| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221439
Identifier: 78221439
GI number: 78221439
Start: 248384
End: 248746
Strand: Direct
Name: 78221439
Synonym: Gmet_0215
Alternate gene names: NA
Gene position: 248384-248746 (Clockwise)
Preceding gene: 78221438
Following gene: 78221440
Centisome position: 6.21
GC content: 55.37
Gene sequence:
>363_bases ATGAAACGGGATATAAAGGTTGGAATCAAATCTGACGATGAATTCTTTGCCGAAGCGAGAGAATTCGCCCGCAAGCTGGA TACAGGCTGGAGGCCGGAGCAGCCGGTCGAAAGTCTCTATTTCGAGGATCTGCCGACGCTTCTCAAGTATCTCACTCCGA AGCGGTTCGAGCTGCTCAACACCCTGCACTCCGTGGGGCATGTGAGTATCAACGCCCTGGCAAAGAAACTTCACCGGCAA TACCGCAATGTCTTTGATGATGTGAAGACGCTGGAGCGGCTGGGACTGGTGGAGAAGGACGAGGAGAGCCGGTTCTTCGT CCCCTGGGACGAGATCGATGCGACCTTCCGCTTGGCGGCGTGA
Upstream 100 bases:
>100_bases ACCATCGACACGTTGCGGATGAGGAGCAGCCGTACCAGTTCACAAGCCTGGAAGTGTTGTTTGCCGATTTCGAAAAAGAC GTCAGGGAGGCGATGAAAAA
Downstream 100 bases:
>100_bases GGGGAGTTAAACAAGCTGTGCCGGGAATTTCAGGAGATTCATATGGCTACTTCAGTTGATATTCAAAATATTTCCAATCA GATTCGCAGGGAGTTCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKRDIKVGIKSDDEFFAEAREFARKLDTGWRPEQPVESLYFEDLPTLLKYLTPKRFELLNTLHSVGHVSINALAKKLHRQ YRNVFDDVKTLERLGLVEKDEESRFFVPWDEIDATFRLAA
Sequences:
>Translated_120_residues MKRDIKVGIKSDDEFFAEAREFARKLDTGWRPEQPVESLYFEDLPTLLKYLTPKRFELLNTLHSVGHVSINALAKKLHRQ YRNVFDDVKTLERLGLVEKDEESRFFVPWDEIDATFRLAA >Mature_120_residues MKRDIKVGIKSDDEFFAEAREFARKLDTGWRPEQPVESLYFEDLPTLLKYLTPKRFELLNTLHSVGHVSINALAKKLHRQ YRNVFDDVKTLERLGLVEKDEESRFFVPWDEIDATFRLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14157; Mature: 14157
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDIKVGIKSDDEFFAEAREFARKLDTGWRPEQPVESLYFEDLPTLLKYLTPKRFELLN CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH TLHSVGHVSINALAKKLHRQYRNVFDDVKTLERLGLVEKDEESRFFVPWDEIDATFRLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCEECC >Mature Secondary Structure MKRDIKVGIKSDDEFFAEAREFARKLDTGWRPEQPVESLYFEDLPTLLKYLTPKRFELLN CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH TLHSVGHVSINALAKKLHRQYRNVFDDVKTLERLGLVEKDEESRFFVPWDEIDATFRLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA