTAT ACTAACCGTTTCCTTTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSATVIVNGQTVVHKDSGGVLTTGPDVCLTPMGPSVVPIPYTNIAVSADTSQGSTSVAMDSNPIMLKGSVFSKSTGDEPG KVGGVSSGITKGKAKFVNYSSDVFADGKPVCRRLDPMVSNLSAAGNTPPAPLQQGNARARGKQAQGHLLSVALVFEHPDV VTGRTTQPLVDLKYSLNGPKTITVAKSEPYTGIQEYVPQGGYALEFDRNDLKEKLTERSVSEKQSSKGAAFRNHKTS
Sequences:
>Translated_237_residues MSATVIVNGQTVVHKDSGGVLTTGPDVCLTPMGPSVVPIPYTNIAVSADTSQGSTSVAMDSNPIMLKGSVFSKSTGDEPG KVGGVSSGITKGKAKFVNYSSDVFADGKPVCRRLDPMVSNLSAAGNTPPAPLQQGNARARGKQAQGHLLSVALVFEHPDV VTGRTTQPLVDLKYSLNGPKTITVAKSEPYTGIQEYVPQGGYALEFDRNDLKEKLTERSVSEKQSSKGAAFRNHKTS >Mature_236_residues SATVIVNGQTVVHKDSGGVLTTGPDVCLTPMGPSVVPIPYTNIAVSADTSQGSTSVAMDSNPIMLKGSVFSKSTGDEPGK VGGVSSGITKGKAKFVNYSSDVFADGKPVCRRLDPMVSNLSAAGNTPPAPLQQGNARARGKQAQGHLLSVALVFEHPDVV TGRTTQPLVDLKYSLNGPKTITVAKSEPYTGIQEYVPQGGYALEFDRNDLKEKLTERSVSEKQSSKGAAFRNHKTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24850; Mature: 24719
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATVIVNGQTVVHKDSGGVLTTGPDVCLTPMGPSVVPIPYTNIAVSADTSQGSTSVAMD CCEEEEECCCEEEEECCCCEEECCCCEEEECCCCCEEECCCCCEEEEECCCCCCEEEEEC SNPIMLKGSVFSKSTGDEPGKVGGVSSGITKGKAKFVNYSSDVFADGKPVCRRLDPMVSN CCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH LSAAGNTPPAPLQQGNARARGKQAQGHLLSVALVFEHPDVVTGRTTQPLVDLKYSLNGPK HHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEECCCCCCCEEEEEEECCCCE TITVAKSEPYTGIQEYVPQGGYALEFDRNDLKEKLTERSVSEKQSSKGAAFRNHKTS EEEEECCCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SATVIVNGQTVVHKDSGGVLTTGPDVCLTPMGPSVVPIPYTNIAVSADTSQGSTSVAMD CEEEEECCCEEEEECCCCEEECCCCEEEECCCCCEEECCCCCEEEEECCCCCCEEEEEC SNPIMLKGSVFSKSTGDEPGKVGGVSSGITKGKAKFVNYSSDVFADGKPVCRRLDPMVSN CCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH LSAAGNTPPAPLQQGNARARGKQAQGHLLSVALVFEHPDVVTGRTTQPLVDLKYSLNGPK HHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEECCCCCCCEEEEEEECCCCE TITVAKSEPYTGIQEYVPQGGYALEFDRNDLKEKLTERSVSEKQSSKGAAFRNHKTS EEEEECCCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA