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The map label for this gene is 78221441

Identifier: 78221441

GI number: 78221441

Start: 249090

End: 249491

Strand: Direct

Name: 78221441

Synonym: Gmet_0217

Alternate gene names: NA

Gene position: 249090-249491 (Clockwise)

Preceding gene: 78221440

Following gene: 78221442

Centisome position: 6.23

GC content: 54.98

Gene sequence:

>402_bases
ATGAAGCCTGAGACTGCCGAATTGACGAGCAAGGCTGATGCGGACCTTGCCACGGCGCAACGTGAGGCCTCGGTTGATGA
CGCGCCGAATTTCGATGAGGTCTGTTTTCACGCCCAGCAGTGTGCCGAGAAATATCTGAAGGCCATTATGGTGGAGACGG
GCGTGCGCGTACCACGCATCCATGATCTTGAGGCGCTGGTCAATTTGTTGTTCGGGGAATATCCAGGATTGGAGCGGATT
CTGCGCTTCGCCAGAATACTGTCGGCAATGGCGGTTGAGGTCAGGTATCCGGGAATGACGGCTGATGAGGATGATGCTAC
GGAGTCGCTCAAGGCTGCGACGTTGATTCGTGAGGCAGTGCAGGAGATTTTGTGCGGTTCTGGGGATGCTGGAGTTAAAT
AA

Upstream 100 bases:

>100_bases
CCGCTTGATTTGATGGTGCGTACACCGGAGCAGCTCCGGGAACGTTTGGCCAAGCACGATATGCTGCTGACCGAAATTGT
CGACCGCGGCACGGTGCTGT

Downstream 100 bases:

>100_bases
ACTGTCCCCGGAATTCCGCCCCAAGCGGCTCGGGAGGTCCGGGTTGGGTGATTGAGGGAGTGCCCGAACCCTTCAGTCTT
GAGGTGACCGGTGCCAGCGA

Product: HEPN

Products: NA

Alternate protein names: HEPN Domain Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKPETAELTSKADADLATAQREASVDDAPNFDEVCFHAQQCAEKYLKAIMVETGVRVPRIHDLEALVNLLFGEYPGLERI
LRFARILSAMAVEVRYPGMTADEDDATESLKAATLIREAVQEILCGSGDAGVK

Sequences:

>Translated_133_residues
MKPETAELTSKADADLATAQREASVDDAPNFDEVCFHAQQCAEKYLKAIMVETGVRVPRIHDLEALVNLLFGEYPGLERI
LRFARILSAMAVEVRYPGMTADEDDATESLKAATLIREAVQEILCGSGDAGVK
>Mature_133_residues
MKPETAELTSKADADLATAQREASVDDAPNFDEVCFHAQQCAEKYLKAIMVETGVRVPRIHDLEALVNLLFGEYPGLERI
LRFARILSAMAVEVRYPGMTADEDDATESLKAATLIREAVQEILCGSGDAGVK

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14514; Mature: 14514

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPETAELTSKADADLATAQREASVDDAPNFDEVCFHAQQCAEKYLKAIMVETGVRVPRI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HDLEALVNLLFGEYPGLERILRFARILSAMAVEVRYPGMTADEDDATESLKAATLIREAV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
QEILCGSGDAGVK
HHHHCCCCCCCCC
>Mature Secondary Structure
MKPETAELTSKADADLATAQREASVDDAPNFDEVCFHAQQCAEKYLKAIMVETGVRVPRI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HDLEALVNLLFGEYPGLERILRFARILSAMAVEVRYPGMTADEDDATESLKAATLIREAV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
QEILCGSGDAGVK
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA