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The map label for this gene is yggU [C]

Identifier: 78221372

GI number: 78221372

Start: 175224

End: 175526

Strand: Direct

Name: yggU [C]

Synonym: Gmet_0145

Alternate gene names: 78221372

Gene position: 175224-175526 (Clockwise)

Preceding gene: 78221371

Following gene: 78221373

Centisome position: 4.38

GC content: 55.45

Gene sequence:

>303_bases
GTGAAGAAACCTTTTTATACATGGGATGGTGATACCCTGGTGCTTAATATCCTCGGCACGCCCAATGCCAAACGGGACGC
CATCGGCAAGGTGAAGGGTCACCAGCTCTGTGTTAGTGTGACGGCTATCCCCCGCGCCGGGCGGGCGACCGACCATATGG
TACGATTTCTGGCTGACGAATTCGGCGTATCGGTCGGAGATATTCAGGTTGTGTTCGGGCGCATGAATGTCAATAAACAG
TTGCGGATCAAGGCGCCGAAACGGTTGCCGCCGCTCATCGGGCAGCAGGAATTTCCTCTCTGA

Upstream 100 bases:

>100_bases
CGGTGAAGAAGTTCTACCAGCGCACCATCGACGGGCTGGTGGATCTGGCAGGGAGCGGGTGGAAGAGGCTGACGGGGTGG
TAACCTGCGCCGGAGGAATG

Downstream 100 bases:

>100_bases
TCCCCCATAAAGGAAACAATGGAACAGTATCCTTCCAATGACCACGAACAGCTGCTGGAACTGGCCACCATGCGGATGCC
CTTTGGCAAATATCAGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MKKPFYTWDGDTLVLNILGTPNAKRDAIGKVKGHQLCVSVTAIPRAGRATDHMVRFLADEFGVSVGDIQVVFGRMNVNKQ
LRIKAPKRLPPLIGQQEFPL

Sequences:

>Translated_100_residues
MKKPFYTWDGDTLVLNILGTPNAKRDAIGKVKGHQLCVSVTAIPRAGRATDHMVRFLADEFGVSVGDIQVVFGRMNVNKQ
LRIKAPKRLPPLIGQQEFPL
>Mature_100_residues
MKKPFYTWDGDTLVLNILGTPNAKRDAIGKVKGHQLCVSVTAIPRAGRATDHMVRFLADEFGVSVGDIQVVFGRMNVNKQ
LRIKAPKRLPPLIGQQEFPL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=88, Percent_Identity=35.2272727272727, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 11098; Mature: 11098

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPFYTWDGDTLVLNILGTPNAKRDAIGKVKGHQLCVSVTAIPRAGRATDHMVRFLADE
CCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
FGVSVGDIQVVFGRMNVNKQLRIKAPKRLPPLIGQQEFPL
HCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKPFYTWDGDTLVLNILGTPNAKRDAIGKVKGHQLCVSVTAIPRAGRATDHMVRFLADE
CCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
FGVSVGDIQVVFGRMNVNKQLRIKAPKRLPPLIGQQEFPL
HCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA