| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ypeB [H]
Identifier: 78221373
GI number: 78221373
Start: 175545
End: 175769
Strand: Direct
Name: ypeB [H]
Synonym: Gmet_0146
Alternate gene names: 78221373
Gene position: 175545-175769 (Clockwise)
Preceding gene: 78221372
Following gene: 78221374
Centisome position: 4.39
GC content: 57.78
Gene sequence:
>225_bases ATGGAACAGTATCCTTCCAATGACCACGAACAGCTGCTGGAACTGGCCACCATGCGGATGCCCTTTGGCAAATATCAGGG GCGCCGCCTCATCGATCTGCCGGAGCCCTATGTCGTCTGGTTTGCCGGGCAGGGCTTTCCCGAAGGGAAGCTGGGCACCA TGCTGCGCGCCGTCTATGAAATCAAGGTAAACGGGCTCGAATATCTGTTCGACCGGTTGCGGTGA
Upstream 100 bases:
>100_bases CATGAATGTCAATAAACAGTTGCGGATCAAGGCGCCGAAACGGTTGCCGCCGCTCATCGGGCAGCAGGAATTTCCTCTCT GATCCCCCATAAAGGAAACA
Downstream 100 bases:
>100_bases CGTTGCCGAGCGGCGACAGAACCGGGCCAAACCACCGCCACGGAGACTCCCCATGACCAACAAGACCATCGACCCCTCCG GCCTCGTCCCCCCCGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MEQYPSNDHEQLLELATMRMPFGKYQGRRLIDLPEPYVVWFAGQGFPEGKLGTMLRAVYEIKVNGLEYLFDRLR
Sequences:
>Translated_74_residues MEQYPSNDHEQLLELATMRMPFGKYQGRRLIDLPEPYVVWFAGQGFPEGKLGTMLRAVYEIKVNGLEYLFDRLR >Mature_74_residues MEQYPSNDHEQLLELATMRMPFGKYQGRRLIDLPEPYVVWFAGQGFPEGKLGTMLRAVYEIKVNGLEYLFDRLR
Specific function: Unknown
COG id: COG3530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082098, Length=68, Percent_Identity=52.9411764705882, Blast_Score=72, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8724; Mature: 8724
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQYPSNDHEQLLELATMRMPFGKYQGRRLIDLPEPYVVWFAGQGFPEGKLGTMLRAVYE CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHH IKVNGLEYLFDRLR HHCCCHHHHHHHCC >Mature Secondary Structure MEQYPSNDHEQLLELATMRMPFGKYQGRRLIDLPEPYVVWFAGQGFPEGKLGTMLRAVYE CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHH IKVNGLEYLFDRLR HHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]