| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is recX [H]
Identifier: 78221424
GI number: 78221424
Start: 231896
End: 232363
Strand: Direct
Name: recX [H]
Synonym: Gmet_0200
Alternate gene names: 78221424
Gene position: 231896-232363 (Clockwise)
Preceding gene: 78221423
Following gene: 78221425
Centisome position: 5.8
GC content: 66.67
Gene sequence:
>468_bases ATGGGGGAGGAGCGGAGCGGGTTCAGCCGCGCCCTTGATATTCTCTCCCGGCGTGACCACAGCGAGGCGGAGTTGGCCCT GAAGCTGCGGCGCAAGGGGATCGACGAAAGAGAGATTGCATCAGTCGTGGCCCGCCTGCGGGAGTTGGGGTATCTCAACG ACCGGCGCCTGGCCGAGCGGATAGCGGAAACGGCCATGGCCGGCGGCAGGATGGCGGGACCGCGGCTCAGCCGGGAACTC ATCCGGCGCGGAATCCCCAGGGAGCTTGCGGCCGAGGCCCTGGCCAGGGCCACCGAAGGGCGCGATCTGCGGGATGACAT AAGGGAGATGCTGGCCGGCAAGTTCTCATCCTTCGACCCAAGGGAGGCGGATTTACGGGAGAAACGGCGGGTGGTCGGCT GGTTCCAGCGTCGCGGCTATCCCCTTTCGGCCATCCTGGATGCCCTGCGGGTTTCCGCCGACGAATAA
Upstream 100 bases:
>100_bases CTCTTCCACGTCCGACAGCACGTGGGACAACTTTGTCCACGACGAAGCCCCCCCCGCGGCTGCTGGAGATACGCCCACCG AGGGGATCGAGAAGTTTTAG
Downstream 100 bases:
>100_bases CATTTATCTTTTCAATTCAATCCAGAATACAGAGGAACCGATGACCGGAAACGAACTACGCGCCAGATTCCTGAAATTTT TCGAGGACCGCGGACACACC
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MGEERSGFSRALDILSRRDHSEAELALKLRRKGIDEREIASVVARLRELGYLNDRRLAERIAETAMAGGRMAGPRLSREL IRRGIPRELAAEALARATEGRDLRDDIREMLAGKFSSFDPREADLREKRRVVGWFQRRGYPLSAILDALRVSADE
Sequences:
>Translated_155_residues MGEERSGFSRALDILSRRDHSEAELALKLRRKGIDEREIASVVARLRELGYLNDRRLAERIAETAMAGGRMAGPRLSREL IRRGIPRELAAEALARATEGRDLRDDIREMLAGKFSSFDPREADLREKRRVVGWFQRRGYPLSAILDALRVSADE >Mature_154_residues GEERSGFSRALDILSRRDHSEAELALKLRRKGIDEREIASVVARLRELGYLNDRRLAERIAETAMAGGRMAGPRLSRELI RRGIPRELAAEALARATEGRDLRDDIREMLAGKFSSFDPREADLREKRRVVGWFQRRGYPLSAILDALRVSADE
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 17645; Mature: 17514
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEERSGFSRALDILSRRDHSEAELALKLRRKGIDEREIASVVARLRELGYLNDRRLAER CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH IAETAMAGGRMAGPRLSRELIRRGIPRELAAEALARATEGRDLRDDIREMLAGKFSSFDP HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC READLREKRRVVGWFQRRGYPLSAILDALRVSADE CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure GEERSGFSRALDILSRRDHSEAELALKLRRKGIDEREIASVVARLRELGYLNDRRLAER CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH IAETAMAGGRMAGPRLSRELIRRGIPRELAAEALARATEGRDLRDDIREMLAGKFSSFDP HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC READLREKRRVVGWFQRRGYPLSAILDALRVSADE CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA