| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221400
Identifier: 78221400
GI number: 78221400
Start: 204287
End: 205081
Strand: Reverse
Name: 78221400
Synonym: Gmet_0176
Alternate gene names: NA
Gene position: 205081-204287 (Counterclockwise)
Preceding gene: 78221401
Following gene: 78221368
Centisome position: 5.13
GC content: 67.55
Gene sequence:
>795_bases ATGGAGAGGAGCGCAAAAAGTACACACCTGGACCCTGAATTGTCACGGCGGCTCCACCGGGCCCTCACCTGCGGCAAGGA GGAGCTCTTCGAGGCAATCCTCGACTCCTCCCCCGAGGTGCTCCGGGCGGCCCTCCGGAACCCCGCCCTGGACGGTAACC ACCTCCTCGCCCTCCTGGGGCGCCGGGACCTGACCGAGGATCTCCTCAGGACCGTGGCTGGGCTTGATACGGTGGCGGGG AACCACAACCTGACCGTGGCCCTGGTCCAGAATCCTGCAACCCCGGCCGGCGTAGCCCTGTCGCTCCTTCCCCGTCTCTA CCTCTTCGAACTCGTTACCCTCAGCGAGCTTCCGGGGACCACTCCCGACCAGCGGCTGGCGGCGGAGCGGGCCATCGTCC AGCGGCTCCCCACCACTCCCCTGGGGAACCGGATCACCCTTGCCCGCCGGGCCAGCGCCTCGGTCCTCGATGCCCTCATG AAGGAGGGGGACGTGCGGGTGGTGGAGCCGTGCCTCGCCAACCCCCGCCTCAAGGAGGCGTCGGTCTTCCAGCTTGTCTC AAGCGCCCGCTCCTCCACCGAGGCCATTGCCGCCGTGGCCCGCCACCAGCGATGGGCGAGCCGCCCCAACCTGAAAATTG CCATGATCAAGAATCCCCGCACTCCCTCGACGGTCTTTGTTTCGCTTCTTGCCGGGGCACCGGCCATGGAACTTCGGAAC CTGGCAGTCTCGGGCCGCCTCGGCCAGGAGCAAAAGCGGCTTATCGGCGAGGAACTCCGGCGCAGGGGATTCTAG
Upstream 100 bases:
>100_bases GAGGGCCTGAGGCTCTGCGCCCAGGGATTCAGTAGGGATATCAGCCGGTTGTCGTGCTGTGCCGAATAGCTGTTCCACAC GGATCATGACGGGGCGGGCC
Downstream 100 bases:
>100_bases GGGTACCACCGTCGCACGACAAAGGTCTTCTCTCCCCTCCCGTTTTTCTCCGCGAACCGATCCACAGGCACCCTCTTTCC CATCACCTCGGACAGAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MERSAKSTHLDPELSRRLHRALTCGKEELFEAILDSSPEVLRAALRNPALDGNHLLALLGRRDLTEDLLRTVAGLDTVAG NHNLTVALVQNPATPAGVALSLLPRLYLFELVTLSELPGTTPDQRLAAERAIVQRLPTTPLGNRITLARRASASVLDALM KEGDVRVVEPCLANPRLKEASVFQLVSSARSSTEAIAAVARHQRWASRPNLKIAMIKNPRTPSTVFVSLLAGAPAMELRN LAVSGRLGQEQKRLIGEELRRRGF
Sequences:
>Translated_264_residues MERSAKSTHLDPELSRRLHRALTCGKEELFEAILDSSPEVLRAALRNPALDGNHLLALLGRRDLTEDLLRTVAGLDTVAG NHNLTVALVQNPATPAGVALSLLPRLYLFELVTLSELPGTTPDQRLAAERAIVQRLPTTPLGNRITLARRASASVLDALM KEGDVRVVEPCLANPRLKEASVFQLVSSARSSTEAIAAVARHQRWASRPNLKIAMIKNPRTPSTVFVSLLAGAPAMELRN LAVSGRLGQEQKRLIGEELRRRGF >Mature_264_residues MERSAKSTHLDPELSRRLHRALTCGKEELFEAILDSSPEVLRAALRNPALDGNHLLALLGRRDLTEDLLRTVAGLDTVAG NHNLTVALVQNPATPAGVALSLLPRLYLFELVTLSELPGTTPDQRLAAERAIVQRLPTTPLGNRITLARRASASVLDALM KEGDVRVVEPCLANPRLKEASVFQLVSSARSSTEAIAAVARHQRWASRPNLKIAMIKNPRTPSTVFVSLLAGAPAMELRN LAVSGRLGQEQKRLIGEELRRRGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28784; Mature: 28784
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSAKSTHLDPELSRRLHRALTCGKEELFEAILDSSPEVLRAALRNPALDGNHLLALLG CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHC RRDLTEDLLRTVAGLDTVAGNHNLTVALVQNPATPAGVALSLLPRLYLFELVTLSELPGT CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TPDQRLAAERAIVQRLPTTPLGNRITLARRASASVLDALMKEGDVRVVEPCLANPRLKEA CCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEECHHHCCCCCCHH SVFQLVSSARSSTEAIAAVARHQRWASRPNLKIAMIKNPRTPSTVFVSLLAGAPAMELRN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHH LAVSGRLGQEQKRLIGEELRRRGF HHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MERSAKSTHLDPELSRRLHRALTCGKEELFEAILDSSPEVLRAALRNPALDGNHLLALLG CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHC RRDLTEDLLRTVAGLDTVAGNHNLTVALVQNPATPAGVALSLLPRLYLFELVTLSELPGT CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TPDQRLAAERAIVQRLPTTPLGNRITLARRASASVLDALMKEGDVRVVEPCLANPRLKEA CCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEECHHHCCCCCCHH SVFQLVSSARSSTEAIAAVARHQRWASRPNLKIAMIKNPRTPSTVFVSLLAGAPAMELRN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHH LAVSGRLGQEQKRLIGEELRRRGF HHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA