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The map label for this gene is 78221440

Identifier: 78221440

GI number: 78221440

Start: 248789

End: 249100

Strand: Direct

Name: 78221440

Synonym: Gmet_0216

Alternate gene names: NA

Gene position: 248789-249100 (Clockwise)

Preceding gene: 78221439

Following gene: 78221441

Centisome position: 6.22

GC content: 52.56

Gene sequence:

>312_bases
ATGGCTACTTCAGTTGATATTCAAAATATTTCCAATCAGATTCGCAGGGAGTTCGCACCCCGGAAAATTATCCTGTTCGG
TTCCCATTCTTGGGGTACGCCGTCGGACGATTCGGATGTCGATCTTCTGGTAATTGCGGATTTCGAGGGGAAACCGTGGC
GTTTTGCCGTTGAGATCAGGGAGCGCATCAGAGCCACTATCCCGCTTGATTTGATGGTGCGTACACCGGAGCAGCTCCGG
GAACGTTTGGCCAAGCACGATATGCTGCTGACCGAAATTGTCGACCGCGGCACGGTGCTGTATGAAGCCTGA

Upstream 100 bases:

>100_bases
GAGCCGGTTCTTCGTCCCCTGGGACGAGATCGATGCGACCTTCCGCTTGGCGGCGTGAGGGGAGTTAAACAAGCTGTGCC
GGGAATTTCAGGAGATTCAT

Downstream 100 bases:

>100_bases
GACTGCCGAATTGACGAGCAAGGCTGATGCGGACCTTGCCACGGCGCAACGTGAGGCCTCGGTTGATGACGCGCCGAATT
TCGATGAGGTCTGTTTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase Beta Domain Protein Region; DNA Polymerase Beta Subunit

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MATSVDIQNISNQIRREFAPRKIILFGSHSWGTPSDDSDVDLLVIADFEGKPWRFAVEIRERIRATIPLDLMVRTPEQLR
ERLAKHDMLLTEIVDRGTVLYEA

Sequences:

>Translated_103_residues
MATSVDIQNISNQIRREFAPRKIILFGSHSWGTPSDDSDVDLLVIADFEGKPWRFAVEIRERIRATIPLDLMVRTPEQLR
ERLAKHDMLLTEIVDRGTVLYEA
>Mature_102_residues
ATSVDIQNISNQIRREFAPRKIILFGSHSWGTPSDDSDVDLLVIADFEGKPWRFAVEIRERIRATIPLDLMVRTPEQLRE
RLAKHDMLLTEIVDRGTVLYEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11892; Mature: 11761

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSVDIQNISNQIRREFAPRKIILFGSHSWGTPSDDSDVDLLVIADFEGKPWRFAVEIR
CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEHHHHH
ERIRATIPLDLMVRTPEQLRERLAKHDMLLTEIVDRGTVLYEA
HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure 
ATSVDIQNISNQIRREFAPRKIILFGSHSWGTPSDDSDVDLLVIADFEGKPWRFAVEIR
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEHHHHH
ERIRATIPLDLMVRTPEQLRERLAKHDMLLTEIVDRGTVLYEA
HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA