| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ydjP [H]
Identifier: 78221486
GI number: 78221486
Start: 295053
End: 295853
Strand: Direct
Name: ydjP [H]
Synonym: Gmet_0263
Alternate gene names: 78221486
Gene position: 295053-295853 (Clockwise)
Preceding gene: 78221485
Following gene: 78221488
Centisome position: 7.38
GC content: 67.29
Gene sequence:
>801_bases ATGAACACAATCATCAACGGCATCACCCTGGCCTACGACGACCATGGCAGCGGACCGGCAGTGGTTCTTGTCCACGGTTT TCCCCTCTGCCGCCGCATGTGGCACCCCCAGATCAAGGCGGTGACCGACGCGGGCTTTCGGCTCGTGACCCTGGATCTGC GGGGATTCGGCGAAAGTGATGCCCCTGAAGGCCCCTATTCCATGGAGCTCTTTGCCGATGACGTGGCGGGGCTCCTGGAC TACCTGGGGATCAATCGGGCGGTGGTGGGAGGGATGTCCATGGGGGGATACGTCCTTTTCAACCTCGTGGAGCGCCATGC CGGAAGGCTCGCGGGGGCCGTCTTCATCACTACCCGCGCCACGGCCGACGACGAAGCGGCGAAGGCCCGCCGGCTCCAGT TGGCCCAGGAAACCATGAAATTCGGCCCCCAGATCATCGCCGATGCCTTCGTGCCGCTTCTCTTCGCCGAGGAGTCCCTC ACCGGGCGGCCGAAACTGGTGGAGGAGGTTGGGGGGTGGATCGTGGGGACCGACTCGCGGGGGCTTGCGGGGGGGCTCCT CGCCATGCGGGAGCGGAAGGACTACAGCGGACTGCTGGGCACCGTCGGGATACCGTCCCTGGCCATAGGGGCCGAGGGGG ACCGGGCCGCGCCCCCGGAGACCGCCCGGGCCATAGCCGCCGGCATCCCCGGCTGCCGGCTCGAAATCGTAACCGAGGCG GGGCACATGGCCAATCTGGAGCACCCTGGGGCCTTCAACGATGCCCTGGTGGGGTTCCTGAAGGGGCTGGGGGCGTGGTG A
Upstream 100 bases:
>100_bases GACGGCGCTGCGGGCCGAAGTGGCCGAGCTGCGCCGGATGATGGAGGAGTTCCGGTCCCAGTTCGAGTAATGGGAGGCAA ACCAGGCACGGAGGCACACC
Downstream 100 bases:
>100_bases TTCCTGTTAGGGGGGGCATTTGCCGCAGACGGACCGGAAGAGCACCGTGCTGAGGTAACGGTCCCCTCTGTCGGGGAGAA GGACGACGATGGTGCTTCCG
Product: Alpha/beta hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MNTIINGITLAYDDHGSGPAVVLVHGFPLCRRMWHPQIKAVTDAGFRLVTLDLRGFGESDAPEGPYSMELFADDVAGLLD YLGINRAVVGGMSMGGYVLFNLVERHAGRLAGAVFITTRATADDEAAKARRLQLAQETMKFGPQIIADAFVPLLFAEESL TGRPKLVEEVGGWIVGTDSRGLAGGLLAMRERKDYSGLLGTVGIPSLAIGAEGDRAAPPETARAIAAGIPGCRLEIVTEA GHMANLEHPGAFNDALVGFLKGLGAW
Sequences:
>Translated_266_residues MNTIINGITLAYDDHGSGPAVVLVHGFPLCRRMWHPQIKAVTDAGFRLVTLDLRGFGESDAPEGPYSMELFADDVAGLLD YLGINRAVVGGMSMGGYVLFNLVERHAGRLAGAVFITTRATADDEAAKARRLQLAQETMKFGPQIIADAFVPLLFAEESL TGRPKLVEEVGGWIVGTDSRGLAGGLLAMRERKDYSGLLGTVGIPSLAIGAEGDRAAPPETARAIAAGIPGCRLEIVTEA GHMANLEHPGAFNDALVGFLKGLGAW >Mature_266_residues MNTIINGITLAYDDHGSGPAVVLVHGFPLCRRMWHPQIKAVTDAGFRLVTLDLRGFGESDAPEGPYSMELFADDVAGLLD YLGINRAVVGGMSMGGYVLFNLVERHAGRLAGAVFITTRATADDEAAKARRLQLAQETMKFGPQIIADAFVPLLFAEESL TGRPKLVEEVGGWIVGTDSRGLAGGLLAMRERKDYSGLLGTVGIPSLAIGAEGDRAAPPETARAIAAGIPGCRLEIVTEA GHMANLEHPGAFNDALVGFLKGLGAW
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=300, Percent_Identity=25, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 28083; Mature: 28083
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIINGITLAYDDHGSGPAVVLVHGFPLCRRMWHPQIKAVTDAGFRLVTLDLRGFGESD CCCEECCEEEEECCCCCCCEEEEEECCHHHHHHCCCHHEEECCCCEEEEEEEECCCCCCC APEGPYSMELFADDVAGLLDYLGINRAVVGGMSMGGYVLFNLVERHAGRLAGAVFITTRA CCCCCEEHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEC TADDEAAKARRLQLAQETMKFGPQIIADAFVPLLFAEESLTGRPKLVEEVGGWIVGTDSR CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEEECCCC GLAGGLLAMRERKDYSGLLGTVGIPSLAIGAEGDRAAPPETARAIAAGIPGCRLEIVTEA CCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECC GHMANLEHPGAFNDALVGFLKGLGAW CCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNTIINGITLAYDDHGSGPAVVLVHGFPLCRRMWHPQIKAVTDAGFRLVTLDLRGFGESD CCCEECCEEEEECCCCCCCEEEEEECCHHHHHHCCCHHEEECCCCEEEEEEEECCCCCCC APEGPYSMELFADDVAGLLDYLGINRAVVGGMSMGGYVLFNLVERHAGRLAGAVFITTRA CCCCCEEHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEC TADDEAAKARRLQLAQETMKFGPQIIADAFVPLLFAEESLTGRPKLVEEVGGWIVGTDSR CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEEECCCC GLAGGLLAMRERKDYSGLLGTVGIPSLAIGAEGDRAAPPETARAIAAGIPGCRLEIVTEA CCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECC GHMANLEHPGAFNDALVGFLKGLGAW CCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]