| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yeiH [C]
Identifier: 78221411
GI number: 78221411
Start: 217180
End: 218112
Strand: Direct
Name: yeiH [C]
Synonym: Gmet_0187
Alternate gene names: 78221411
Gene position: 217180-218112 (Clockwise)
Preceding gene: 78221409
Following gene: 78221414
Centisome position: 5.43
GC content: 60.77
Gene sequence:
>933_bases ATGAACGCAACCAGGCTCCACAAGGTGTTATTCGTCATTCTACTGGCACTGTGCGCTACCCCATGGGTTGGTACTGCCCT GGCGTTGGTCATGGGGATATCCTTCAGTCTGCTGTTGGGGAACCAATGGCCCCGGAAAACCGCCCACTACAGCACAAAGC TGCTGCAGGTCTCGGTCGTCGGACTCGGCTTCGGGCTGGGGCTGGGCGAGGTGCTACAGACCGGGAAAAACTCCATTTGG TATAGCGCCATCGGCATCGCAGGGACCCTCCTGGTGGGCTCTGTCCTGGGCACGCTGTTCCGGACGGACCGCAACACCTC GGCCCTTATTTCGTTCGGCACGGCAATCTGCGGCGGCAGTGCCATCGCGGCCATGGCACCCGTCTTGAAGGCGAAGGATG ACGAAACGGCGGTGGCCTTGGCAACGGTCTTCACCCTGAATTCCGTGGCGCTCCTGCTCTTTCCGTTGATCGGCCGCTGG CTGCAGCTTGACCAGACTATGTTCGGGGTCTGGTCCGGGCTTGCCATCCACGACACCAGCAGTGTTGTTGGTGCCACGTC CGCCTATGGTCCCTTGGCGTTGACCATCGGGACGACGGTCAAGCTGACGAGGGCCATCTGGATCGCACCGGCTGTCATGG CGGTATCGTTGATCAAAGGGGGGAAACAGAGGGCCAGGATTCTTCTGTTCATCGTGGGATTTATCGGTGCCGCAACCATC AGAACAGTACTGCCAATGTTCGGGCAGTACTGGGGAGTGCTGGCTGCTGTCGCCAAACAATGCCTCGTCATGACCTTGTT CATGGTTGGCGCGGGGCTCAGCAGGGAGGTGGTGGGGGCGGTCGGGATAAGGCCCCTCTTGCACGCGGTCACGCTCTGGG GGGTGGTCAGCACGCTTACGCTTGTTGCCCTGAAAGTGGTCGGGCTTGCGTGA
Upstream 100 bases:
>100_bases CCTTATAAAAAATATTGAACATATTGATAGATATTACTCATTTTTTATTATATGCGAGATGGCCTATGATGCAATCAAAA CATGCATCGGGGAGGATGTC
Downstream 100 bases:
>100_bases GCCGGTCATCGGTCCCGAATGGGATCAGAGGCCTTCGTTGCACCACCGTTTCCGGTCCCGTTACGGAGGGATGGTTCAAG GCAGAACGGGTGATGCCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MNATRLHKVLFVILLALCATPWVGTALALVMGISFSLLLGNQWPRKTAHYSTKLLQVSVVGLGFGLGLGEVLQTGKNSIW YSAIGIAGTLLVGSVLGTLFRTDRNTSALISFGTAICGGSAIAAMAPVLKAKDDETAVALATVFTLNSVALLLFPLIGRW LQLDQTMFGVWSGLAIHDTSSVVGATSAYGPLALTIGTTVKLTRAIWIAPAVMAVSLIKGGKQRARILLFIVGFIGAATI RTVLPMFGQYWGVLAAVAKQCLVMTLFMVGAGLSREVVGAVGIRPLLHAVTLWGVVSTLTLVALKVVGLA
Sequences:
>Translated_310_residues MNATRLHKVLFVILLALCATPWVGTALALVMGISFSLLLGNQWPRKTAHYSTKLLQVSVVGLGFGLGLGEVLQTGKNSIW YSAIGIAGTLLVGSVLGTLFRTDRNTSALISFGTAICGGSAIAAMAPVLKAKDDETAVALATVFTLNSVALLLFPLIGRW LQLDQTMFGVWSGLAIHDTSSVVGATSAYGPLALTIGTTVKLTRAIWIAPAVMAVSLIKGGKQRARILLFIVGFIGAATI RTVLPMFGQYWGVLAAVAKQCLVMTLFMVGAGLSREVVGAVGIRPLLHAVTLWGVVSTLTLVALKVVGLA >Mature_310_residues MNATRLHKVLFVILLALCATPWVGTALALVMGISFSLLLGNQWPRKTAHYSTKLLQVSVVGLGFGLGLGEVLQTGKNSIW YSAIGIAGTLLVGSVLGTLFRTDRNTSALISFGTAICGGSAIAAMAPVLKAKDDETAVALATVFTLNSVALLLFPLIGRW LQLDQTMFGVWSGLAIHDTSSVVGATSAYGPLALTIGTTVKLTRAIWIAPAVMAVSLIKGGKQRARILLFIVGFIGAATI RTVLPMFGQYWGVLAAVAKQCLVMTLFMVGAGLSREVVGAVGIRPLLHAVTLWGVVSTLTLVALKVVGLA
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=253, Percent_Identity=27.6679841897233, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 32400; Mature: 32400
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATRLHKVLFVILLALCATPWVGTALALVMGISFSLLLGNQWPRKTAHYSTKLLQVSVV CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEE GLGFGLGLGEVLQTGKNSIWYSAIGIAGTLLVGSVLGTLFRTDRNTSALISFGTAICGGS HHHHHCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCH AIAAMAPVLKAKDDETAVALATVFTLNSVALLLFPLIGRWLQLDQTMFGVWSGLAIHDTS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC SVVGATSAYGPLALTIGTTVKLTRAIWIAPAVMAVSLIKGGKQRARILLFIVGFIGAATI HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RTVLPMFGQYWGVLAAVAKQCLVMTLFMVGAGLSREVVGAVGIRPLLHAVTLWGVVSTLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVALKVVGLA HHHHHHHCCC >Mature Secondary Structure MNATRLHKVLFVILLALCATPWVGTALALVMGISFSLLLGNQWPRKTAHYSTKLLQVSVV CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEE GLGFGLGLGEVLQTGKNSIWYSAIGIAGTLLVGSVLGTLFRTDRNTSALISFGTAICGGS HHHHHCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCH AIAAMAPVLKAKDDETAVALATVFTLNSVALLLFPLIGRWLQLDQTMFGVWSGLAIHDTS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC SVVGATSAYGPLALTIGTTVKLTRAIWIAPAVMAVSLIKGGKQRARILLFIVGFIGAATI HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RTVLPMFGQYWGVLAAVAKQCLVMTLFMVGAGLSREVVGAVGIRPLLHAVTLWGVVSTLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVALKVVGLA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA