| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221494
Identifier: 78221494
GI number: 78221494
Start: 300992
End: 301654
Strand: Direct
Name: 78221494
Synonym: Gmet_0271
Alternate gene names: NA
Gene position: 300992-301654 (Clockwise)
Preceding gene: 78221493
Following gene: 78221495
Centisome position: 7.53
GC content: 63.2
Gene sequence:
>663_bases ATGCCCATGAAAATTTTTGTGTGGATGCTTGCCGTTGTTGCGGGGATTCTCGCCTCGTGTGCCTTCATTACCGTCAACGT CTATTTCCCCGAGAAGGAGGTCAAGAAGGCCTTCAAGACCTTGGACGAGAAATACCTGGGGAAGGAGGGGGGGGAGGCGC CCGTCCCGGAACAGCCCCCGGCCGGTGCTGAACCGGCGCCGGCAGAGAAGCCCCAGAGCCGGTTCGAGGGAGCGCGATGG CCCCTCGCGGTGACAGCCACCGCCTGGGCTGCCGAGGATGCGGCCGGCGGCCTGGTGGTTGAGCTTTCGCGGATGCCCGA GGTGGTCAAGGCCTACGAGGAGATGAGAGGACGGCTCACGACCCTCGATCAGTTGCGTGACGGCGGCATTGTGGGAGAAA CCAACCAGGGACTTGTCACGGTCCGCGACCCCTCCCGGATTGCCGGCCTGAAGGGAGCGGTGGACGAGGAGAACGCCAAC CGCAAGACCGTCATTACCGGCATGGCTCGGGCAATCCTGAAGCAGGCGGGGAAGCCCGACACACCGGCCAATATGGGACA GGTTCTCGGCAAGGCGGCCGCCACCTATGCCCAGACGAAACAGGAAACCGCCCGGCCAGGCTGGTGGATCCAGTTGCAAA ACGGAAAGTGGGTACAGAAATGA
Upstream 100 bases:
>100_bases CAGGCGACCCTGACGCCTCATTCCTTCCATTGCAAAAGCTGCCTCCTATGGTTTACTTGAACGTGTCGCCTCCCCGAAAA ACGCCTTCTGGAGTCAGATC
Downstream 100 bases:
>100_bases GCCGATTCGTTCTAATTATCCCGTTCGGAGCCCTCTCCCTCATGCTCGCTGCGTGCTCTTCCTTTCCCTGGTTGACGAAG GAAGAACCGGCCGCCACTTC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPMKIFVWMLAVVAGILASCAFITVNVYFPEKEVKKAFKTLDEKYLGKEGGEAPVPEQPPAGAEPAPAEKPQSRFEGARW PLAVTATAWAAEDAAGGLVVELSRMPEVVKAYEEMRGRLTTLDQLRDGGIVGETNQGLVTVRDPSRIAGLKGAVDEENAN RKTVITGMARAILKQAGKPDTPANMGQVLGKAAATYAQTKQETARPGWWIQLQNGKWVQK
Sequences:
>Translated_220_residues MPMKIFVWMLAVVAGILASCAFITVNVYFPEKEVKKAFKTLDEKYLGKEGGEAPVPEQPPAGAEPAPAEKPQSRFEGARW PLAVTATAWAAEDAAGGLVVELSRMPEVVKAYEEMRGRLTTLDQLRDGGIVGETNQGLVTVRDPSRIAGLKGAVDEENAN RKTVITGMARAILKQAGKPDTPANMGQVLGKAAATYAQTKQETARPGWWIQLQNGKWVQK >Mature_219_residues PMKIFVWMLAVVAGILASCAFITVNVYFPEKEVKKAFKTLDEKYLGKEGGEAPVPEQPPAGAEPAPAEKPQSRFEGARWP LAVTATAWAAEDAAGGLVVELSRMPEVVKAYEEMRGRLTTLDQLRDGGIVGETNQGLVTVRDPSRIAGLKGAVDEENANR KTVITGMARAILKQAGKPDTPANMGQVLGKAAATYAQTKQETARPGWWIQLQNGKWVQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23775; Mature: 23643
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKIFVWMLAVVAGILASCAFITVNVYFPEKEVKKAFKTLDEKYLGKEGGEAPVPEQPP CCHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AGAEPAPAEKPQSRFEGARWPLAVTATAWAAEDAAGGLVVELSRMPEVVKAYEEMRGRLT CCCCCCCCCCCHHHHCCCCCCEEEEEHHHHHCCCCCCEEEEHHHCHHHHHHHHHHHHHHH TLDQLRDGGIVGETNQGLVTVRDPSRIAGLKGAVDEENANRKTVITGMARAILKQAGKPD HHHHHHCCCEECCCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC TPANMGQVLGKAAATYAQTKQETARPGWWIQLQNGKWVQK CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure PMKIFVWMLAVVAGILASCAFITVNVYFPEKEVKKAFKTLDEKYLGKEGGEAPVPEQPP CHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AGAEPAPAEKPQSRFEGARWPLAVTATAWAAEDAAGGLVVELSRMPEVVKAYEEMRGRLT CCCCCCCCCCCHHHHCCCCCCEEEEEHHHHHCCCCCCEEEEHHHCHHHHHHHHHHHHHHH TLDQLRDGGIVGETNQGLVTVRDPSRIAGLKGAVDEENANRKTVITGMARAILKQAGKPD HHHHHHCCCEECCCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC TPANMGQVLGKAAATYAQTKQETARPGWWIQLQNGKWVQK CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA