| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221502
Identifier: 78221502
GI number: 78221502
Start: 310458
End: 311936
Strand: Direct
Name: 78221502
Synonym: Gmet_0279
Alternate gene names: NA
Gene position: 310458-311936 (Clockwise)
Preceding gene: 78221501
Following gene: 78221503
Centisome position: 7.77
GC content: 62.41
Gene sequence:
>1479_bases ATGAGCGTAGAACAGCAAAACACCGCAGCAGTCGAGAGCCGGATAGAAGGATCGCTTCTGGAGGAGATTGTCCAGGCCAC GAAGCTCCAGCCCGCCGACGAGGCCTACTCCATCACCAAGAAGGGGGTCGAGGCCCTTATCACCCAACTTCTGGAGCCGG GGACCGAGACCCCGAAGGTCTCCAAGGCGGTCCTCGACGACATGATCGCCGAGATCGACAAGAAGCTTTCCCGGCAGATG GACGAGATCCTCCACAATACCCAGTTCCAGAAGCTGGAATCCTCCTGGCGTTCCCTCCACTTCCTGGTGGACCGGACCGA CTTCCGGGAGAACAACCGGATCGAGATCATGAACGCCACCAAGGATGAGCTCCTGGACGACTTCGAGGATGCTCCCGAGG TGGCCAAGTCGGGGCTCTACAAGACCGTCTATTCCGCCGAGTACGGCCAGTTCGGCGGCAAACCCTACGGCGCCATTATC GGCAACTACGACTTCGGCCCCGGCCCCCAGGACATCAAGCTTCTCCAGAGCCTGGCCGCCGTGTCCGGCATGGCCCACGC CCCCTTCATCGCCGCCGCTTCCCCCCAGTTCTTCGGCTGCGACGACTACACGGCGCTGCCGAACCTCAAAGACATCAAGT CGATCCTCGAAGGCCCCCAGTACGCCAAGTGGCAGTCGTTCCGGGAGAGCGAGGACGCCCGCTACGTGGGGCTGGCCCTG CCCCGGTTCCTCCTGCGGCTCCCCTACGGCGAGGCCACCAAGCCGGTGAAGAGCTTCAACTACGAGGAGAGCGTCTCCGC CGGCCACGACCGCTACTGCTGGGGGAACGCCGCCTTCTCCTTTGCCACGCGGCTTACCGAGAGCTTCGCCAACTTCCGCT GGTGCGCCAACATCATCGGCCCCCAGGGAGGCGGCGCGGTGCATGATCTACCCCTCCACCAGTACGAGGCCATGGGGGCC ATCCAGACCAAGATTCCCACGGAAGTGCTCGTCAGCGAGCGGCGCGAATTCGAACTGGCCGAGGAAGGGTTCATCGCCCT CACCATGAGAAAGGGGAGCGACAACGCCGCCTTCTTCTCCGCCAACTCCGTGCAGAAGCCGAAATACTTCGGCACCAGCA AGGAGGGGAAAGAGGCCGAGCTCAACTACAAGCTGGGGCTCCAGCTCCCCTACATGTTCATCGTGAGCCGCCTCGCCCAC TACCTGAAAGTCATCCAGCGGGAGCACATCGGCACCTGGAAGGAGCGGGGCGACCTGGAAAACGAGCTGAACCTCTGGAT CCGCCAGTATGTCTCCGAGATGGACAACCCCATGCCCGGCGTGCGGAGCAGAAGGCCCCTGCGCCAGGCCCAGGTCACCG TAGAGGAAGTCCCCGGCGAGCCCGGCTGGTACCGGGTCGGCCTTAAGGTTACCCCCCACTTCAAGTACATGGGGGCTTAT TTTACCCTCTCTTTGGTTGGAAAGCTGGATAAAGAATAA
Upstream 100 bases:
>100_bases CGACTTCCGGAGGAAGATCCAGGAACTGATCACCGACGACGCGGCCCGGGCCAAGCTTCTGGCTGAAATCGGCATCGAGG AAGGGTAAGGAGGAGCAACC
Downstream 100 bases:
>100_bases GCTCGTACAGTCGTGAGCGATGAATTCACGGTTTATGTGTTTGCAATACGGCCCATCCCTGGCCGCGTATCCCACACCAC AAGGAGGAAGTAATCAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MSVEQQNTAAVESRIEGSLLEEIVQATKLQPADEAYSITKKGVEALITQLLEPGTETPKVSKAVLDDMIAEIDKKLSRQM DEILHNTQFQKLESSWRSLHFLVDRTDFRENNRIEIMNATKDELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPYGAII GNYDFGPGPQDIKLLQSLAAVSGMAHAPFIAAASPQFFGCDDYTALPNLKDIKSILEGPQYAKWQSFRESEDARYVGLAL PRFLLRLPYGEATKPVKSFNYEESVSAGHDRYCWGNAAFSFATRLTESFANFRWCANIIGPQGGGAVHDLPLHQYEAMGA IQTKIPTEVLVSERREFELAEEGFIALTMRKGSDNAAFFSANSVQKPKYFGTSKEGKEAELNYKLGLQLPYMFIVSRLAH YLKVIQREHIGTWKERGDLENELNLWIRQYVSEMDNPMPGVRSRRPLRQAQVTVEEVPGEPGWYRVGLKVTPHFKYMGAY FTLSLVGKLDKE
Sequences:
>Translated_492_residues MSVEQQNTAAVESRIEGSLLEEIVQATKLQPADEAYSITKKGVEALITQLLEPGTETPKVSKAVLDDMIAEIDKKLSRQM DEILHNTQFQKLESSWRSLHFLVDRTDFRENNRIEIMNATKDELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPYGAII GNYDFGPGPQDIKLLQSLAAVSGMAHAPFIAAASPQFFGCDDYTALPNLKDIKSILEGPQYAKWQSFRESEDARYVGLAL PRFLLRLPYGEATKPVKSFNYEESVSAGHDRYCWGNAAFSFATRLTESFANFRWCANIIGPQGGGAVHDLPLHQYEAMGA IQTKIPTEVLVSERREFELAEEGFIALTMRKGSDNAAFFSANSVQKPKYFGTSKEGKEAELNYKLGLQLPYMFIVSRLAH YLKVIQREHIGTWKERGDLENELNLWIRQYVSEMDNPMPGVRSRRPLRQAQVTVEEVPGEPGWYRVGLKVTPHFKYMGAY FTLSLVGKLDKE >Mature_491_residues SVEQQNTAAVESRIEGSLLEEIVQATKLQPADEAYSITKKGVEALITQLLEPGTETPKVSKAVLDDMIAEIDKKLSRQMD EILHNTQFQKLESSWRSLHFLVDRTDFRENNRIEIMNATKDELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPYGAIIG NYDFGPGPQDIKLLQSLAAVSGMAHAPFIAAASPQFFGCDDYTALPNLKDIKSILEGPQYAKWQSFRESEDARYVGLALP RFLLRLPYGEATKPVKSFNYEESVSAGHDRYCWGNAAFSFATRLTESFANFRWCANIIGPQGGGAVHDLPLHQYEAMGAI QTKIPTEVLVSERREFELAEEGFIALTMRKGSDNAAFFSANSVQKPKYFGTSKEGKEAELNYKLGLQLPYMFIVSRLAHY LKVIQREHIGTWKERGDLENELNLWIRQYVSEMDNPMPGVRSRRPLRQAQVTVEEVPGEPGWYRVGLKVTPHFKYMGAYF TLSLVGKLDKE
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55420; Mature: 55289
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEQQNTAAVESRIEGSLLEEIVQATKLQPADEAYSITKKGVEALITQLLEPGTETPKV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH SKAVLDDMIAEIDKKLSRQMDEILHNTQFQKLESSWRSLHFLVDRTDFRENNRIEIMNAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECC KDELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPYGAIIGNYDFGPGPQDIKLLQSLAA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH VSGMAHAPFIAAASPQFFGCDDYTALPNLKDIKSILEGPQYAKWQSFRESEDARYVGLAL HHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHH PRFLLRLPYGEATKPVKSFNYEESVSAGHDRYCWGNAAFSFATRLTESFANFRWCANIIG HHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCC PQGGGAVHDLPLHQYEAMGAIQTKIPTEVLVSERREFELAEEGFIALTMRKGSDNAAFFS CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEE ANSVQKPKYFGTSKEGKEAELNYKLGLQLPYMFIVSRLAHYLKVIQREHIGTWKERGDLE CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH NELNLWIRQYVSEMDNPMPGVRSRRPLRQAQVTVEEVPGEPGWYRVGLKVTPHFKYMGAY HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHH FTLSLVGKLDKE HHHHHHHHCCCC >Mature Secondary Structure SVEQQNTAAVESRIEGSLLEEIVQATKLQPADEAYSITKKGVEALITQLLEPGTETPKV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH SKAVLDDMIAEIDKKLSRQMDEILHNTQFQKLESSWRSLHFLVDRTDFRENNRIEIMNAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECC KDELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPYGAIIGNYDFGPGPQDIKLLQSLAA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH VSGMAHAPFIAAASPQFFGCDDYTALPNLKDIKSILEGPQYAKWQSFRESEDARYVGLAL HHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHH PRFLLRLPYGEATKPVKSFNYEESVSAGHDRYCWGNAAFSFATRLTESFANFRWCANIIG HHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCC PQGGGAVHDLPLHQYEAMGAIQTKIPTEVLVSERREFELAEEGFIALTMRKGSDNAAFFS CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEE ANSVQKPKYFGTSKEGKEAELNYKLGLQLPYMFIVSRLAHYLKVIQREHIGTWKERGDLE CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH NELNLWIRQYVSEMDNPMPGVRSRRPLRQAQVTVEEVPGEPGWYRVGLKVTPHFKYMGAY HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHH FTLSLVGKLDKE HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA