| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221510
Identifier: 78221510
GI number: 78221510
Start: 319623
End: 320759
Strand: Direct
Name: 78221510
Synonym: Gmet_0287
Alternate gene names: NA
Gene position: 319623-320759 (Clockwise)
Preceding gene: 78221509
Following gene: 78221511
Centisome position: 8.0
GC content: 58.4
Gene sequence:
>1137_bases ATGGCGTCCCAGTCCCGCAACCAACCAGACAAAACGGTTACGGATCGTGTCGTCATAACCGGCATTGGAACTGTAACCTC CCTTGGCTGCTCCCAATGGAGCACAGCCCTCGCATTGCGTTTCAGGAAAAGCTCCTGGTGCGAGCACGAAACGGTGCTCG TGGCCGACGATCCGTACGGTGCCGTACTTCGTGGGGCAACTATCAGTCGCATCCCGGAAGAAATCATCTCTCCTGAACTG GACGGCGCCGAGCGAGCCGAGGCTCTATTTCATCCTGCATTGAAAGAGTGCATGGCCGGGCTTTCAATCGCCGAGCAAAA ACGACTTGTCTGCCGGATTGATAATTTTATCGATTATGAGCAGCATCTTTTCCCTTCTCTCTTGCAGGAGGCATTCCCCG GCCTCTCCCTTGAGCATGGCCAGAAGCCGATCGAGCTTGGCCGCTGCTCGCTTTTTGAACGGATCATCCAGGCCGGAGGT GAGCTTTTGGCGGGAAATGCTGAGCGTATTCTGGTCGGATGTGTCGATTCCCTCTGCGCTACTTCCTGGCTCATGTCAGT TTGTGATGAGGATGTGTTGAAAGACTCATTGACTCCCGAAGGGATCATTGCCGGAGAAGCGGCGGGAGCTGTTCTACTTG AACGGGAAGCCGCCGCGCGGCGGCGCAATGCGCCGGTTCTGGCCATTCTTTCGTCATGGGGACGGGGGACGGAGCCCAAT CTGTGGCACGGTCCCATTCCCTCTACCGGGCGGGGACTCACCGACGCATTCCTTGAAGCGATTTCTCCTCACGGGGATGG AGGAAAAGGTGTCGTAACGGTCATCGCCGACCTTAACGGTGACCGGCACCGTGCCCTTGACTGGGCCTACACCGAGGGGC GGATTTTTATCGATGGTGATCGGGAGCCGGAACTGCGGCATCCCGCTTTCATCGCCGGGGATTGCGGCAAGGCCACGGGA GCGCTTCTCCTTGCCGACGCCTTGGGGCGTTTCGCCTTCCATCCAGGGTTTCGGGGGACCCTTGCCCTCAGCACCTCCGA TGAATCGGGCGCCAGACGGGTCATCTGCCTGGAGCACGGTGACCACGAAGAACGGAAGGGCTTTATTGAACAGCTCCGTG CTCAACTTGCCGGTTAA
Upstream 100 bases:
>100_bases CTGAAATCCAGCGGCGAGATTGTCGTTACGGGAGCGACCATAACCGAGAAAGCCAGCGGTGAAATCGTTATAAAGGGTGC CAGGACTTCGGTGAATTGAA
Downstream 100 bases:
>100_bases TATCCACGTCCGGCACAAGGAGAAAGAAGCATGTCGGCAACCGTAATCGTCAATGGTCAGACCGTCGTCCACAAAGACAG CGGGGGCGTGCTCACCACTG
Product: 3-oxoacyl-(acyl carrier protein) synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MASQSRNQPDKTVTDRVVITGIGTVTSLGCSQWSTALALRFRKSSWCEHETVLVADDPYGAVLRGATISRIPEEIISPEL DGAERAEALFHPALKECMAGLSIAEQKRLVCRIDNFIDYEQHLFPSLLQEAFPGLSLEHGQKPIELGRCSLFERIIQAGG ELLAGNAERILVGCVDSLCATSWLMSVCDEDVLKDSLTPEGIIAGEAAGAVLLEREAAARRRNAPVLAILSSWGRGTEPN LWHGPIPSTGRGLTDAFLEAISPHGDGGKGVVTVIADLNGDRHRALDWAYTEGRIFIDGDREPELRHPAFIAGDCGKATG ALLLADALGRFAFHPGFRGTLALSTSDESGARRVICLEHGDHEERKGFIEQLRAQLAG
Sequences:
>Translated_378_residues MASQSRNQPDKTVTDRVVITGIGTVTSLGCSQWSTALALRFRKSSWCEHETVLVADDPYGAVLRGATISRIPEEIISPEL DGAERAEALFHPALKECMAGLSIAEQKRLVCRIDNFIDYEQHLFPSLLQEAFPGLSLEHGQKPIELGRCSLFERIIQAGG ELLAGNAERILVGCVDSLCATSWLMSVCDEDVLKDSLTPEGIIAGEAAGAVLLEREAAARRRNAPVLAILSSWGRGTEPN LWHGPIPSTGRGLTDAFLEAISPHGDGGKGVVTVIADLNGDRHRALDWAYTEGRIFIDGDREPELRHPAFIAGDCGKATG ALLLADALGRFAFHPGFRGTLALSTSDESGARRVICLEHGDHEERKGFIEQLRAQLAG >Mature_377_residues ASQSRNQPDKTVTDRVVITGIGTVTSLGCSQWSTALALRFRKSSWCEHETVLVADDPYGAVLRGATISRIPEEIISPELD GAERAEALFHPALKECMAGLSIAEQKRLVCRIDNFIDYEQHLFPSLLQEAFPGLSLEHGQKPIELGRCSLFERIIQAGGE LLAGNAERILVGCVDSLCATSWLMSVCDEDVLKDSLTPEGIIAGEAAGAVLLEREAAARRRNAPVLAILSSWGRGTEPNL WHGPIPSTGRGLTDAFLEAISPHGDGGKGVVTVIADLNGDRHRALDWAYTEGRIFIDGDREPELRHPAFIAGDCGKATGA LLLADALGRFAFHPGFRGTLALSTSDESGARRVICLEHGDHEERKGFIEQLRAQLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40793; Mature: 40661
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQSRNQPDKTVTDRVVITGIGTVTSLGCSQWSTALALRFRKSSWCEHETVLVADDPYG CCCCCCCCCCCHHHCEEEEEECCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC AVLRGATISRIPEEIISPELDGAERAEALFHPALKECMAGLSIAEQKRLVCRIDNFIDYE HHHCCCHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHH QHLFPSLLQEAFPGLSLEHGQKPIELGRCSLFERIIQAGGELLAGNAERILVGCVDSLCA HHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEHHHHHHHHHH TSWLMSVCDEDVLKDSLTPEGIIAGEAAGAVLLEREAAARRRNAPVLAILSSWGRGTEPN HHHHHHHHHHHHHHHCCCCCCEEECCCCCHHEEHHHHHHHHCCCCEEEEEHHCCCCCCCC LWHGPIPSTGRGLTDAFLEAISPHGDGGKGVVTVIADLNGDRHRALDWAYTEGRIFIDGD CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHEEEEEEECCEEEECCC REPELRHPAFIAGDCGKATGALLLADALGRFAFHPGFRGTLALSTSDESGARRVICLEHG CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECC DHEERKGFIEQLRAQLAG CCHHHHHHHHHHHHHHCC >Mature Secondary Structure ASQSRNQPDKTVTDRVVITGIGTVTSLGCSQWSTALALRFRKSSWCEHETVLVADDPYG CCCCCCCCCCHHHCEEEEEECCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC AVLRGATISRIPEEIISPELDGAERAEALFHPALKECMAGLSIAEQKRLVCRIDNFIDYE HHHCCCHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHH QHLFPSLLQEAFPGLSLEHGQKPIELGRCSLFERIIQAGGELLAGNAERILVGCVDSLCA HHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEHHHHHHHHHH TSWLMSVCDEDVLKDSLTPEGIIAGEAAGAVLLEREAAARRRNAPVLAILSSWGRGTEPN HHHHHHHHHHHHHHHCCCCCCEEECCCCCHHEEHHHHHHHHCCCCEEEEEHHCCCCCCCC LWHGPIPSTGRGLTDAFLEAISPHGDGGKGVVTVIADLNGDRHRALDWAYTEGRIFIDGD CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHEEEEEEECCEEEECCC REPELRHPAFIAGDCGKATGALLLADALGRFAFHPGFRGTLALSTSDESGARRVICLEHG CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECC DHEERKGFIEQLRAQLAG CCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA