Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is yqjF [C]

Identifier: 78221414

GI number: 78221414

Start: 220758

End: 221195

Strand: Direct

Name: yqjF [C]

Synonym: Gmet_0190

Alternate gene names: 78221414

Gene position: 220758-221195 (Clockwise)

Preceding gene: 78221411

Following gene: 78221416

Centisome position: 5.52

GC content: 64.84

Gene sequence:

>438_bases
ATGGCTAGGTCCACCATGGGCGCCACGGCCGATTCCCTGGCGCTCCTCATGATCCGGATACCCCTCGGGGCCATTTTCAT
CGCCCATGGTTCCCAGAAGCTTCTGGGGCTCTTCGGCGGTCACGGCCTCACCGCCACCTTTGCCACCTTCGAGCAGAAGC
TCGGCATTCCGCCGATTCTGACACTCCTGGCAATCATCGCCGAGTTCGGCGGCGGCATCGGGGTTCTCTGCGGTTTCCTC
ACCCGGCTGTCGGGGTTCAGCATCGCCGCCACCATGGCGGTGGCCATCTACAAGGTCAGCTGGGTGAACGGGTTCTTCCT
CAACGGCCCCCGGGGGGACGGCATCGAGTACAACCTGGCGCTCCTCGGCATGGCCCTGTCCCTGGTCCTGATCGGCGGGG
GGGCGTGGTCGGTGGACCGCTATCTTTTCAGACGGTAG

Upstream 100 bases:

>100_bases
CACGTTTTACCGTTGCGGACAGGCGGCATTCTGTGGCAAGAATAGCAGCGGCCGGCAGCGGATAATATTGGCGTCGGCAC
GTCAGCAGCAGGAGGTTTCC

Downstream 100 bases:

>100_bases
TGTGACGCCGCATCCGGACGCAAGCCACCCTAAAAGATCGAGTCTTTCAACTCTCGTATTATCTCCACTTGCCGCTGGAA
GATGTATTGGGAAATCCCCT

Product: DoxX

Products: NA

Alternate protein names: DoxD-Like Family Protein; Membrane DoxD-Like Family Protein; DoxX Subfamily

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPILTLLAIIAEFGGGIGVLCGFL
TRLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLALLGMALSLVLIGGGAWSVDRYLFRR

Sequences:

>Translated_145_residues
MARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPILTLLAIIAEFGGGIGVLCGFL
TRLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLALLGMALSLVLIGGGAWSVDRYLFRR
>Mature_144_residues
ARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPILTLLAIIAEFGGGIGVLCGFLT
RLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLALLGMALSLVLIGGGAWSVDRYLFRR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15220; Mature: 15089

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPIL
CCCCCCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH
TLLAIIAEFGGGIGVLCGFLTRLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLA
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHH
LLGMALSLVLIGGGAWSVDRYLFRR
HHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
ARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPIL
CCCCCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH
TLLAIIAEFGGGIGVLCGFLTRLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLA
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHH
LLGMALSLVLIGGGAWSVDRYLFRR
HHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA