| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yqjF [C]
Identifier: 78221414
GI number: 78221414
Start: 220758
End: 221195
Strand: Direct
Name: yqjF [C]
Synonym: Gmet_0190
Alternate gene names: 78221414
Gene position: 220758-221195 (Clockwise)
Preceding gene: 78221411
Following gene: 78221416
Centisome position: 5.52
GC content: 64.84
Gene sequence:
>438_bases ATGGCTAGGTCCACCATGGGCGCCACGGCCGATTCCCTGGCGCTCCTCATGATCCGGATACCCCTCGGGGCCATTTTCAT CGCCCATGGTTCCCAGAAGCTTCTGGGGCTCTTCGGCGGTCACGGCCTCACCGCCACCTTTGCCACCTTCGAGCAGAAGC TCGGCATTCCGCCGATTCTGACACTCCTGGCAATCATCGCCGAGTTCGGCGGCGGCATCGGGGTTCTCTGCGGTTTCCTC ACCCGGCTGTCGGGGTTCAGCATCGCCGCCACCATGGCGGTGGCCATCTACAAGGTCAGCTGGGTGAACGGGTTCTTCCT CAACGGCCCCCGGGGGGACGGCATCGAGTACAACCTGGCGCTCCTCGGCATGGCCCTGTCCCTGGTCCTGATCGGCGGGG GGGCGTGGTCGGTGGACCGCTATCTTTTCAGACGGTAG
Upstream 100 bases:
>100_bases CACGTTTTACCGTTGCGGACAGGCGGCATTCTGTGGCAAGAATAGCAGCGGCCGGCAGCGGATAATATTGGCGTCGGCAC GTCAGCAGCAGGAGGTTTCC
Downstream 100 bases:
>100_bases TGTGACGCCGCATCCGGACGCAAGCCACCCTAAAAGATCGAGTCTTTCAACTCTCGTATTATCTCCACTTGCCGCTGGAA GATGTATTGGGAAATCCCCT
Product: DoxX
Products: NA
Alternate protein names: DoxD-Like Family Protein; Membrane DoxD-Like Family Protein; DoxX Subfamily
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPILTLLAIIAEFGGGIGVLCGFL TRLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLALLGMALSLVLIGGGAWSVDRYLFRR
Sequences:
>Translated_145_residues MARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPILTLLAIIAEFGGGIGVLCGFL TRLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLALLGMALSLVLIGGGAWSVDRYLFRR >Mature_144_residues ARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPILTLLAIIAEFGGGIGVLCGFLT RLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLALLGMALSLVLIGGGAWSVDRYLFRR
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15220; Mature: 15089
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPIL CCCCCCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH TLLAIIAEFGGGIGVLCGFLTRLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLA HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHH LLGMALSLVLIGGGAWSVDRYLFRR HHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure ARSTMGATADSLALLMIRIPLGAIFIAHGSQKLLGLFGGHGLTATFATFEQKLGIPPIL CCCCCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH TLLAIIAEFGGGIGVLCGFLTRLSGFSIAATMAVAIYKVSWVNGFFLNGPRGDGIEYNLA HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHH LLGMALSLVLIGGGAWSVDRYLFRR HHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA