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The map label for this gene is 78221468

Identifier: 78221468

GI number: 78221468

Start: 275126

End: 276634

Strand: Direct

Name: 78221468

Synonym: Gmet_0245

Alternate gene names: NA

Gene position: 275126-276634 (Clockwise)

Preceding gene: 78221467

Following gene: 78221469

Centisome position: 6.88

GC content: 68.12

Gene sequence:

>1509_bases
ATGCTCCTCATCCATCCCCCTGTTGCCAAACCCGGCGAGCCCCCCGCCGGCATTGCCCGCCTTGCCGGGGCGCTTCGCGT
CAATGGCCTCCCGTGCCGCGTGCTCGATGCCAACTTGGAGGGGCTCCTCTGGCTCATGGAGCAGCCCGAGCCAGGGACCG
ACACCTGGACCCGTCGGGCTGTGAAGGGGAGGGGAGGCCACTTGGCCGCGCTGCGGGAGCGGCAAACCTACCGTTCCCCC
GACCGTTACGTACGGGCGGTTATGGACCTGAACCGCCTCCTGGCCGTGGCAGGGAAAGAGAATGGGGCCACGGTGGGGCT
CGCGGACTATGAGCAGGCCGACTTTTCGCCGGTCTCCAGCGCCGGTCTCCTCAGGGCAGCGGCGGAGCCGGAGCGCAATC
CCTTCTTCCCCTGGTTCAGCAGGCGCCTCCCGGAGTTGCTGGACGACATCCGGGTCGTAGGTATCTCTCTCAACTACCTG
AGCCAGGCGGTCACCACCTTTGCCCTCATCGGCTTTATCCGGCAGCGGTTTCCGGATCTCACGGTGGTGCTCGGCGGCGG
GCTCGTGACCTCGTGGCTGCGGCGCCCCGCCTGGCGCAACCCCTTCGGCGGTCTCGTGGACCACATGATCGCCGGGCCGG
GGGAAGAGCCCCTCCTGGCCCTCCTCGGCGCCCGTCCGGAATGCCGGCAGCCGCCACTGCCGGCCTACGACCTCCTCCCC
CTTGCCGGCTACCTCTCCCCTGGCCTCGTCCTCCCCTACAGCGCCGCCAGCGGCTGCTGGTGGAACCGCTGCTCCTTTTG
TCCCGAGCGGGCCGAGGGGAACCCGTACCGTCCCATCCCGGCCTCCCAGGCCCTCGACGAGCTGCGGACTCTTGCCGACC
GGTACCGGCCGGCCCTCATCCATCTGTTGGACAACGCGGTCAGCCCCTCACTGTTACGCAGCCTTGCGAACACCCCGCCC
GGCGCGCCGTGGTACGGCTTTGCACGGATTGACGACACCCTGGCTGATTACGATTTCTGCCGGGCACTCAGGCGTTCGGG
GTGCGTCATGCTCAAGTTGGGGCTGGAGTCGGGGGACCAGGGGGTTCTGGACCGGCTCCACAAGGGGATCGATCTGGGGA
CGGCAGGGCGGGTGCTGGAGAACCTGCGGCTTGCGGGAATCGCCGTTTACGGCTACCTCCTCTTCGGCACGCCGGCCGAG
GCGGAGGAGGACGCCCGGCGAACCCTGGATTTTGTGGTTCGCCACCGGGAGGCCATAACCTTTCTCAACCTGGCGGTCTT
CAATATGCCGGCGTTTGGAGATGAGGCCATCGACCACGGGACCGAGCCCTTCTACGGGGGAGACCTTCCCCTCTACACCG
GGTTCCGCCACCCCCGGGGGTGGGGCCGCAGGGAGGTGCGACGTTTCCTGGACCGGGAGTTCACCCGCCACCCCGCCGTG
GCGGAAATTCTCCGCCGGGATCCGCCTCTTTTCACCTCAAACCACGCGCCGTTTTTCGCAGGCGGGTGA

Upstream 100 bases:

>100_bases
CCTGGCCCACTGGCTGGCAGGAAGGTAATCAGCGGTATTAGCCCGGGCGGTCTTCACGGGCCGCCTTGCCTCTCTCTTCA
GTTTCCCCCATAATGGAGCC

Downstream 100 bases:

>100_bases
ATCCCTTGGTTGCGTGGGCGATTGGTGGTATGGTGCCGGTGGTTCCATTAATCGCCATGTTCAGGAAGTGACAGCCCCAT
GCCCCACCGCACCCACCCCT

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Fe-S Oxidoreductase; Radical SAM Family Protein; Radical-SAM Emzyme; Methyltransferase; Radical Sam Domain Protein; Radical SAM Superfamily; Radical SAM

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MLLIHPPVAKPGEPPAGIARLAGALRVNGLPCRVLDANLEGLLWLMEQPEPGTDTWTRRAVKGRGGHLAALRERQTYRSP
DRYVRAVMDLNRLLAVAGKENGATVGLADYEQADFSPVSSAGLLRAAAEPERNPFFPWFSRRLPELLDDIRVVGISLNYL
SQAVTTFALIGFIRQRFPDLTVVLGGGLVTSWLRRPAWRNPFGGLVDHMIAGPGEEPLLALLGARPECRQPPLPAYDLLP
LAGYLSPGLVLPYSAASGCWWNRCSFCPERAEGNPYRPIPASQALDELRTLADRYRPALIHLLDNAVSPSLLRSLANTPP
GAPWYGFARIDDTLADYDFCRALRRSGCVMLKLGLESGDQGVLDRLHKGIDLGTAGRVLENLRLAGIAVYGYLLFGTPAE
AEEDARRTLDFVVRHREAITFLNLAVFNMPAFGDEAIDHGTEPFYGGDLPLYTGFRHPRGWGRREVRRFLDREFTRHPAV
AEILRRDPPLFTSNHAPFFAGG

Sequences:

>Translated_502_residues
MLLIHPPVAKPGEPPAGIARLAGALRVNGLPCRVLDANLEGLLWLMEQPEPGTDTWTRRAVKGRGGHLAALRERQTYRSP
DRYVRAVMDLNRLLAVAGKENGATVGLADYEQADFSPVSSAGLLRAAAEPERNPFFPWFSRRLPELLDDIRVVGISLNYL
SQAVTTFALIGFIRQRFPDLTVVLGGGLVTSWLRRPAWRNPFGGLVDHMIAGPGEEPLLALLGARPECRQPPLPAYDLLP
LAGYLSPGLVLPYSAASGCWWNRCSFCPERAEGNPYRPIPASQALDELRTLADRYRPALIHLLDNAVSPSLLRSLANTPP
GAPWYGFARIDDTLADYDFCRALRRSGCVMLKLGLESGDQGVLDRLHKGIDLGTAGRVLENLRLAGIAVYGYLLFGTPAE
AEEDARRTLDFVVRHREAITFLNLAVFNMPAFGDEAIDHGTEPFYGGDLPLYTGFRHPRGWGRREVRRFLDREFTRHPAV
AEILRRDPPLFTSNHAPFFAGG
>Mature_502_residues
MLLIHPPVAKPGEPPAGIARLAGALRVNGLPCRVLDANLEGLLWLMEQPEPGTDTWTRRAVKGRGGHLAALRERQTYRSP
DRYVRAVMDLNRLLAVAGKENGATVGLADYEQADFSPVSSAGLLRAAAEPERNPFFPWFSRRLPELLDDIRVVGISLNYL
SQAVTTFALIGFIRQRFPDLTVVLGGGLVTSWLRRPAWRNPFGGLVDHMIAGPGEEPLLALLGARPECRQPPLPAYDLLP
LAGYLSPGLVLPYSAASGCWWNRCSFCPERAEGNPYRPIPASQALDELRTLADRYRPALIHLLDNAVSPSLLRSLANTPP
GAPWYGFARIDDTLADYDFCRALRRSGCVMLKLGLESGDQGVLDRLHKGIDLGTAGRVLENLRLAGIAVYGYLLFGTPAE
AEEDARRTLDFVVRHREAITFLNLAVFNMPAFGDEAIDHGTEPFYGGDLPLYTGFRHPRGWGRREVRRFLDREFTRHPAV
AEILRRDPPLFTSNHAPFFAGG

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55437; Mature: 55437

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIHPPVAKPGEPPAGIARLAGALRVNGLPCRVLDANLEGLLWLMEQPEPGTDTWTRRA
CEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHH
VKGRGGHLAALRERQTYRSPDRYVRAVMDLNRLLAVAGKENGATVGLADYEQADFSPVSS
HCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCH
AGLLRAAAEPERNPFFPWFSRRLPELLDDIRVVGISLNYLSQAVTTFALIGFIRQRFPDL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCE
TVVLGGGLVTSWLRRPAWRNPFGGLVDHMIAGPGEEPLLALLGARPECRQPPLPAYDLLP
EEEECCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHH
LAGYLSPGLVLPYSAASGCWWNRCSFCPERAEGNPYRPIPASQALDELRTLADRYRPALI
HHHHCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HLLDNAVSPSLLRSLANTPPGAPWYGFARIDDTLADYDFCRALRRSGCVMLKLGLESGDQ
HHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCH
GVLDRLHKGIDLGTAGRVLENLRLAGIAVYGYLLFGTPAEAEEDARRTLDFVVRHREAIT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
FLNLAVFNMPAFGDEAIDHGTEPFYGGDLPLYTGFRHPRGWGRREVRRFLDREFTRHPAV
HHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHH
AEILRRDPPLFTSNHAPFFAGG
HHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLIHPPVAKPGEPPAGIARLAGALRVNGLPCRVLDANLEGLLWLMEQPEPGTDTWTRRA
CEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHH
VKGRGGHLAALRERQTYRSPDRYVRAVMDLNRLLAVAGKENGATVGLADYEQADFSPVSS
HCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCH
AGLLRAAAEPERNPFFPWFSRRLPELLDDIRVVGISLNYLSQAVTTFALIGFIRQRFPDL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCE
TVVLGGGLVTSWLRRPAWRNPFGGLVDHMIAGPGEEPLLALLGARPECRQPPLPAYDLLP
EEEECCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHH
LAGYLSPGLVLPYSAASGCWWNRCSFCPERAEGNPYRPIPASQALDELRTLADRYRPALI
HHHHCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HLLDNAVSPSLLRSLANTPPGAPWYGFARIDDTLADYDFCRALRRSGCVMLKLGLESGDQ
HHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCH
GVLDRLHKGIDLGTAGRVLENLRLAGIAVYGYLLFGTPAEAEEDARRTLDFVVRHREAIT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
FLNLAVFNMPAFGDEAIDHGTEPFYGGDLPLYTGFRHPRGWGRREVRRFLDREFTRHPAV
HHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHH
AEILRRDPPLFTSNHAPFFAGG
HHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA