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The map label for this gene is yceH [C]

Identifier: 78221485

GI number: 78221485

Start: 294363

End: 295022

Strand: Direct

Name: yceH [C]

Synonym: Gmet_0262

Alternate gene names: 78221485

Gene position: 294363-295022 (Clockwise)

Preceding gene: 78221480

Following gene: 78221486

Centisome position: 7.36

GC content: 68.79

Gene sequence:

>660_bases
ATGGAAACCGTCCTGAATTCCTGCGAAATCCGCGTTCTCGGTTGCCTCGTCGAGAAGGAGCTGGCAACCCCCGAGTACTA
TCCCCTCACCCTCAACGCCCTGACGGCGGCCTGCAACCAGAAGTCGAACCGGGATCCGGTCATGGCCCTGGAGGATGCCG
ACGTGGTCCGGGCCCTGGACTCGCTCCGCATGAAGGGATTCGCCCGGCAGTCGGCCGAGGGGGTGCGGGCCATGAAATAC
TGCCACTGCCTGGCCGAGAAGTTCCTCCTGGAGCCCCCGGATCTTGCGGTCCTGGCGGAGCTCCTCGTGCGGGGACCCCA
GACCGTTGGGGAACTCCGGACCCGGGCCGAGCGGATGCGCCCCTTTGCCGACCTGGCGGCGGTGGAGGAAGTCCTGCGGA
TGCTCATGGAGCGGGAGGAGCCCCTCGTCACCCGACTTCCCCGCCAGCCGGGGCGCAAGGAACAGCGCTATGCGCACCTC
TTGGCGGGAGCGCCCGAGGCGGAGGGAGAGGAGAGCATGGCCCCCCCCGAGGGGGCGCGGCTTCAGGTGCGGGCCGAGAA
CGAGCGGGTGGCGAGGCTGGAGGAGGAGGTGACGGCGCTGCGGGCCGAAGTGGCCGAGCTGCGCCGGATGATGGAGGAGT
TCCGGTCCCAGTTCGAGTAA

Upstream 100 bases:

>100_bases
GTTTCCCGTCGGGAGCCCACGACCTTCTTGACCCGGACCACCGGACCCTGTATGGTTTGGGCAGATTATGACCGGTGCTC
CACCGGAAAGGAGATCCCCC

Downstream 100 bases:

>100_bases
TGGGAGGCAAACCAGGCACGGAGGCACACCATGAACACAATCATCAACGGCATCACCCTGGCCTACGACGACCATGGCAG
CGGACCGGCAGTGGTTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
METVLNSCEIRVLGCLVEKELATPEYYPLTLNALTAACNQKSNRDPVMALEDADVVRALDSLRMKGFARQSAEGVRAMKY
CHCLAEKFLLEPPDLAVLAELLVRGPQTVGELRTRAERMRPFADLAAVEEVLRMLMEREEPLVTRLPRQPGRKEQRYAHL
LAGAPEAEGEESMAPPEGARLQVRAENERVARLEEEVTALRAEVAELRRMMEEFRSQFE

Sequences:

>Translated_219_residues
METVLNSCEIRVLGCLVEKELATPEYYPLTLNALTAACNQKSNRDPVMALEDADVVRALDSLRMKGFARQSAEGVRAMKY
CHCLAEKFLLEPPDLAVLAELLVRGPQTVGELRTRAERMRPFADLAAVEEVLRMLMEREEPLVTRLPRQPGRKEQRYAHL
LAGAPEAEGEESMAPPEGARLQVRAENERVARLEEEVTALRAEVAELRRMMEEFRSQFE
>Mature_219_residues
METVLNSCEIRVLGCLVEKELATPEYYPLTLNALTAACNQKSNRDPVMALEDADVVRALDSLRMKGFARQSAEGVRAMKY
CHCLAEKFLLEPPDLAVLAELLVRGPQTVGELRTRAERMRPFADLAAVEEVLRMLMEREEPLVTRLPRQPGRKEQRYAHL
LAGAPEAEGEESMAPPEGARLQVRAENERVARLEEEVTALRAEVAELRRMMEEFRSQFE

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family

Homologues:

Organism=Escherichia coli, GI1787306, Length=221, Percent_Identity=40.7239819004525, Blast_Score=151, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y262_GEOMG (Q39Z17)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_383232.1
- ProteinModelPortal:   Q39Z17
- STRING:   Q39Z17
- GeneID:   3738634
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_0262
- NMPDR:   fig|269799.3.peg.292
- eggNOG:   COG3132
- HOGENOM:   HBG298268
- OMA:   TTPDQYP
- PhylomeDB:   Q39Z17
- ProtClustDB:   CLSK827701
- BioCyc:   GMET269799:GMET_0262-MONOMER
- HAMAP:   MF_01584
- InterPro:   IPR007432
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04337 DUF480

EC number: NA

Molecular weight: Translated: 24779; Mature: 24779

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVLNSCEIRVLGCLVEKELATPEYYPLTLNALTAACNQKSNRDPVMALEDADVVRALD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHH
SLRMKGFARQSAEGVRAMKYCHCLAEKFLLEPPDLAVLAELLVRGPQTVGELRTRAERMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHC
PFADLAAVEEVLRMLMEREEPLVTRLPRQPGRKEQRYAHLLAGAPEAEGEESMAPPEGAR
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
LQVRAENERVARLEEEVTALRAEVAELRRMMEEFRSQFE
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METVLNSCEIRVLGCLVEKELATPEYYPLTLNALTAACNQKSNRDPVMALEDADVVRALD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHH
SLRMKGFARQSAEGVRAMKYCHCLAEKFLLEPPDLAVLAELLVRGPQTVGELRTRAERMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHC
PFADLAAVEEVLRMLMEREEPLVTRLPRQPGRKEQRYAHLLAGAPEAEGEESMAPPEGAR
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
LQVRAENERVARLEEEVTALRAEVAELRRMMEEFRSQFE
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA