| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yfiP [C]
Identifier: 78221403
GI number: 78221403
Start: 208617
End: 209216
Strand: Direct
Name: yfiP [C]
Synonym: Gmet_0179
Alternate gene names: 78221403
Gene position: 208617-209216 (Clockwise)
Preceding gene: 78221402
Following gene: 78221404
Centisome position: 5.22
GC content: 71.0
Gene sequence:
>600_bases ATGGGAACCCGATCGAAGCGAAGCGAGCGGTGCGGCCGCTGCCGCATGCATCTGGAGCGGTGCGTCTGCCCGGCCATCCC CCGGTATGACCTGACGACCCGCGTGGTCCTCGTCATGCACCACCGGGAATACCCGAAGCCCACGGCCACCGGTCCCCTGG CCCTGGCGGCCCTCCCCAACAGCGAGCTCCGCATCCACGGCGAGCGGGACTCCCTCCTGGACCTGGGCGACCTGGCAACT CCGGAGCGCCGGACCCTCCTTCTCTATCCCGGTGACGACGTGCCGGTCCTGACGAGGGAGCTTCTGGAGCGGGACCGCCG CCCCGTCACCCTCGTGGTACCGGACGGCACCTGGCGCCAGGCGTCCCGCATGGGGCGGCGGCTTCCCGGCCTCGACCACG CGGAGATGGTCCGGCTTCCCGAGGGCCTCCCCACCGAGTGGGGCATCCGCCGGGAAAACCACCCCCAGGGGCTCGCCACC TTCGAGGCCATTGCCCGGGCCCTCGGGATCATTGAATCACCGGCAGTCCAGACCGGCCTGGAGGAGCTCTTCCGCCTCAT GGTGCGAAGAACCCTCAGCGCCGGCGGGCGCGCCATTTGA
Upstream 100 bases:
>100_bases CGGTGCCTCGGCCCCGGAAAAGGTCCTTGCCGAGCAGTTCGGCTTCACCCCGCCCCAAGTGGCCCAGCGGGTAAGAGAGC TCGTGGGGCGCTAGAGGATT
Downstream 100 bases:
>100_bases ACCAGACAATTTTTGAAACATACAAGCAACAGAGCAACGGAGTAAAACCTGAGAAAGAATTTTTTTATGTTCTCAACAAC GGCACCCGCATGATTGATGA
Product: DTW
Products: NA
Alternate protein names: DTW Domain Containing Protein; DTW Domain Protein
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MGTRSKRSERCGRCRMHLERCVCPAIPRYDLTTRVVLVMHHREYPKPTATGPLALAALPNSELRIHGERDSLLDLGDLAT PERRTLLLYPGDDVPVLTRELLERDRRPVTLVVPDGTWRQASRMGRRLPGLDHAEMVRLPEGLPTEWGIRRENHPQGLAT FEAIARALGIIESPAVQTGLEELFRLMVRRTLSAGGRAI
Sequences:
>Translated_199_residues MGTRSKRSERCGRCRMHLERCVCPAIPRYDLTTRVVLVMHHREYPKPTATGPLALAALPNSELRIHGERDSLLDLGDLAT PERRTLLLYPGDDVPVLTRELLERDRRPVTLVVPDGTWRQASRMGRRLPGLDHAEMVRLPEGLPTEWGIRRENHPQGLAT FEAIARALGIIESPAVQTGLEELFRLMVRRTLSAGGRAI >Mature_198_residues GTRSKRSERCGRCRMHLERCVCPAIPRYDLTTRVVLVMHHREYPKPTATGPLALAALPNSELRIHGERDSLLDLGDLATP ERRTLLLYPGDDVPVLTRELLERDRRPVTLVVPDGTWRQASRMGRRLPGLDHAEMVRLPEGLPTEWGIRRENHPQGLATF EAIARALGIIESPAVQTGLEELFRLMVRRTLSAGGRAI
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27734779, Length=173, Percent_Identity=31.2138728323699, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22405; Mature: 22274
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRSKRSERCGRCRMHLERCVCPAIPRYDLTTRVVLVMHHREYPKPTATGPLALAALPN CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCCCCCEEEEECCC SELRIHGERDSLLDLGDLATPERRTLLLYPGDDVPVLTRELLERDRRPVTLVVPDGTWRQ CCEEEECCCCCHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHH ASRMGRRLPGLDHAEMVRLPEGLPTEWGIRRENHPQGLATFEAIARALGIIESPAVQTGL HHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH EELFRLMVRRTLSAGGRAI HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GTRSKRSERCGRCRMHLERCVCPAIPRYDLTTRVVLVMHHREYPKPTATGPLALAALPN CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCCCCCEEEEECCC SELRIHGERDSLLDLGDLATPERRTLLLYPGDDVPVLTRELLERDRRPVTLVVPDGTWRQ CCEEEECCCCCHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHH ASRMGRRLPGLDHAEMVRLPEGLPTEWGIRRENHPQGLATFEAIARALGIIESPAVQTGL HHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH EELFRLMVRRTLSAGGRAI HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA