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The map label for this gene is rdoA [H]

Identifier: 78221469

GI number: 78221469

Start: 276713

End: 277699

Strand: Direct

Name: rdoA [H]

Synonym: Gmet_0246

Alternate gene names: 78221469

Gene position: 276713-277699 (Clockwise)

Preceding gene: 78221468

Following gene: 78221470

Centisome position: 6.92

GC content: 68.49

Gene sequence:

>987_bases
ATGCCCCACCGCACCCACCCCTTCAGCACCCTTACCCCCGCCTTCATCATGGATGCCGTGGAGAGCCAGGGGTTCGCCTG
CGATTGCCGCACCCTGGCCCTGAACAGCTACGAGAACCGGGTCTATCAGGTGGGGATCGAGGAGGGGGAACCCCTCGTGG
CCAAGTTCTACCGCCCCGGTCGCTGGACCGACGAGCAGATCGTGGAGGAGCACGAGTTCTGCGCCGAACTGGCGGGCCAC
GAGCTTCCCGTGGTGGCCCCCTGGCGCAACGCCGCCGGCCACACACTCTTCCACCACGGCGGGTTCCGCTTCGCCCTCTA
TCCCCGCCAGGGGGGACGGGCGCCGGAGTTCGACAACCTGGACAACCTCCTGGTCCTCGGGCGGATGCTGGGGCGGATGC
ACCGCATCGGCGCCGTTACTCCCTTCGCCCACCGTCCCACCCTGGACAGCCAGAGCTTCGGCCGCGAAAGCGTGGCCCTG
ATCCGGGACCGCTTCATTCCCCCCGACCTGCGGGAGAGCTACGCGGCCGTGACCGGCATGCTCCTGGAGACGGTCGACGC
CACCTTCGCCGAGATGGGGGCGGTCCGGTACCTGCGGACCCACGGCGACTGCCACGCCGGGAACATCCTCTGGCGCGGCG
ACGCCCCTCACTTCGTGGACTTCGACGACGCCCGCATGGCGCCGGCCGTGCAGGACCTCTGGATGATGCTCTCCGGCGAC
CGCCCTCGAAAGCTCGCCCAACTGGATTCTCTGCTGGAGGGGTACACGGAGTTCAACGAGTTCGACTCCCGGGAACTCAG
GCTCATCGAGCCCCTGCGGGCCCTGCGGGTTCTCCACTACAGCGCCTGGCTCGCCCGCCGCTGGGAAGACCCCATCTTTC
CCGCCACCTTCCCCTGGTTCAACACCCCCCGCTACTGGAACGACCAGATCATCGAGCTGCGGGAGCAGGTTGCGGCCCTG
ACGGAGCCCCCCCTGGAGCTTCCCTGA

Upstream 100 bases:

>100_bases
GCCGTTTTTCGCAGGCGGGTGAATCCCTTGGTTGCGTGGGCGATTGGTGGTATGGTGCCGGTGGTTCCATTAATCGCCAT
GTTCAGGAAGTGACAGCCCC

Downstream 100 bases:

>100_bases
ACCATCCCTTTGGGGTGTCGCCGGTTGTGACATCCCTGATTCTGTGTTACAAAAGAGATGAGCCTTGAACCTCCCGATTT
GTATGCGGAAAATAGATAAA

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MPHRTHPFSTLTPAFIMDAVESQGFACDCRTLALNSYENRVYQVGIEEGEPLVAKFYRPGRWTDEQIVEEHEFCAELAGH
ELPVVAPWRNAAGHTLFHHGGFRFALYPRQGGRAPEFDNLDNLLVLGRMLGRMHRIGAVTPFAHRPTLDSQSFGRESVAL
IRDRFIPPDLRESYAAVTGMLLETVDATFAEMGAVRYLRTHGDCHAGNILWRGDAPHFVDFDDARMAPAVQDLWMMLSGD
RPRKLAQLDSLLEGYTEFNEFDSRELRLIEPLRALRVLHYSAWLARRWEDPIFPATFPWFNTPRYWNDQIIELREQVAAL
TEPPLELP

Sequences:

>Translated_328_residues
MPHRTHPFSTLTPAFIMDAVESQGFACDCRTLALNSYENRVYQVGIEEGEPLVAKFYRPGRWTDEQIVEEHEFCAELAGH
ELPVVAPWRNAAGHTLFHHGGFRFALYPRQGGRAPEFDNLDNLLVLGRMLGRMHRIGAVTPFAHRPTLDSQSFGRESVAL
IRDRFIPPDLRESYAAVTGMLLETVDATFAEMGAVRYLRTHGDCHAGNILWRGDAPHFVDFDDARMAPAVQDLWMMLSGD
RPRKLAQLDSLLEGYTEFNEFDSRELRLIEPLRALRVLHYSAWLARRWEDPIFPATFPWFNTPRYWNDQIIELREQVAAL
TEPPLELP
>Mature_327_residues
PHRTHPFSTLTPAFIMDAVESQGFACDCRTLALNSYENRVYQVGIEEGEPLVAKFYRPGRWTDEQIVEEHEFCAELAGHE
LPVVAPWRNAAGHTLFHHGGFRFALYPRQGGRAPEFDNLDNLLVLGRMLGRMHRIGAVTPFAHRPTLDSQSFGRESVALI
RDRFIPPDLRESYAAVTGMLLETVDATFAEMGAVRYLRTHGDCHAGNILWRGDAPHFVDFDDARMAPAVQDLWMMLSGDR
PRKLAQLDSLLEGYTEFNEFDSRELRLIEPLRALRVLHYSAWLARRWEDPIFPATFPWFNTPRYWNDQIIELREQVAALT
EPPLELP

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=49.0853658536585, Blast_Score=305, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 37616; Mature: 37485

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHRTHPFSTLTPAFIMDAVESQGFACDCRTLALNSYENRVYQVGIEEGEPLVAKFYRPG
CCCCCCCCCCCCHHHHHHHHHCCCCEECHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCC
RWTDEQIVEEHEFCAELAGHELPVVAPWRNAAGHTLFHHGGFRFALYPRQGGRAPEFDNL
CCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCH
DNLLVLGRMLGRMHRIGAVTPFAHRPTLDSQSFGRESVALIRDRFIPPDLRESYAAVTGM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHH
LLETVDATFAEMGAVRYLRTHGDCHAGNILWRGDAPHFVDFDDARMAPAVQDLWMMLSGD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEECCCCCHHHHHHHHHHHHHCCC
RPRKLAQLDSLLEGYTEFNEFDSRELRLIEPLRALRVLHYSAWLARRWEDPIFPATFPWF
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NTPRYWNDQIIELREQVAALTEPPLELP
CCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PHRTHPFSTLTPAFIMDAVESQGFACDCRTLALNSYENRVYQVGIEEGEPLVAKFYRPG
CCCCCCCCCCCHHHHHHHHHCCCCEECHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCC
RWTDEQIVEEHEFCAELAGHELPVVAPWRNAAGHTLFHHGGFRFALYPRQGGRAPEFDNL
CCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCH
DNLLVLGRMLGRMHRIGAVTPFAHRPTLDSQSFGRESVALIRDRFIPPDLRESYAAVTGM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHH
LLETVDATFAEMGAVRYLRTHGDCHAGNILWRGDAPHFVDFDDARMAPAVQDLWMMLSGD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEECCCCCHHHHHHHHHHHHHCCC
RPRKLAQLDSLLEGYTEFNEFDSRELRLIEPLRALRVLHYSAWLARRWEDPIFPATFPWF
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NTPRYWNDQIIELREQVAALTEPPLELP
CCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]