| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is merA [H]
Identifier: 78221401
GI number: 78221401
Start: 205113
End: 206522
Strand: Reverse
Name: merA [H]
Synonym: Gmet_0177
Alternate gene names: 78221401
Gene position: 206522-205113 (Counterclockwise)
Preceding gene: 78221407
Following gene: 78221400
Centisome position: 5.17
GC content: 66.95
Gene sequence:
>1410_bases ATGCCCGACGACACACACGATCTCGTCATCCTCGGCTCCGGCTCCACCGCCTTTGCCGCGGCGCTCAGGGCCCAGTCCTA CGGGACGCGGGTCCTCATGGTGGAAAAGGGGGTGCCGGGCGGCACCTGCATCAACTGGGGGTGCGTCCCAAGCAAGACGC TGATCCATGCCGCGTTATTCTATCAGGAGGGGAAGCTCGGGGCAAGGCTCGGGCTCGGGGAATGCGGCGGGACGGTGGTT CTAGAGCGCCTCATGGCCCGCAAAGATCAGGTGGTGGGGCATCTCCGCCAGACGAAATACCTTGATATCCTCCAGGATGT GCCGGGGCTTCAACTGGTGAAGGGGACCGGCCGCTTCCTAGGGCCCGACCGGCTGGAGGTGGGGGACCGGGAGATCAGGA GCGAGCGGTTTCTGGTGGCCGTGGGGGGGGATCCCCGGGTCCCGCGGATTCCTGGTTTGGAATCGACCCCCTTTCTCACG AGCCGGGGGACTCTCCTCCTCAAGACCATTCCTCAGTCCCTTGTCATCATCGGCGGCGGGGTCATCGCCGTGGAAATGGG GCAGATGTTCCAGCGCCTCGGCGCCAAGGTAACGATCCTGGAGCACGGTCCCCGCATCCTGGGGCCGGTGGAGCCGGAGC CGGCCCTGGCGGTGCGTGACTTTCTGCGGGCGGAGGGAATGAAGATCGTCTGCCGCACCACGATCTGCTTGGCGGCCCAG GACGGGGCCGGGGTGCGCGTGGAGGCGGAACGGGACGGGGAGCGGGTGAGCTTCACCGCCGAAAAGCTCCTCGTGGCGAC GGGAACGGCTCCGGCCACCAACGGGATCGGGCTGGAGCTGGCCGGGGTTGAAACCGACCCGCGGGGGTTCGTGACGGTGG ATGAACGGATGCGGACCACGGCGCCGGGTATCTGGGCCGCCGGCGACTGCACCGGCGGGATGATGATCGCCACGGTCGGC GCCCGGGAAGGGATCGTGGCGGTGGACGACATGCTGAACCCCGGCTGCGGCTGCTCCATGGATTTTTTGAGCGCTCCCAT GGCCATCTTCACCGACCCGGAGGTGGGGATGGTGGGGCACACCGAAGAGGGTGCCAAAGCCGCCGGCTTCGACGTGGTCG TGAATGTGATGCCGGTGGCGGCCATCCCCAAGGCCCACGTCACCGGCCACACAGCCGGGGTCATCAAGATGGTGGCGGAC AAGGCCACGGGCCGTCTCCTGGGGGTGCATCTGGCCTGCCACCGGGGAGCGGACATCATCAACGAGGCAGCCCTGGCCAT CCGCTTCCGGGCCACGGTGGAGGATCTGGCAAACGCGTTGCATGTCTATCCTTCGATGGGGGAGGGCCTGAGGCTCTGCG CCCAGGGATTCAGTAGGGATATCAGCCGGTTGTCGTGCTGTGCCGAATAG
Upstream 100 bases:
>100_bases TAAGTACTGGTGCTGACATGGTGTCCTCCCTGACAATTGTTGTTCAAAGCTTCTCAAACGGCTGCGGTCGGGTACACTTT CTCTCAAAGGAGATCCGACA
Downstream 100 bases:
>100_bases CTGTTCCACACGGATCATGACGGGGCGGGCCATGGAGAGGAGCGCAAAAAGTACACACCTGGACCCTGAATTGTCACGGC GGCTCCACCGGGCCCTCACC
Product: mercuric reductase MerA
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MPDDTHDLVILGSGSTAFAAALRAQSYGTRVLMVEKGVPGGTCINWGCVPSKTLIHAALFYQEGKLGARLGLGECGGTVV LERLMARKDQVVGHLRQTKYLDILQDVPGLQLVKGTGRFLGPDRLEVGDREIRSERFLVAVGGDPRVPRIPGLESTPFLT SRGTLLLKTIPQSLVIIGGGVIAVEMGQMFQRLGAKVTILEHGPRILGPVEPEPALAVRDFLRAEGMKIVCRTTICLAAQ DGAGVRVEAERDGERVSFTAEKLLVATGTAPATNGIGLELAGVETDPRGFVTVDERMRTTAPGIWAAGDCTGGMMIATVG AREGIVAVDDMLNPGCGCSMDFLSAPMAIFTDPEVGMVGHTEEGAKAAGFDVVVNVMPVAAIPKAHVTGHTAGVIKMVAD KATGRLLGVHLACHRGADIINEAALAIRFRATVEDLANALHVYPSMGEGLRLCAQGFSRDISRLSCCAE
Sequences:
>Translated_469_residues MPDDTHDLVILGSGSTAFAAALRAQSYGTRVLMVEKGVPGGTCINWGCVPSKTLIHAALFYQEGKLGARLGLGECGGTVV LERLMARKDQVVGHLRQTKYLDILQDVPGLQLVKGTGRFLGPDRLEVGDREIRSERFLVAVGGDPRVPRIPGLESTPFLT SRGTLLLKTIPQSLVIIGGGVIAVEMGQMFQRLGAKVTILEHGPRILGPVEPEPALAVRDFLRAEGMKIVCRTTICLAAQ DGAGVRVEAERDGERVSFTAEKLLVATGTAPATNGIGLELAGVETDPRGFVTVDERMRTTAPGIWAAGDCTGGMMIATVG AREGIVAVDDMLNPGCGCSMDFLSAPMAIFTDPEVGMVGHTEEGAKAAGFDVVVNVMPVAAIPKAHVTGHTAGVIKMVAD KATGRLLGVHLACHRGADIINEAALAIRFRATVEDLANALHVYPSMGEGLRLCAQGFSRDISRLSCCAE >Mature_468_residues PDDTHDLVILGSGSTAFAAALRAQSYGTRVLMVEKGVPGGTCINWGCVPSKTLIHAALFYQEGKLGARLGLGECGGTVVL ERLMARKDQVVGHLRQTKYLDILQDVPGLQLVKGTGRFLGPDRLEVGDREIRSERFLVAVGGDPRVPRIPGLESTPFLTS RGTLLLKTIPQSLVIIGGGVIAVEMGQMFQRLGAKVTILEHGPRILGPVEPEPALAVRDFLRAEGMKIVCRTTICLAAQD GAGVRVEAERDGERVSFTAEKLLVATGTAPATNGIGLELAGVETDPRGFVTVDERMRTTAPGIWAAGDCTGGMMIATVGA REGIVAVDDMLNPGCGCSMDFLSAPMAIFTDPEVGMVGHTEEGAKAAGFDVVVNVMPVAAIPKAHVTGHTAGVIKMVADK ATGRLLGVHLACHRGADIINEAALAIRFRATVEDLANALHVYPSMGEGLRLCAQGFSRDISRLSCCAE
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=472, Percent_Identity=33.2627118644068, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI50301238, Length=459, Percent_Identity=25.9259259259259, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI148277065, Length=468, Percent_Identity=23.7179487179487, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI33519430, Length=468, Percent_Identity=23.7179487179487, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI33519428, Length=468, Percent_Identity=23.7179487179487, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI33519426, Length=468, Percent_Identity=23.7179487179487, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI148277071, Length=467, Percent_Identity=23.7687366167024, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI22035672, Length=469, Percent_Identity=26.865671641791, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI291045266, Length=464, Percent_Identity=21.7672413793103, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI87081717, Length=455, Percent_Identity=32.967032967033, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1786307, Length=473, Percent_Identity=31.2896405919662, Blast_Score=201, Evalue=6e-53, Organism=Escherichia coli, GI1789915, Length=431, Percent_Identity=28.7703016241299, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI87082354, Length=470, Percent_Identity=25.7446808510638, Blast_Score=136, Evalue=3e-33, Organism=Caenorhabditis elegans, GI32565766, Length=458, Percent_Identity=32.5327510917031, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71983429, Length=358, Percent_Identity=27.3743016759777, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71983419, Length=358, Percent_Identity=27.3743016759777, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17557007, Length=478, Percent_Identity=23.4309623430962, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI71982272, Length=485, Percent_Identity=23.2989690721649, Blast_Score=92, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6321091, Length=469, Percent_Identity=33.4754797441365, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6325240, Length=478, Percent_Identity=26.1506276150628, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6325166, Length=461, Percent_Identity=24.9457700650759, Blast_Score=134, Evalue=3e-32, Organism=Drosophila melanogaster, GI21358499, Length=464, Percent_Identity=33.4051724137931, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI24640549, Length=495, Percent_Identity=26.0606060606061, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24640551, Length=495, Percent_Identity=26.0606060606061, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24640553, Length=495, Percent_Identity=26.0606060606061, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI17737741, Length=501, Percent_Identity=25.9481037924152, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 49393; Mature: 49262
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDDTHDLVILGSGSTAFAAALRAQSYGTRVLMVEKGVPGGTCINWGCVPSKTLIHAALF CCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHH YQEGKLGARLGLGECGGTVVLERLMARKDQVVGHLRQTKYLDILQDVPGLQLVKGTGRFL HCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC GPDRLEVGDREIRSERFLVAVGGDPRVPRIPGLESTPFLTSRGTLLLKTIPQSLVIIGGG CCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEECCC VIAVEMGQMFQRLGAKVTILEHGPRILGPVEPEPALAVRDFLRAEGMKIVCRTTICLAAQ EEEEHHHHHHHHHCCEEEEEECCCEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEEC DGAGVRVEAERDGERVSFTAEKLLVATGTAPATNGIGLELAGVETDPRGFVTVDERMRTT CCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCHHHHC APGIWAAGDCTGGMMIATVGAREGIVAVDDMLNPGCGCSMDFLSAPMAIFTDPEVGMVGH CCCEEECCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCHHHHHCCEEEEECCCCCEECC TEEGAKAAGFDVVVNVMPVAAIPKAHVTGHTAGVIKMVADKATGRLLGVHLACHRGADII CCCCCCCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCHHH NEAALAIRFRATVEDLANALHVYPSMGEGLRLCAQGFSRDISRLSCCAE HHHEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDDTHDLVILGSGSTAFAAALRAQSYGTRVLMVEKGVPGGTCINWGCVPSKTLIHAALF CCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHH YQEGKLGARLGLGECGGTVVLERLMARKDQVVGHLRQTKYLDILQDVPGLQLVKGTGRFL HCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC GPDRLEVGDREIRSERFLVAVGGDPRVPRIPGLESTPFLTSRGTLLLKTIPQSLVIIGGG CCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEECCC VIAVEMGQMFQRLGAKVTILEHGPRILGPVEPEPALAVRDFLRAEGMKIVCRTTICLAAQ EEEEHHHHHHHHHCCEEEEEECCCEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEEC DGAGVRVEAERDGERVSFTAEKLLVATGTAPATNGIGLELAGVETDPRGFVTVDERMRTT CCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCHHHHC APGIWAAGDCTGGMMIATVGAREGIVAVDDMLNPGCGCSMDFLSAPMAIFTDPEVGMVGH CCCEEECCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCHHHHHCCEEEEECCCCCEECC TEEGAKAAGFDVVVNVMPVAAIPKAHVTGHTAGVIKMVADKATGRLLGVHLACHRGADII CCCCCCCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCHHH NEAALAIRFRATVEDLANALHVYPSMGEGLRLCAQGFSRDISRLSCCAE HHHEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037534 [H]