| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221399
Identifier: 78221399
GI number: 78221399
Start: 203391
End: 204290
Strand: Direct
Name: 78221399
Synonym: Gmet_0175
Alternate gene names: NA
Gene position: 203391-204290 (Clockwise)
Preceding gene: 78221398
Following gene: 78221402
Centisome position: 5.09
GC content: 65.67
Gene sequence:
>900_bases ATGTCTCGCTGGTTGAAGGCCGCAGCCGCGGCCTTTCTCATGCTGCTGAGTACGACCGTGGCCCGGGCAGGCGATGCGCA GCACTACGCAGTGGCAGAGTTGCCGACGCCGGTGCTCAACACCCCGGATTTTCCCCGCGTATTCGGCGGCCAGGACGGCA GGACCGTCAAAACCGACCACCAGGGACAGATCCGAGAACTAGAGTTCATCGCCCTGCCGGGGGCAGCCTTTACGGTGCAG GAGACGCTCCGCAGGGGGGGATCGGTGGTCCACCGGGTCACCACCGACGACTACCCCTACCCGACCACGACAGGCTACTT TGTGGATGCCCGCTTCGTACGGCTCACGGACGAAACGCCCCATCCCCGTGCCCGGAAACTTCCTTCCCGCAACAAGATCA TCACCCGACTCCTGGCGGCCCGGGGAAGCCGTTACGTCTGGGGAGGAAACGTCCGTGCGGGGGTGCCGGATATGATCCGC CTCTTTCCCCCGGCGGGAAAACTCTCCGCCGAGACGGAGCGCCGCTGGCTGCTGCAAGGGCTCGACTGCTCGGGGCTCCT CTACGAGGCCACCGACGGCGTCACCCCCCGCAACACGAGCGCCCTTGCTGGCTACGGCCGGGGGGTGCCCATTGCCGGGC TCTCTACAGAAGAGATCCGCCAGCAACTGGAGCCCCTGGACCTCATCGTCTGGAAGGGACACGTGATTATCGTCCTTGAC CGGGAGCGGACCATCGAGAGCCGACTCGGCCCGGTGCCGGGAAAGCGGGACGGTGTGGCCGTGAGGCCGCTGCGGGATGT TCTGTCCGAGGTGATGGGAAAGAGGGTGCCTGTGGATCGGTTCGCGGAGAAAAACGGGAGGGGAGAGAAGACCTTTGTCG TGCGACGGTGGTACCCCTAG
Upstream 100 bases:
>100_bases ACCAACGGGTACGCGTCGCTTCCTCGTTCGCTTGCGCCTAGCATCCCGGCCTCCTCATCACGTTTTGCAAATGCCTCACG TAGCAACGAAAGGAATTGTC
Downstream 100 bases:
>100_bases AATCCCCTGCGCCGGAGTTCCTCGCCGATAAGCCGCTTTTGCTCCTGGCCGAGGCGGCCCGAGACTGCCAGGTTCCGAAG TTCCATGGCCGGTGCCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDHQGQIRELEFIALPGAAFTVQ ETLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETPHPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIR LFPPAGKLSAETERRWLLQGLDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLD RERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP
Sequences:
>Translated_299_residues MSRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDHQGQIRELEFIALPGAAFTVQ ETLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETPHPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIR LFPPAGKLSAETERRWLLQGLDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLD RERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP >Mature_298_residues SRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDHQGQIRELEFIALPGAAFTVQE TLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETPHPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIRL FPPAGKLSAETERRWLLQGLDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLDR ERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33206; Mature: 33074
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDH CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHCCCCCCCEEECCC QGQIRELEFIALPGAAFTVQETLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETP CCCEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCC HPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIRLFPPAGKLSAETERRWLLQG CCHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHC LDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLD CCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCEEEEEEC RERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP CCHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEECCC >Mature Secondary Structure SRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDH CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHCCCCCCCEEECCC QGQIRELEFIALPGAAFTVQETLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETP CCCEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCC HPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIRLFPPAGKLSAETERRWLLQG CCHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHC LDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLD CCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCEEEEEEC RERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP CCHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA